MC11g0237.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0237.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BHLH transcription factor
Location	MC11: 1879945 .. 1880553 (-)
Sequence length	609
RNA-Seq Expression	MC11g0237.1
Synteny	MC11g0237.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGATCATGAGCAGCTAAAATCGGAGGATCAGATGGAGATAATCATGATGATGCAGCAGATGGAAAAAATCCCACAATTTTGCAGCTCTTATAACGACCTCTCCCCGCCGTCCGATTTCAGCACGAGCAGCAACATCAGCAGCAGCGACCCACATTGCCTTGGAAACGTTCTACAAGGCGCAGAATCAGCATCGCCGATGGGTTTGGGTCGAGTCCCCAACAGCGGCGAAGAAGAGGCGTCGCAGAAGCAGAGCTCGGTGGCGGCGATGAGGGAAATGATATTCCGAATGGCGGTGATGCAACCGATCCACATAGACCCGGAATCGGTGAAGGCGCCAAAAAGGAGGAACGTGAAGATCTCGACGGACCCACAAAGCGTAGCGGCTCGGCATAGGAGAGAGAGAATTAGCGAGAGAATTAGGATACTTCAGAGACTGGTCCCCGGCGGTACCAAAATGGACACGGCTTCAATGTTGGACGAGGCCATTCATTACGTTAAATTTTTGAAGACCCAAGTGAAGTCGCTTCAGAGAGCTGCCACTGCCGCCAACTCCCCGATCACTCCCTTTCCTTTGGAAATGTCTACTGGAAGCTATGTTCCT

mRNA sequence

ATGGAAAATGATCATGAGCAGCTAAAATCGGAGGATCAGATGGAGATAATCATGATGATGCAGCAGATGGAAAAAATCCCACAATTTTGCAGCTCTTATAACGACCTCTCCCCGCCGTCCGATTTCAGCACGAGCAGCAACATCAGCAGCAGCGACCCACATTGCCTTGGAAACGTTCTACAAGGCGCAGAATCAGCATCGCCGATGGGTTTGGGTCGAGTCCCCAACAGCGGCGAAGAAGAGGCGTCGCAGAAGCAGAGCTCGGTGGCGGCGATGAGGGAAATGATATTCCGAATGGCGGTGATGCAACCGATCCACATAGACCCGGAATCGGTGAAGGCGCCAAAAAGGAGGAACGTGAAGATCTCGACGGACCCACAAAGCGTAGCGGCTCGGCATAGGAGAGAGAGAATTAGCGAGAGAATTAGGATACTTCAGAGACTGGTCCCCGGCGGTACCAAAATGGACACGGCTTCAATGTTGGACGAGGCCATTCATTACGTTAAATTTTTGAAGACCCAAGTGAAGTCGCTTCAGAGAGCTGCCACTGCCGCCAACTCCCCGATCACTCCCTTTCCTTTGGAAATGTCTACTGGAAGCTATGTTCCT

Coding sequence (CDS)

ATGGAAAATGATCATGAGCAGCTAAAATCGGAGGATCAGATGGAGATAATCATGATGATGCAGCAGATGGAAAAAATCCCACAATTTTGCAGCTCTTATAACGACCTCTCCCCGCCGTCCGATTTCAGCACGAGCAGCAACATCAGCAGCAGCGACCCACATTGCCTTGGAAACGTTCTACAAGGCGCAGAATCAGCATCGCCGATGGGTTTGGGTCGAGTCCCCAACAGCGGCGAAGAAGAGGCGTCGCAGAAGCAGAGCTCGGTGGCGGCGATGAGGGAAATGATATTCCGAATGGCGGTGATGCAACCGATCCACATAGACCCGGAATCGGTGAAGGCGCCAAAAAGGAGGAACGTGAAGATCTCGACGGACCCACAAAGCGTAGCGGCTCGGCATAGGAGAGAGAGAATTAGCGAGAGAATTAGGATACTTCAGAGACTGGTCCCCGGCGGTACCAAAATGGACACGGCTTCAATGTTGGACGAGGCCATTCATTACGTTAAATTTTTGAAGACCCAAGTGAAGTCGCTTCAGAGAGCTGCCACTGCCGCCAACTCCCCGATCACTCCCTTTCCTTTGGAAATGTCTACTGGAAGCTATGTTCCT

Protein sequence

MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVLQGAESASPMGLGRVPNSGEEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQRAATAANSPITPFPLEMSTGSYVP

Homology

[Close]

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-41
Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 18  MMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSS----DPHCLGN---------VLQGAE 77
           MMM QMEK+P+FC+  +    P   +T   + +S      H + N         +L    
Sbjct: 8   MMMHQMEKLPEFCNPNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLTNPS 67

Query: 78  SASP------MGLGRVPNSGEEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRR 137
           S SP      + L +  NS     +   +++AAMREMIFR+AVMQPIHIDPE+VK PKRR
Sbjct: 68  SISPNTAYSSVFLDKRNNSNN---NNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRR 127

Query: 138 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSL 183
           NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV+SL
Sbjct: 128 NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 187

[Close]

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.4e-39
Identity = 105/185 (56.76%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 18  MMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVLQGAESASPM-----GLG 77
           MMMQQMEK+P+  S+ N    P +    S  S++ P               M     GL 
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSE-SNTHPFFFNPTHSHLPFDQTMPHHQPGLN 69

Query: 78  -RVPNSGEEEASQKQ------SSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTD 137
            R   S      +K+      +++AAMREMIFR+AVMQPIHIDPESVK PKR+NV+IS D
Sbjct: 70  FRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKD 129

Query: 138 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQRAATAA 191
           PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV+SL+  A   
Sbjct: 130 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVN 189

[Close]

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 79  EEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERI 138
           +E+  +    + AM+EM++++A MQ + IDP +VK PKRRNV+IS DPQSVAARHRRERI
Sbjct: 82  DEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERI 141

Query: 139 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQRAATAANSPITPFP 194
           SERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       N+  TP P
Sbjct: 142 SERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN-----NTGYTPPP 191

[Close]

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.6e-28
Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 88  SVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQR 147
           ++A M+EMI+R A  +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 148 LVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQ-------RAATAANSPITPFPL 195
           LVPGGTKMDTASMLDEA +Y+KFL+ QVK+L+       +   + +S  T FPL
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL 354

[Close]

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 80  EEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERIS 139
           +E  +    + AM+EM + +AVMQP+ IDP +V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 140 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQ 180
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ LQ
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MC11g0237.1 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 258 bits (660), Expect = 6.39e-84
Identity = 157/231 (67.97%), Postives = 169/231 (73.16%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT------------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT            AA +P   FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVP 223

[Close]

BLAST of MC11g0237.1 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 257 bits (657), Expect = 1.55e-83
Identity = 156/226 (69.03%), Postives = 168/226 (74.34%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT-------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT       AA +    FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYVP 218

[Close]

BLAST of MC11g0237.1 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257 bits (656), Expect = 2.27e-83
Identity = 156/227 (68.72%), Postives = 168/227 (74.01%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT--------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT        AA +    FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAAAASGVGFPLEMSSGSYVP 219

[Close]

BLAST of MC11g0237.1 vs. NCBI nr
Match: KAG7025068.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (655), Expect = 3.33e-83
Identity = 156/228 (68.42%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT---------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT         AA +    FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVP 220

[Close]

BLAST of MC11g0237.1 vs. NCBI nr
Match: KAG6591384.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244 bits (622), Expect = 2.46e-78
Identity = 146/216 (67.59%), Postives = 158/216 (73.15%), Query Frame = 0


Query: 14  MEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVLQGAESASPMGLGR 73
           MEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + Q AES+SP     
Sbjct: 1   MEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQQAAESSSPPFTNN 60

Query: 74  VP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKR 133
           +P                NSG E   QKQ SVAAMREMIFR+AVMQPI IDPE+VK PKR
Sbjct: 61  LPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKR 120

Query: 134 RNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKS 193
           RNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV+S
Sbjct: 121 RNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 180

Query: 194 LQRAAT----------AANSPITPFPLEMSTGSYVP 203
           L+RAAT          AA +    FPLEMS+GSYVP
Sbjct: 181 LERAATNRPLPDAAAAAAAASGVGFPLEMSSGSYVP 210

[Close]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 3.09e-84
Identity = 157/231 (67.97%), Postives = 169/231 (73.16%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT------------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT            AA +P   FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVP 223

[Close]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 7.49e-84
Identity = 156/226 (69.03%), Postives = 168/226 (74.34%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVL 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YN LSPPSD  +SS     DPHCL  + 
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNHLSPPSDHFSSSTT---DPHCLETLQ 60

Query: 61  QGAESASPMGLGRVP----------------NSGEEEASQKQSSVAAMREMIFRMAVMQP 120
           Q AES+SP     +P                NSG E   QKQ SVAAMREMIFR+AVMQP
Sbjct: 61  QAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQP 120

Query: 121 IHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180
           I IDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 180

Query: 181 IHYVKFLKTQVKSLQRAAT-------AANSPITPFPLEMSTGSYVP 203
           IHYVKFLKTQV+SL+RAAT       AA +    FPLEMS+GSYVP
Sbjct: 181 IHYVKFLKTQVQSLERAATNRPLPDAAAPASGVGFPLEMSSGSYVP 218

[Close]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 4.88e-78
Identity = 155/236 (65.68%), Postives = 170/236 (72.03%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPS-DFSTSS--------NISSS 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YND SPPS DFS+++        + SSS
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNDFSPPSSDFSSTTTDHPHCHLDSSSS 60

Query: 61  DPHCLGNVLQGAESASPMGL-------------GRVPNSG--EEEASQKQSSVAAMREMI 120
            P  + N      +  P                 R  NSG  E E+ QKQ SVAAMREMI
Sbjct: 61  PPLFINNNSNNNSNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMI 120

Query: 121 FRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FR+AVMQPIHIDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKTQVKSLQRAATAA-NSPITP--------FPLEMSTGSYVP 203
           TASMLDEAIHYVKFLKTQV+SL+RAA +A N PIT         FPLEMSTGSY+P
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPITGVGAPSSVGFPLEMSTGSYIP 231

[Close]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 2.84e-76
Identity = 154/233 (66.09%), Postives = 170/233 (72.96%), Query Frame = 0


Query: 1   MENDHEQLKSEDQMEIIMMMQQMEKIPQFCSSYNDLSPPS-DFSTSS--------NISSS 60
           MEND   LKSEDQMEI+MMMQQMEKIP+F   YND SPPS DFS+++        + SSS
Sbjct: 1   MENDD--LKSEDQMEIMMMMQQMEKIPEF---YNDFSPPSSDFSSTTTDNPHCHLDSSSS 60

Query: 61  DPHCLGNVLQG--------AESASPM---GLGRVPNSG--EEEASQKQSSVAAMREMIFR 120
            P  + N             +S  P       R  NSG  E E+ QKQ SVAAMREMIFR
Sbjct: 61  PPLFINNNNSNNNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFR 120

Query: 121 MAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180
           +AVMQPIHIDPE+VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 181 SMLDEAIHYVKFLKTQVKSLQRAATAA-NSPITP-------FPLEMSTGSYVP 203
           SMLDEAIHYVKFLKTQV+SL+RAA +  N PIT        FPLEMS+GSY+P
Sbjct: 181 SMLDEAIHYVKFLKTQVQSLERAAVSTGNRPITGGGAPSVGFPLEMSSGSYIP 228

[Close]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL
Match: A0A5A7V7R5 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003280 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 1.43e-71
Identity = 144/220 (65.45%), Postives = 160/220 (72.73%), Query Frame = 0


Query: 14  MEIIMMMQQMEKIPQFCSSYNDLSPPS-DFSTSS--------NISSSDPHCLGNVLQG-- 73
           MEI+MMMQQMEKIP+F   YND SPPS DFS+++        + SSS P  + N      
Sbjct: 1   MEIMMMMQQMEKIPEF---YNDFSPPSSDFSSTTTDNPHCHLDSSSSPPLFINNNNSNNN 60

Query: 74  ------AESASPM---GLGRVPNSG--EEEASQKQSSVAAMREMIFRMAVMQPIHIDPES 133
                  +S  P       R  NSG  E E+ QKQ SVAAMREMIFR+AVMQPIHIDPE+
Sbjct: 61  PPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDPEA 120

Query: 134 VKAPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 193
           VK PKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL
Sbjct: 121 VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 180

Query: 194 KTQVKSLQRAATAA-NSPITP-------FPLEMSTGSYVP 203
           KTQV+SL+RAA +  N PIT        FPLEMS+GSY+P
Sbjct: 181 KTQVQSLERAAVSTGNRPITGGGAPSVGFPLEMSSGSYIP 217

[Close]

BLAST of MC11g0237.1 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 18  MMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSS----DPHCLGN---------VLQGAE 77
           MMM QMEK+P+FC+  +    P   +T   + +S      H + N         +L    
Sbjct: 8   MMMHQMEKLPEFCNPNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLTNPS 67

Query: 78  SASP------MGLGRVPNSGEEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRR 137
           S SP      + L +  NS     +   +++AAMREMIFR+AVMQPIHIDPE+VK PKRR
Sbjct: 68  SISPNTAYSSVFLDKRNNSNN---NNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRR 127

Query: 138 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSL 183
           NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV+SL
Sbjct: 128 NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 187

[Close]

BLAST of MC11g0237.1 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 4.5e-40
Identity = 105/185 (56.76%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 18  MMMQQMEKIPQFCSSYNDLSPPSDFSTSSNISSSDPHCLGNVLQGAESASPM-----GLG 77
           MMMQQMEK+P+  S+ N    P +    S  S++ P               M     GL 
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSE-SNTHPFFFNPTHSHLPFDQTMPHHQPGLN 69

Query: 78  -RVPNSGEEEASQKQ------SSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTD 137
            R   S      +K+      +++AAMREMIFR+AVMQPIHIDPESVK PKR+NV+IS D
Sbjct: 70  FRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKD 129

Query: 138 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQRAATAA 191
           PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QV+SL+  A   
Sbjct: 130 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVN 189

[Close]

BLAST of MC11g0237.1 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 79  EEEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERI 138
           +E+  +    + AM+EM++++A MQ + IDP +VK PKRRNV+IS DPQSVAARHRRERI
Sbjct: 82  DEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERI 141

Query: 139 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQRAATAANSPITPFP 194
           SERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       N+  TP P
Sbjct: 142 SERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN-----NTGYTPPP 191

[Close]

BLAST of MC11g0237.1 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.7e-29
Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 88  SVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERISERIRILQR 147
           ++A M+EMI+R A  +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 148 LVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQ-------RAATAANSPITPFPL 195
           LVPGGTKMDTASMLDEA +Y+KFL+ QVK+L+       +   + +S  T FPL
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPL 354

[Close]

BLAST of MC11g0237.1 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 8.0e-29
Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 80  EEASQKQSSVAAMREMIFRMAVMQPIHIDPESVKAPKRRNVKISTDPQSVAARHRRERIS 139
           +E  +    + AM+EM + +AVMQP+ IDP +V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 140 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVKSLQ 180
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ LQ
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

The following BLAST results are available for this feature:

BLAST of MC11g0237.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	5.2e-41	57.07	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	6.4e-39	56.76	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	3.4e-32	64.35	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q8S3D2	6.6e-28	58.77	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	1.1e-27	64.00	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of MC11g0237.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936595.1	6.39e-84	67.97	transcription factor HEC2-like [Cucurbita moschata]	[more]
XP_022975973.1	1.55e-83	69.03	transcription factor HEC2-like [Cucurbita maxima]	[more]
XP_023536625.1	2.27e-83	68.72	transcription factor HEC2-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025068.1	3.33e-83	68.42	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591384.1	2.46e-78	67.59	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MC11g0237.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE54	3.09e-84	67.97	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=...	[more]
A0A6J1IKS0	7.49e-84	69.03	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 ...	[more]
A0A0A0L0B3	4.88e-78	65.68	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 S...	[more]
A0A1S3BU58	2.84e-76	66.09	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1	[more]
A0A5A7V7R5	1.43e-71	65.45	Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of MC11g0237.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	3.7e-42	57.07	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	4.5e-40	56.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	2.4e-33	64.35	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	4.7e-29	58.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	8.0e-29	64.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 128..177 e-value: 3.2E-13 score: 59.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 132..171 e-value: 1.2E-6 score: 28.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 122..171 score: 15.217952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 125..190 e-value: 2.3E-12 score: 48.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 127..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..56
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 75..199
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 75..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0237	MC11g0237	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0237.1-cds	MC11g0237.1-cds-MC11:1879945..1880553	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0237.1	MC11g0237.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity