MC11g0881.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0881.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-H2 finger protein ATL60-like
Location	MC11: 7482949 .. 7483503 (-)
Sequence length	555
RNA-Seq Expression	MC11g0881.1
Synteny	MC11g0881.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCATTACTCACTCTCCTCTTCCCAATGGAAACCTTAGTTCCCGAATCGCCGTCTCCCCCAATCGTCCACTACACCATAACCCTCGACCTCCCGACCTCCATACTCTTCTCCTTCACCGTGATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAACGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCACGGCGGCGCCGGGGACGTGGAGCTCGGGGAGGCCGGGTCTTCGTTCTTCCAGGCGGTGGCGCAGAACAACGCGTGGGTTGTGGGGGCGGTTGAGCGGGCGGTGGAGCGGGTGGTGGCGAAGCTGGAGGAGCGGCGGGTGCGGCGGCCAGAGAGACTGCCGCCGGTGGTGAGATTCGGGAGCGAGAAGATGAGGAGGAGGAGCGAGAATGAGGAGTGCGCCATTTGTTTGGAGGAGTTTCTGGCCGGAGAAATTTGCCAGGCCTTGCCGGAATGCAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTCAGGAAGAAATTCACCTGCCCCGTTTGTCGTAATTGTATTTCAGCT

mRNA sequence

ATGGCGGACCCATTACTCACTCTCCTCTTCCCAATGGAAACCTTAGTTCCCGAATCGCCGTCTCCCCCAATCGTCCACTACACCATAACCCTCGACCTCCCGACCTCCATACTCTTCTCCTTCACCGTGATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAACGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCACGGCGGCGCCGGGGACGTGGAGCTCGGGGAGGCCGGGTCTTCGTTCTTCCAGGCGGTGGCGCAGAACAACGCGTGGGTTGTGGGGGCGGTTGAGCGGGCGGTGGAGCGGGTGGTGGCGAAGCTGGAGGAGCGGCGGGTGCGGCGGCCAGAGAGACTGCCGCCGGTGGTGAGATTCGGGAGCGAGAAGATGAGGAGGAGGAGCGAGAATGAGGAGTGCGCCATTTGTTTGGAGGAGTTTCTGGCCGGAGAAATTTGCCAGGCCTTGCCGGAATGCAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTCAGGAAGAAATTCACCTGCCCCGTTTGTCGTAATTGTATTTCAGCT

Coding sequence (CDS)

ATGGCGGACCCATTACTCACTCTCCTCTTCCCAATGGAAACCTTAGTTCCCGAATCGCCGTCTCCCCCAATCGTCCACTACACCATAACCCTCGACCTCCCGACCTCCATACTCTTCTCCTTCACCGTGATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAACGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCACGGCGGCGCCGGGGACGTGGAGCTCGGGGAGGCCGGGTCTTCGTTCTTCCAGGCGGTGGCGCAGAACAACGCGTGGGTTGTGGGGGCGGTTGAGCGGGCGGTGGAGCGGGTGGTGGCGAAGCTGGAGGAGCGGCGGGTGCGGCGGCCAGAGAGACTGCCGCCGGTGGTGAGATTCGGGAGCGAGAAGATGAGGAGGAGGAGCGAGAATGAGGAGTGCGCCATTTGTTTGGAGGAGTTTCTGGCCGGAGAAATTTGCCAGGCCTTGCCGGAATGCAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTCAGGAAGAAATTCACCTGCCCCGTTTGTCGTAATTGTATTTCAGCT

Protein sequence

MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

Homology

[Close]

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.5e-13
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M     +EEC ICL +F++GE  + LP+CNH FH  CID W ++  TC
Sbjct: 115 RMFPVVSY-SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTC 174

Query: 177 PVCRNCI 184
           P CRNC+
Sbjct: 175 PKCRNCL 180

[Close]

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M      EEC ICL +F++GE  + LP+CNH FH  CID W +   TC
Sbjct: 115 RMFPVVSY-SREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTC 174

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 175 PKCRHCL 180

[Close]

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           ++ PVV + S ++      EEC ICL +F+AGE  + LP+CNH FH  CID W  +  TC
Sbjct: 110 KMLPVVNY-SPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTC 169

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 170 PKCRHCL 175

[Close]

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.9e-12
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 120 PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVC 179
           P+V F  +  +   +  EC+ICL E + G+  + LP+CNH FH +CID+WF+   TCP+C
Sbjct: 112 PIVFFRQDSCK---DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPIC 171

Query: 180 RNCI 184
           RN +
Sbjct: 172 RNTV 172

[Close]

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot
Match: Q94BY6 (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M      EEC ICL +F++GE  + LP+C+H FH  CID W ++  TC
Sbjct: 116 RMFPVVSY-SPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTC 175

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 176 PKCRHCL 181

[Close]

BLAST of MC11g0881.1 vs. NCBI nr
Match: XP_022139402.1 (RING-H2 finger protein ATL60-like [Momordica charantia])

HSP 1 Score: 372 bits (954), Expect = 7.90e-130
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW
Sbjct: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP 120
           FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP
Sbjct: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP 120

Query: 121 VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR 180
           VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR
Sbjct: 121 VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR 180

Query: 181 NCISA 185
           NCISA
Sbjct: 181 NCISA 185

[Close]

BLAST of MC11g0881.1 vs. NCBI nr
Match: XP_031740449.1 (RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 7.00e-77
Identity = 122/189 (64.55%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPESPSPP++HYT+TLD+ TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERL 120
           FLDVR  G G  DVE                               A  EERR++R E+L
Sbjct: 61  FLDVRRNGGGGEDVE------------------------------AAMAEERRLKRAEKL 120

Query: 121 P--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 180
           P  P VRFGSEKM RR   EECAICLEEFL GE CQALPECNHFFHS+CIDVWF KKFTC
Sbjct: 121 PLPPTVRFGSEKMVRRRSEEECAICLEEFLIGENCQALPECNHFFHSECIDVWFSKKFTC 159

Query: 181 PVCRNCISA 185
           P+CRNC++A
Sbjct: 181 PICRNCVAA 159

[Close]

BLAST of MC11g0881.1 vs. NCBI nr
Match: XP_008453063.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo] >TYK20253.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (597), Expect = 8.14e-76
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP- 120
           FLDVR  G GD +                          VE  +A  EERR++R E+LP 
Sbjct: 61  FLDVRRSGGGDED--------------------------VEAAMA--EERRMKRAEKLPL 120

Query: 121 -PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPV 180
            P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+
Sbjct: 121 PPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPI 159

Query: 181 CRNCISA 185
           CRNC++A
Sbjct: 181 CRNCVAA 159

[Close]

BLAST of MC11g0881.1 vs. NCBI nr
Match: KAA0064334.1 (RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (597), Expect = 2.98e-75
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 40  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 99

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP- 120
           FLDVR  G GD +                          VE  +A  EERR++R E+LP 
Sbjct: 100 FLDVRRSGGGDED--------------------------VEAAMA--EERRMKRAEKLPL 159

Query: 121 -PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPV 180
            P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+
Sbjct: 160 PPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPI 198

Query: 181 CRNCISA 185
           CRNC++A
Sbjct: 220 CRNCVAA 198

[Close]

BLAST of MC11g0881.1 vs. NCBI nr
Match: XP_022976597.1 (RING-H2 finger protein ATL39-like [Cucurbita maxima])

HSP 1 Score: 226 bits (577), Expect = 7.62e-73
Identity = 121/186 (65.05%), Postives = 134/186 (72.04%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPP-IVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQ 60
           MADPLLTLLFPMET+V ES SPP IVHYT+TLDL TSI+FS T+ILFFLFL+HVL+GFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVIVHYTVTLDLRTSIIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP 120
           WFL  R GG  DVE G                                EERRVRR E++P
Sbjct: 61  WFLSGRRGG--DVEAGMG------------------------------EERRVRRAEKMP 120

Query: 121 PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVC 180
             VRFGSE+M RR   EECAICLEEF+AGE CQALPECNHFFHSDCIDVWF KKFTCP+C
Sbjct: 121 AAVRFGSERMVRRRSEEECAICLEEFMAGENCQALPECNHFFHSDCIDVWFSKKFTCPIC 154

Query: 181 RNCISA 185
           R+CI+A
Sbjct: 181 RHCIAA 154

[Close]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL
Match: A0A6J1CDV3 (RING-H2 finger protein ATL60-like OS=Momordica charantia OX=3673 GN=LOC111010341 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 3.83e-130
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW
Sbjct: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP 120
           FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP
Sbjct: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLPP 120

Query: 121 VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR 180
           VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR
Sbjct: 121 VVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCR 180

Query: 181 NCISA 185
           NCISA
Sbjct: 181 NCISA 185

[Close]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL
Match: A0A0A0L062 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 3.39e-77
Identity = 122/189 (64.55%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPESPSPP++HYT+TLD+ TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERL 120
           FLDVR  G G  DVE                               A  EERR++R E+L
Sbjct: 61  FLDVRRNGGGGEDVE------------------------------AAMAEERRLKRAEKL 120

Query: 121 P--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 180
           P  P VRFGSEKM RR   EECAICLEEFL GE CQALPECNHFFHS+CIDVWF KKFTC
Sbjct: 121 PLPPTVRFGSEKMVRRRSEEECAICLEEFLIGENCQALPECNHFFHSECIDVWFSKKFTC 159

Query: 181 PVCRNCISA 185
           P+CRNC++A
Sbjct: 181 PICRNCVAA 159

[Close]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL
Match: A0A5D3D9M0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003920 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 3.94e-76
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP- 120
           FLDVR  G GD +                          VE  +A  EERR++R E+LP 
Sbjct: 61  FLDVRRSGGGDED--------------------------VEAAMA--EERRMKRAEKLPL 120

Query: 121 -PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPV 180
            P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+
Sbjct: 121 PPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPI 159

Query: 181 CRNCISA 185
           CRNC++A
Sbjct: 181 CRNCVAA 159

[Close]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL
Match: A0A1S3BVC7 (RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 3.94e-76
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP- 120
           FLDVR  G GD +                          VE  +A  EERR++R E+LP 
Sbjct: 61  FLDVRRSGGGDED--------------------------VEAAMA--EERRMKRAEKLPL 120

Query: 121 -PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPV 180
            P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+
Sbjct: 121 PPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPI 159

Query: 181 CRNCISA 185
           CRNC++A
Sbjct: 181 CRNCVAA 159

[Close]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL
Match: A0A5A7VAT0 (RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00330 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.44e-75
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQW 60
           M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQW
Sbjct: 40  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 99

Query: 61  FLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEERRVRRPERLP- 120
           FLDVR  G GD +                          VE  +A  EERR++R E+LP 
Sbjct: 100 FLDVRRSGGGDED--------------------------VEAAMA--EERRMKRAEKLPL 159

Query: 121 -PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPV 180
            P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+
Sbjct: 160 PPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPI 198

Query: 181 CRNCISA 185
           CRNC++A
Sbjct: 220 CRNCVAA 198

[Close]

BLAST of MC11g0881.1 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M     +EEC ICL +F++GE  + LP+CNH FH  CID W ++  TC
Sbjct: 115 RMFPVVSY-SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTC 174

Query: 177 PVCRNCI 184
           P CRNC+
Sbjct: 175 PKCRNCL 180

[Close]

BLAST of MC11g0881.1 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M      EEC ICL +F++GE  + LP+CNH FH  CID W +   TC
Sbjct: 115 RMFPVVSY-SREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTC 174

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 175 PKCRHCL 180

[Close]

BLAST of MC11g0881.1 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           ++ PVV + S ++      EEC ICL +F+AGE  + LP+CNH FH  CID W  +  TC
Sbjct: 110 KMLPVVNY-SPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTC 169

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 170 PKCRHCL 175

[Close]

BLAST of MC11g0881.1 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-13
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 120 PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVC 179
           P+V F  +  +   +  EC+ICL E + G+  + LP+CNH FH +CID+WF+   TCP+C
Sbjct: 112 PIVFFRQDSCK---DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPIC 171

Query: 180 RNCI 184
           RN +
Sbjct: 172 RNTV 172

[Close]

BLAST of MC11g0881.1 vs. TAIR 10
Match: AT1G49200.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 7.3e-13
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 117 RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTC 176
           R+ PVV + S +M      EEC ICL +F++GE  + LP+C+H FH  CID W ++  TC
Sbjct: 116 RMFPVVSY-SPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTC 175

Query: 177 PVCRNCI 184
           P CR+C+
Sbjct: 176 PKCRHCL 181

The following BLAST results are available for this feature:

BLAST of MC11g0881.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C034	5.5e-13	49.25	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q6NML0	3.5e-12	47.76	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ...	[more]
Q9LS99	4.6e-12	46.27	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]
Q9XF63	7.9e-12	43.75	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]
Q94BY6	1.0e-11	46.27	RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1	[more]

BLAST of MC11g0881.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139402.1	7.90e-130	100.00	RING-H2 finger protein ATL60-like [Momordica charantia]	[more]
XP_031740449.1	7.00e-77	64.55	RING-H2 finger protein ATL39-like [Cucumis sativus]	[more]
XP_008453063.1	8.14e-76	64.17	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo] >TYK20253.1 RING-H2 ...	[more]
KAA0064334.1	2.98e-75	64.17	RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]	[more]
XP_022976597.1	7.62e-73	65.05	RING-H2 finger protein ATL39-like [Cucurbita maxima]	[more]

BLAST of MC11g0881.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDV3	3.83e-130	100.00	RING-H2 finger protein ATL60-like OS=Momordica charantia OX=3673 GN=LOC111010341...	[more]
A0A0A0L062	3.39e-77	64.55	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 P...	[more]
A0A5D3D9M0	3.94e-76	64.17	RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BVC7	3.94e-76	64.17	RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 S...	[more]
A0A5A7VAT0	1.44e-75	64.17	RING-H2 finger protein ATL39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of MC11g0881.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49220.1	3.9e-14	49.25	RING/U-box superfamily protein	[more]
AT1G49210.1	2.5e-13	47.76	RING/U-box superfamily protein	[more]
AT3G18773.1	3.3e-13	46.27	RING/U-box superfamily protein	[more]
AT1G72310.1	5.6e-13	43.75	RING/U-box superfamily protein	[more]
AT1G49200.1	7.3e-13	46.27	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 138..179 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 137..180 e-value: 2.2E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 138..180 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 96..184 e-value: 2.4E-19 score: 70.8
None	No IPR available	PANTHER	PTHR45798:SF50	SUBFAMILY NOT NAMED	coord: 28..183
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 28..183
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 137..180 e-value: 9.70434E-16 score: 65.7861
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 133..183

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0881	MC11g0881	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0881.1-cds	MC11g0881.1-cds-MC11:7482949..7483503	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0881.1	MC11g0881.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane