MC11g0844.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0844.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RAB GTPase
Location	MC11: 7203271 .. 7206319 (+)
Sequence length	1655
RNA-Seq Expression	MC11g0844.1
Synteny	MC11g0844.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTATTAGAGTAGAGGCAAGCAAAAACCAATTCCTAAAAATTGGCTGAGTTCGCCTTCGTTTAAAACTATATAGATAAACAGAAAACGGAATGGGGCGAGGCGAGTATTCCCTCATCTCAACTCGTTATTATATCAAAATTCAGGAACAACCGAGATCATTTAACCCTAAAATTTTCGAAAATTTTAATAATAAAGGTAATAGTCGAAAGCCCAAGCCCAAGCCCAAGCCTAAGCCCATTGTTAGGAAGCCGAAGCCCATTAAGGAGCCCAGTCCAAGACGCGCATAGCGAAATCCGTTTCCGATGAAACGTAACGCGTGATCGTCTTCAACAAATTTCAAAACCTTTCTCTCTCTGCGTTTCTCTCTCTCATGCCTTGGAGCTCCACCTCCTGATCCGTTTTCAGACCCATCGAATTCCGTGGAAAACCAGAGGCATCGGATCCGACCTGATTAAGTATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGGTTCTTACACTTCCCTCATTCTGTTCCATTCTCGCATTGTCTTCGTCTCGATCTTGATCTTTCTGTTTTCTGTGTGTTCATTGAGATCTGATCCTGCTATTCTTTAGATTTCGATTTTTAACTGAGTTGTTGGGAAGCCGCGACGGGGACGTCGGAATTTGGATTTATAGGGCTTTTAGATGTGTTCTTCTGTTGTTTAGGATCTAAGAACTAAATGGCTTTCAGATATTGGTATTAAGGAATTGCTTGCTTATTGAGAATTGAGATGGTGACTGCGTTATTTATCTAATGCAATTGGAGTTTTCGGAATTACATTTTTAGGTACCTTCAGTTTCAGGAAAAAATTTTAATGCTTTTTTATTTTTACACACGCCATTTTTTGTGCCAGTTTTAGAGTTGTTAATTTTGATCGGTAATGGGACGTCACCATCGATCTTCAAGTGGTGGGCCCCCATTTTCAAGTGGACTCTGAAACCTCTCTTTAAAATAGTAATCTGGATTTGACAAGAGAAGAATACTCGTGCCCAGACAAAATTTTGTTGCCATTGTTATTGAAATTTGCCTTTAGAAAAGGAGTTCTAGAATTTTGGCCCAGTTTCTGTATGATGCAATTGGTTCTTTTTACCTTCATCAGTGTAGTGTGGCTCTGGCTCCGTGCATTTGTACTCCCATTCAGCCTCTATGGTCGATTTGTTTTCTTATTCTCTGCAAGGTGATGACTGCTAATGATTCTTATTACCAATCCCAGCCTTTTATACAAATTATTTGTTCGGGAGGTCTGATCTCAGTAAGGCTGCCGGAGACATCACCAAACCACCTAGGGTGTCTCTTGCAAAAACGAATTTGTAGAGAGTTTTCTAAAACCCCAGTCCAGCCACCTAACTGATATAGTCTCGAATCTATTTTTTGTCTTTACTTAACTTAGTAGCATAGTGTAAGCTCATTTAAGGCACGGATCTAAGATGTGGTTGATTGGTAGTCAGTTGAAACAAATAAACGGATCATAGGTTGGTTGAATGCTGAGTTTCGCTTAGGCCATGCATTCACCGACTATTTATGTTGTGATTTTTATATCTACTTGCTGTCGTAGAAAGATCCCATTTACAAGTTGAACTTGAAATGCAATCCATAACTAATCAGGCTCGTGTCAAAATTTAGTATGCAAGGCTTATTTTTTGTGTAGATTTGGCATTGGTAGCAAAGCCTGAAAGGTAATACTGAAGACTTGAAAGTGTTGCAGAGGTTTCATGATATGTAACCTCAAACGAGACTAGTGAAAAAACCTGCCTTTTATTATTATTTGGTGATACTTGTTCCATTTGTCTTGGTTTACCTTCTGGGTAATATATGAAACTATTGTGAAGTCATCTCTTATATATGCTTCTTTTTGCCAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTTGAGTCTCTCAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGATCATCATCGTTTGAATATGAGGTACATCATCAATCATCAAAGGAGTAAAAAAGGATGAGTTCATTATGCTATGTCTTGAATTTCCACTCCTGGATTTGCTCAACAAACAAACATTTAGTTTATGGTGTCATTTTTTATGGTGCTGGAGCTTCTCGGAGGGTTGGATTCCTGTTTGGAGTTCTTTTGAAATTGACACCTCTTCTTATTGTCAATTCCTTGTATTTTCTTATCCGAGCTCACTCTCTTATTTTGTTCTAATTTTTGTATGCCCCATAGTTTTAAATGTATCAGATTGTTCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATTTAGGTAAAATGTTCAGTTGTTAAATGGGAGCAGAATTTTTTTAGTTTCTTCAATTTGCTGTGCTTAGGAGGAGGTTTTGTTTCTCCACAGAATCCACTTTTATCCCCAAAGCCAAACTATCCCTAGTTATTATAAAGAAAAGCTTCTGCCTGAAACTGTATGGATTTTTGTGTATATATAGGCGTTCAAAGGTTAAATTACACTCTCCC

mRNA sequence

ATCTTATTAGAGTAGAGGCAAGCAAAAACCAATTCCTAAAAATTGGCTGAGTTCGCCTTCGTTTAAAACTATATAGATAAACAGAAAACGGAATGGGGCGAGGCGAGTATTCCCTCATCTCAACTCGTTATTATATCAAAATTCAGGAACAACCGAGATCATTTAACCCTAAAATTTTCGAAAATTTTAATAATAAAGGTAATAGTCGAAAGCCCAAGCCCAAGCCCAAGCCTAAGCCCATTGTTAGGAAGCCGAAGCCCATTAAGGAGCCCAGTCCAAGACGCGCATAGCGAAATCCGTTTCCGATGAAACGTAACGCGTGATCGTCTTCAACAAATTTCAAAACCTTTCTCTCTCTGCGTTTCTCTCTCTCATGCCTTGGAGCTCCACCTCCTGATCCGTTTTCAGACCCATCGAATTCCGTGGAAAACCAGAGGCATCGGATCCGACCTGATTAAGTATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTTGAGTCTCTCAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGATCATCATCGTTTGAATATGAGGTACATCATCAATCATCAAAGGAGTAAAAAAGGATGAGTTCATTATGCTATGTCTTGAATTTCCACTCCTGGATTTGCTCAACAAACAAACATTTAGTTTATGGTGTCATTTTTTATGGTGCTGGAGCTTCTCGGAGGGTTGGATTCCTGTTTGGAGTTCTTTTGAAATTGACACCTCTTCTTATTGTCAATTCCTTGTATTTTCTTATCCGAGCTCACTCTCTTATTTTGTTCTAATTTTTGTATGCCCCATAGTTTTAAATGTATCAGATTGTTCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATTTAGGTAAAATGTTCAGTTGTTAAATGGGAGCAGAATTTTTTTAGTTTCTTCAATTTGCTGTGCTTAGGAGGAGGTTTTGTTTCTCCACAGAATCCACTTTTATCCCCAAAGCCAAACTATCCCTAGTTATTATAAAGAAAAGCTTCTGCCTGAAACTGTATGGATTTTTGTGTATATATAGGCGTTCAAAGGTTAAATTACACTCTCCC

Coding sequence (CDS)

ATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTTGAGTCTCTCAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGA

Protein sequence

MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS

Homology

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BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-113
Identity = 206/217 (94.93%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.0e-111
Identity = 202/214 (94.39%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVK 63
           YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRVDDKIVK
Sbjct: 5   YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVK 64

Query: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
           AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELRDHTD NIVIML
Sbjct: 65  AQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIML 124

Query: 124 VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKAL 183
           VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLT+IY+VVCRKAL
Sbjct: 125 VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL 184

Query: 184 EIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           E+G+DPAALPKGQTINVG KDDVSAVKKVGCCSS
Sbjct: 185 EVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

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BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 6.2e-109
Identity = 198/217 (91.24%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 9.3e-105
Identity = 190/218 (87.16%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-102
Identity = 186/218 (85.32%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ K FAERENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of MC11g0844.1 vs. NCBI nr
Match: XP_022139663.1 (ras-related protein RABA1f [Momordica charantia])

HSP 1 Score: 428 bits (1100), Expect = 5.00e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. NCBI nr
Match: XP_038897555.1 (ras-related protein RABA1f [Benincasa hispida])

HSP 1 Score: 425 bits (1093), Expect = 5.84e-150
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. NCBI nr
Match: XP_004146038.1 (ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-related protein RABA1f [Cucumis melo] >ADN33802.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0066790.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >KGN55093.1 hypothetical protein Csa_012062 [Cucumis sativus] >TYK27937.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 422 bits (1086), Expect = 6.82e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. NCBI nr
Match: XP_027062653.1 (ras-related protein RABA1f [Coffea arabica] >XP_027170151.1 ras-related protein RABA1f [Coffea eugenioides] >CDP15893.1 unnamed protein product [Coffea canephora])

HSP 1 Score: 417 bits (1073), Expect = 6.54e-147
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALES+NVENAFTEVLTQIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALE+GEDPAALPKGQTINVG KDDVSAVKKVGCCS+
Sbjct: 181 KALEVGEDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217

[Close]

BLAST of MC11g0844.1 vs. NCBI nr
Match: XP_010535057.1 (PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana])

HSP 1 Score: 417 bits (1072), Expect = 9.29e-147
Identity = 210/217 (96.77%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KAL+IG+DPAALPKGQTINVG+KDDVSA+KKVGCCSS
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAIKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL
Match: A0A6J1CG72 (ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 2.42e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL
Match: A0A5D3DVT8 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001250 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 3.30e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL
Match: E5GBG0 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 3.30e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL
Match: A0A0A0L041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 3.30e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL
Match: A0A1S3CJW4 (ras-related protein RABA1f OS=Cucumis melo OX=3656 GN=LOC103501795 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 3.30e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-114
Identity = 206/217 (94.93%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of MC11g0844.1 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-110
Identity = 198/217 (91.24%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of MC11g0844.1 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 380.9 bits (977), Expect = 6.6e-106
Identity = 190/218 (87.16%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of MC11g0844.1 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 186/218 (85.32%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ K FAERENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of MC11g0844.1 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 371.3 bits (952), Expect = 5.2e-103
Identity = 180/216 (83.33%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELRDHTD+N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAV TE+A++F+EREN FFMETSAL++ NVE AFT VLTQIYRV+ R
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCS 217
           KAL+   DP +LPKGQTI++GNKDDV+AVK  GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of MC11g0844.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	2.4e-113	94.93	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q40521	3.0e-111	94.39	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9LK99	6.2e-109	91.24	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q9S810	9.3e-105	87.16	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	1.5e-102	85.32	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of MC11g0844.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139663.1	5.00e-151	100.00	ras-related protein RABA1f [Momordica charantia]	[more]
XP_038897555.1	5.84e-150	99.08	ras-related protein RABA1f [Benincasa hispida]	[more]
XP_004146038.1	6.82e-149	98.16	ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-rela...	[more]
XP_027062653.1	6.54e-147	96.77	ras-related protein RABA1f [Coffea arabica] >XP_027170151.1 ras-related protein ...	[more]
XP_010535057.1	9.29e-147	96.77	PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana]	[more]

BLAST of MC11g0844.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG72	2.42e-151	100.00	ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 S...	[more]
A0A5D3DVT8	3.30e-149	98.16	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GBG0	3.30e-149	98.16	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0L041	3.30e-149	98.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1	[more]
A0A1S3CJW4	3.30e-149	98.16	ras-related protein RABA1f OS=Cucumis melo OX=3656 GN=LOC103501795 PE=4 SV=1	[more]

BLAST of MC11g0844.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	1.7e-114	94.93	RAB GTPase homolog A1F	[more]
AT3G15060.1	4.4e-110	91.24	RAB GTPase homolog A1G	[more]
AT1G28550.1	6.6e-106	87.16	RAB GTPase homolog A1I	[more]
AT2G33870.1	1.1e-103	85.32	RAB GTPase homolog A1H	[more]
AT4G18430.1	5.2e-103	83.33	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.2 coord: 152..174 score: 40.99 coord: 55..77 score: 53.32 coord: 117..130 score: 55.15 coord: 37..53 score: 36.77
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 5.1E-9 score: 46.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 9.4E-30 score: 114.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.1E-113 score: 393.6
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..215
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 36.107014
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..179 score: 9.712715
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 5.0184E-132 score: 366.115
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 2.5E-12 score: 37.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 8.9E-63 score: 210.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 17.080462
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.1E-40 score: 136.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 7.9E-72 score: 242.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0844	MC11g0844	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0844.1-utr5	MC11g0844.1-utr5-MC11:7203271..7203730	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0844.1-cds	MC11g0844.1-cds-MC11:7203731..7203951	CDS
MC11g0844.1-cds	MC11g0844.1-cds-MC11:7205346..7205778	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0844.1-utr3	MC11g0844.1-utr3-MC11:7205779..7206319	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0844.1	MC11g0844.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding