MC10g1161.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC10g1161.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	rRNA 2'-O-methyltransferase fibrillarin
Location	MC10: 14666183 .. 14669648 (+)
Sequence length	1169
RNA-Seq Expression	MC10g1161.1
Synteny	MC10g1161.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCGCGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGCGGTAGAGGCAGAGGTGGTGGAGGTAGAGGTGGTGGTGGAGGCAGAGGTATGCAGAGCCGTGGTGGTGGTCGAGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGCGGTGGAATGAAAGGTGGAAGCAAAGTTGTGATTGAACCCCACAGACATGAAGGTATTTTCATAGCCAAGGGCAAAGAAGATGCTCTTGTCACTAAGAATATGGTCTCTGGTGAATCTGTCTACAATGAGAAGAGGATATCCGTACAGGTAATCTCACCTTGAAATAATGCTTGCGCCTGGATGTTTGTTATCTCTCATAGTGAATTTTTGAAATTTAGTGACACCATTCTATACGAAATATTGACTATGTGAGTGCTTGATTATTACTCATGAGAAATTCTAGTTGGAATTAATATCTCCAAATAGTTTTGTGTGGTTCTGGCACAATAGTTAGGGAGTGTATATGAAAGTACTTGGCTTTATGCGGGTGCTGTGTTTGTAAGCTTATAAGCTAAATGTTTTATATATACTGTCCTTCCAGAATGAAGATGGAACTAAAGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGGCGGCTGCAGTTCTTGGTGGCGTTGATGACATATGGATTGTTAGTGCTTTTCACCTAAAATTTTGATTTTATCTACTTCAATTTTTCAGTTTGTTATTTTCTTTGCTTCTTTATTTTTAATTTGCTAACATGTGTATTGTAGAAACCTGGTGCTCGAGTGTTGTATCTTGGCGCTGCTTCAGGAACAACAGTATCTCATGTATCAGATCTTGTGGGGCCTGTAAGTAGTTATTTATAGAGTATATGTAGTAGTCTTTCATTGAAGTAAAAAATGCTTAACCACTGTCGTTCTGATTTGCAGACTGGTATAGTGTATGCTGTGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTGAACATGGCAAAGAAGCGCACAAATGTTATACCCATCATTGAAGATGCTAGACACCCTGCCAAGTATCGAATGTTGGTTGGCATGGTGGATGTGGTCTTTTCAGATGTTGCTCAGCCAGATCAGGTTCACACTTTGTTTTTTACTAGTCTTATTATTATTGTATGTTAACGTCATCACCTTTGTTGAGATTGATGGCACACTTCTTCGACTTGTGTGATTAATAGAATCCTACCATTGATTTTTGTATCTTATTGATTAATCTTTTTAAGTGGTGCAGTACATTTCAAACTATAGTTTTCATTTGTACAGTCTTGTTGGATTTAATGCCTACTTATCTCTCCATGTTTCTAGCTTAAAGCCTTTTTTATCCTCAAATTATTTAGCATATGATGAATTGCTCGGATTCCCCTTCAAGACTTCTTGAATGATGCAAGTTTCGAGTTTCTGATGCTTCACAAAGACTTACTTTGTCTTAGTTTTTTCATAATTGCTATCTAGCAGACTGTTTATTTTCATACTTTTTCTCCTTGAACCATATAGCATATGACGAATTTCTCGAATTTTCCTTCTTGTATGATGCAAGTCCTGACTTTCAGATCCTTCAAAAAGACTTGATTTTTACTGTTTCTTTTCATACATTTTCTCCTTGAACTATTTGGCATATGATGAATTTCTCAGATTCCATTCAAGACTTCTTGAATGGTGTAAGTCCTGAGTTTCAGATGCTTCAAAAAGACTTGCTTTTGAATTGTCGTCATTGTTTCTTAATAAATGCTTATCAATTCTGGTGATACTATCCGGATTCTTCTTTTCAAAATTTTCCTGGGTCTGTTTTCCTTTCTCCCATGTTAACATCCTATTCCATCTCAAGTAGATTGTATAAAATCAATCCAAGCCTTATTATTTTTGTCTAGGTACCCCTTACCCTGTGCTTAAAGTTCATAAGTTGCATTTCTTCATTTTTTATATTCATGAAATACTCTATGTAAACAATTGCTTTTTTTAGAACTTTGGATCAAACCATCTTGTTCTCTCAAAGCATTAGTACTAATCAACTGATTCTATATTTTTTATTCCAATACGTGAAATAATTCCACTATCACCTTTACATTCCATATTTACACTGCCCACATTTTCCATCACACCTCTTTTTGTGTATAGTAGAAGATTTTCATCTTTTATTAGCACTGGAAATTAGAAGTCTTTTTTCTGTTTAGCTGTATTTTTTTTGAGTTGGATGATTATTCTAATTGCCAACCATTTCTGGATCATTCAATATGTGGGGTCTTTGTGTAAAAATCTCTCTAATTGTTCTCCTATTAAAAGAACCCTTAATTTGAAATTCAGCATATGCTTTATTCATTGTGACCAATGATCTGTTCTGGAATCTGGATCTTATAATACAGAAAGTTAAATTTTGGAGGTTTAGAATTTTTCTGTAGTCGATTATAGAGCTCAACTTCAAGCAAGAAGATGAAATTATAAAAGAAAGCATCGGCTATCTTATTTAGTTCTGGGTTATGTGCGGGATAATGAGATTGTGTCAGAAATTTAATAATCTGAAGGTCTCTCACCAATTTCAATTAAGATAATTTTATCACTTATTAATTTGATTTGATGTCGTGCAGGTAAATTCTCACGTTTTTCATTTTAGGCTCTTCCTATTTGCTAAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACTTCTTGAATGATGCATAACCCGAGTTTGTGATGCGTCAAGAATATCACATTTTGATAAAACCCTTCATTTGCTACCAATTTTGCATTCTGGCTTGGCTTATTTTTTGAAATCATGAACTTCTCGGTCTTTCATCTTCTAAAGTTGACCACTTTTGACTTGTTCAATGCAGGCTAGAATTTTGGCACTTAATGCATCATATTTTCTCAAGGCGGGTGGCCATTTTGTTATATCAATCAAAGTGAGTTCAAGATTTGCATTTTGTTAAAGACAATAGACAGTATAATCCATGAATATAAGATAATATGGTATTGAACCTTTTTCAGGCCAACTGCATCGACTCGACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGCTAAAGGCAGATCAATTCAAACCCACTGAGCAAGTAACTCTTGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATCGGGCGCCGAAGAAACAGAAGCCCGCTGCATAGACTATCCAATGAACTAGGATCTTGATTATGTGAACAGTTTATTGATTGCTACTGCTAGCTTGTAGGCGGGATCATTTTAAAGGGGAGACTATGTTTTTGATATCTTTGGTGATTAATGGAGGACATAAATATGTTGTTTTTTTTTTCACTACTTTGTTTTGTCTCTTTTGAAGTATAAGAATTGATAAATGGTAGAGAGATATATGTTTAGTTTTCTTTCTTATTTGACAGAAGAAATGAATGTGCACTTGCTATGTCTTTTTATAAAC

mRNA sequence

GGCCGCGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGCGGTAGAGGCAGAGGTGGTGGAGGTAGAGGTGGTGGTGGAGGCAGAGGTATGCAGAGCCGTGGTGGTGGTCGAGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGCGGTGGAATGAAAGGTGGAAGCAAAGTTGTGATTGAACCCCACAGACATGAAGGTATTTTCATAGCCAAGGGCAAAGAAGATGCTCTTGTCACTAAGAATATGGTCTCTGGTGAATCTGTCTACAATGAGAAGAGGATATCCGTACAGAATGAAGATGGAACTAAAGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGGCGGCTGCAGTTCTTGGTGGCGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGCGCTGCTTCAGGAACAACAGTATCTCATGTATCAGATCTTGTGGGGCCTACTGGTATAGTGTATGCTGTGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTGAACATGGCAAAGAAGCGCACAAATGTTATACCCATCATTGAAGATGCTAGACACCCTGCCAAGTATCGAATGTTGGTTGGCATGGTGGATGTGGTCTTTTCAGATGTTGCTCAGCCAGATCAGGCTAGAATTTTGGCACTTAATGCATCATATTTTCTCAAGGCGGGTGGCCATTTTGTTATATCAATCAAAGCCAACTGCATCGACTCGACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGCTAAAGGCAGATCAATTCAAACCCACTGAGCAAGTAACTCTTGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATCGGGCGCCGAAGAAACAGAAGCCCGCTGCATAGACTATCCAATGAACTAGGATCTTGATTATGTGAACAGTTTATTGATTGCTACTGCTAGCTTGTAGGCGGGATCATTTTAAAGGGGAGACTATGTTTTTGATATCTTTGGTGATTAATGGAGGACATAAATATGTTGTTTTTTTTTTCACTACTTTGTTTTGTCTCTTTTGAAGTATAAGAATTGATAAATGGTAGAGAGATATATGTTTAGTTTTCTTTCTTATTTGACAGAAGAAATGAATGTGCACTTGCTATGTCTTTTTATAAAC

Coding sequence (CDS)

GGCCGCGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGCGGTAGAGGCAGAGGTGGTGGAGGTAGAGGTGGTGGTGGAGGCAGAGGTATGCAGAGCCGTGGTGGTGGTCGAGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGCGGTGGAATGAAAGGTGGAAGCAAAGTTGTGATTGAACCCCACAGACATGAAGGTATTTTCATAGCCAAGGGCAAAGAAGATGCTCTTGTCACTAAGAATATGGTCTCTGGTGAATCTGTCTACAATGAGAAGAGGATATCCGTACAGAATGAAGATGGAACTAAAGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGGCGGCTGCAGTTCTTGGTGGCGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGCGCTGCTTCAGGAACAACAGTATCTCATGTATCAGATCTTGTGGGGCCTACTGGTATAGTGTATGCTGTGGAATTCTCTCATAGAAGTGGTAGAGATTTGGTGAACATGGCAAAGAAGCGCACAAATGTTATACCCATCATTGAAGATGCTAGACACCCTGCCAAGTATCGAATGTTGGTTGGCATGGTGGATGTGGTCTTTTCAGATGTTGCTCAGCCAGATCAGGCTAGAATTTTGGCACTTAATGCATCATATTTTCTCAAGGCGGGTGGCCATTTTGTTATATCAATCAAAGCCAACTGCATCGACTCGACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGCTAAAGGCAGATCAATTCAAACCCACTGAGCAAGTAACTCTTGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATCGGGCGCCGAAGAAACAGAAGCCCGCTGCATAG

Protein sequence

GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

Homology

[Close]

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 446.4 bits (1147), Expect = 2.5e-124
Identity = 256/306 (83.66%), Postives = 269/306 (87.91%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGG-GRGGGRGRGGGRG------- 60
           GRG GG   GRGDGG  G GRGGGGR  GGGRG   RGG GRG G  RGG RG       
Sbjct: 15  GRGRGGYSGGRGDGGFSG-GRGGGGR--GGGRGFSDRGGRGRGRGPPRGGARGGRGPAGR 74

Query: 61  GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 120
           GGMKGGSKV++EPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK EYRV
Sbjct: 75  GGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRV 134

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEFSHRS
Sbjct: 135 WNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRS 194

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLK+
Sbjct: 195 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKS 254

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 299
           GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERDHACVVG YR P
Sbjct: 255 GGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRMP 314

[Close]

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.3e-122
Identity = 252/303 (83.17%), Postives = 265/303 (87.46%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGG----GRGGGRGRGGGRGGGMK 60
           G  GGGGFRG  DG  GGRG GGG   GGG  G + R G    GRG  RGRGG   GGMK
Sbjct: 7   GGRGGGGFRGGRDG--GGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPPRGGMK 66

Query: 61  GGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPF 120
           GGSKV++EPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPF
Sbjct: 67  GGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPF 126

Query: 121 RSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDL 180
           RSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEFSHRSGRDL
Sbjct: 127 RSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDL 186

Query: 181 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHF 240
           VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNAS+FLK GGHF
Sbjct: 187 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLKTGGHF 246

Query: 241 VISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK 300
           VISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR PKKQK
Sbjct: 247 VISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRMPKKQK 306

[Close]

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.3e-108
Identity = 226/297 (76.09%), Postives = 252/297 (84.85%), Query Frame = 0


Query: 1   GRGG-GGGFRGRGDGGRGGRGRGG-GGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGG 60
           GRGG GGG  G G GG GG GRGG GGRGGGGGRG   RGGG  GG GRGGG  GG KGG
Sbjct: 51  GRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRGGG-AGGFKGG 110

Query: 61  SKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRS 120
             V IEPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+N +G K+EYRVWNPFRS
Sbjct: 111 KTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKIEYRVWNPFRS 170

Query: 121 KLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVN 180
           KLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N
Sbjct: 171 KLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLIN 230

Query: 181 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVI 240
           +AKKRTN+IPIIEDARHP KYRMLVGMVD +F+DVAQPDQ RI+ALNA +FLK GGHFVI
Sbjct: 231 VAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVI 290

Query: 241 SIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ 296
           SIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VVG+YR P KQ
Sbjct: 291 SIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 345

[Close]

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-107
Identity = 224/299 (74.92%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 2   RGGGGGF-RGRGDGGRGGRGRGG----GGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMK 61
           RGG GGF  GRG GGRGG G GG    GGRGGGGGRG   RGGG  GG GRGGG  GG K
Sbjct: 48  RGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGG-AGGFK 107

Query: 62  GGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPF 121
           GG  V IEPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+  +G K+EYRVWNPF
Sbjct: 108 GGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPF 167

Query: 122 RSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDL 181
           RSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL
Sbjct: 168 RSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDL 227

Query: 182 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHF 241
           +N+AKKRTN+IPIIEDARHP KYRMLVGMVD +F+DVAQPDQ RI+ALNA +FLK GGHF
Sbjct: 228 INVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHF 287

Query: 242 VISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ 296
           VISIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP+ERDHA VVG+YR P KQ
Sbjct: 288 VISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 344

[Close]

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-106
Identity = 222/306 (72.55%), Postives = 252/306 (82.35%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGGG--------RGGGRGRGGGRG 60
           GRGGG G RG   GGRGG G GG GRGGGGG G + RGGG         GGGRGRGGGRG
Sbjct: 23  GRGGGRGGRGGFGGGRGGFGGGGRGRGGGGG-GFRGRGGGGGRGGGFQSGGGRGRGGGRG 82

Query: 61  G--GMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEY 120
           G  G + G  V++EPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   K+EY
Sbjct: 83  GKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEY 142

Query: 121 RVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSH 180
           R WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSH
Sbjct: 143 RAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSH 202

Query: 181 RSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFL 240
           RSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDV+F+DVAQPDQ RI+ALNA  FL
Sbjct: 203 RSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFL 262

Query: 241 KAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYR 297
           + GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR
Sbjct: 263 RNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYR 322

[Close]

BLAST of MC10g1161.1 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 538 bits (1386), Expect = 8.67e-192
Identity = 296/300 (98.67%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
Sbjct: 66  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 305

[Close]

BLAST of MC10g1161.1 vs. NCBI nr
Match: XP_008439295.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo])

HSP 1 Score: 535 bits (1379), Expect = 1.05e-190
Identity = 293/300 (97.67%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of MC10g1161.1 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535 bits (1377), Expect = 2.04e-190
Identity = 294/300 (98.00%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of MC10g1161.1 vs. NCBI nr
Match: XP_038875959.1 (rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida])

HSP 1 Score: 533 bits (1373), Expect = 8.29e-190
Identity = 290/297 (97.64%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 3   GGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVV 62
           GGGGGFRGRGDGGRGGRGRGGGG  GGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVV
Sbjct: 9   GGGGGFRGRGDGGRGGRGRGGGGGRGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVV 68

Query: 63  IEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAA 122
           +EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAA
Sbjct: 69  VEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRSKLAA 128

Query: 123 AVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNMAKK 182
           AVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNMAKK
Sbjct: 129 AVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKK 188

Query: 183 RTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKA 242
           RTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKA
Sbjct: 189 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKA 248

Query: 243 NCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           NCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Sbjct: 249 NCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of MC10g1161.1 vs. NCBI nr
Match: XP_023542882.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533 bits (1372), Expect = 1.27e-189
Identity = 292/302 (96.69%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGG---GGGRGMQSRGGGRGGGRGRGGGRGGGMKG 60
           GRGGGGGFRGRGDGGRGGRGRGGGG GG   GGGRGM SRGGGRGGGRGRGGGRGGGMKG
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGSGGRGFGGGRGMASRGGGRGGGRGRGGGRGGGMKG 65

Query: 61  GSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFR 120
           GSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFR
Sbjct: 66  GSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFR 125

Query: 121 SKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLV 180
           SKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEFSHRSGRDLV
Sbjct: 126 SKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLV 185

Query: 181 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFV 240
           NMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFV
Sbjct: 186 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFV 245

Query: 241 ISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKP 299
           ISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKP
Sbjct: 246 ISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKP 305

[Close]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 538 bits (1386), Expect = 4.20e-192
Identity = 296/300 (98.67%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
Sbjct: 66  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 305

[Close]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 535 bits (1379), Expect = 5.07e-191
Identity = 293/300 (97.67%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL
Match: A0A6J1HX74 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111467690 PE=3 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 8.10e-190
Identity = 292/300 (97.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RG GGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 305

[Close]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL
Match: A0A6J1G280 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111449984 PE=3 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 8.10e-190
Identity = 292/300 (97.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RG GGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 305

[Close]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 6.41e-189
Identity = 294/300 (98.00%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGG-RGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGS 60
           GRGGGGGFRGRGDGGRGGRGRGGGG RGGGGGRGM SRGGGRGGGRGRGGGRGGGMKGGS
Sbjct: 6   GRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGGMKGGS 65

Query: 61  KVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 120
           KVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
Sbjct: 66  KVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK 125

Query: 121 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNM 180
           LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEFSHRSGRDLVNM
Sbjct: 126 LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNM 185

Query: 181 AKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVIS 240
           AKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLKAGGHFVIS
Sbjct: 186 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 245

Query: 241 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA 299
           IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Sbjct: 246 IKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA 304

[Close]

BLAST of MC10g1161.1 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 446.4 bits (1147), Expect = 1.8e-125
Identity = 256/306 (83.66%), Postives = 269/306 (87.91%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGG-GRGGGRGRGGGRG------- 60
           GRG GG   GRGDGG  G GRGGGGR  GGGRG   RGG GRG G  RGG RG       
Sbjct: 15  GRGRGGYSGGRGDGGFSG-GRGGGGR--GGGRGFSDRGGRGRGRGPPRGGARGGRGPAGR 74

Query: 61  GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRV 120
           GGMKGGSKV++EPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK EYRV
Sbjct: 75  GGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRV 134

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEFSHRS
Sbjct: 135 WNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRS 194

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNASYFLK+
Sbjct: 195 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKS 254

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 299
           GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERDHACVVG YR P
Sbjct: 255 GGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRMP 314

[Close]

BLAST of MC10g1161.1 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 439.9 bits (1130), Expect = 1.7e-123
Identity = 252/303 (83.17%), Postives = 265/303 (87.46%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGG----GRGGGRGRGGGRGGGMK 60
           G  GGGGFRG  DG  GGRG GGG   GGG  G + R G    GRG  RGRGG   GGMK
Sbjct: 7   GGRGGGGFRGGRDG--GGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPPRGGMK 66

Query: 61  GGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPF 120
           GGSKV++EPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPF
Sbjct: 67  GGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPF 126

Query: 121 RSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDL 180
           RSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEFSHRSGRDL
Sbjct: 127 RSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDL 186

Query: 181 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHF 240
           VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILALNAS+FLK GGHF
Sbjct: 187 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLKTGGHF 246

Query: 241 VISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK 300
           VISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR PKKQK
Sbjct: 247 VISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRMPKKQK 306

[Close]

BLAST of MC10g1161.1 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 338.6 bits (867), Expect = 5.2e-93
Identity = 195/293 (66.55%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 9   RGRGDGGRGGRGRGGGGRGGGGGRGMQSRGGGRGG--GRGRGGGR-----GGGMKGGSKV 68
           RGRG G RGGRG   GG G         RG GRGG  GRGRG GR      GG+KGGSKV
Sbjct: 6   RGRGGGVRGGRGLARGGEGSA------VRGSGRGGESGRGRGPGRVKSESDGGIKGGSKV 65

Query: 69  VIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLA 128
           ++ PHRH G+F+AK K DALVTKN+V GE +YNEKRI VQNED + VEYRVWNP RSKLA
Sbjct: 66  LVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLA 125

Query: 129 AAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDLVNMAK 188
            A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE S   G+ L+NMA+
Sbjct: 126 DAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAE 185

Query: 189 KRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIK 248
           KRTNVIPIIEDARHPAKYRMLVGMVD++FSDV  P+QA IL+LNASYFLK+GGHF+ISIK
Sbjct: 186 KRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIK 245

Query: 249 ANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 295
           AN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV G YR P+K
Sbjct: 246 ANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFGGYRLPRK 292

[Close]

BLAST of MC10g1161.1 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 308.5 bits (789), Expect = 5.7e-84
Identity = 184/222 (82.88%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   GRGGGGGFRGRGDGGRGGRGRGGGGRGGGGGRGMQSRGG----GRGGGRGRGGGRGGGMK 60
           G  GGGGFRG  DG  GGRG GGG   GGG  G + R G    GRG  RGRGG   GGMK
Sbjct: 7   GGRGGGGFRGGRDG--GGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPPRGGMK 66

Query: 61  GGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPF 120
           GGSKV++EPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPF
Sbjct: 67  GGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPF 126

Query: 121 RSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFSHRSGRDL 180
           RSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEFSHRSGRDL
Sbjct: 127 RSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDL 186

Query: 181 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQ 219
           VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQ
Sbjct: 187 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:

BLAST of MC10g1161.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	2.5e-124	83.66	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	2.3e-122	83.17	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	4.3e-108	76.09	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	1.6e-107	74.92	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P22509	1.0e-106	72.55	rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=...	[more]

BLAST of MC10g1161.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141240.1	8.67e-192	98.67	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
XP_008439295.1	1.05e-190	97.67	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
XP_023552409.1	2.04e-190	98.00	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_038875959.1	8.29e-190	97.64	rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]	[more]
XP_023542882.1	1.27e-189	96.69	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]

BLAST of MC10g1161.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHH3	4.20e-192	98.67	mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan...	[more]
A0A1S3AY25	5.07e-191	97.67	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1HX74	8.10e-190	97.33	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1G280	8.10e-190	97.33	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]
A0A6J1JA27	6.41e-189	98.00	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]

BLAST of MC10g1161.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	1.8e-125	83.66	fibrillarin 2	[more]
AT5G52470.1	1.7e-123	83.17	fibrillarin 1	[more]
AT5G52490.1	5.2e-93	66.55	Fibrillarin family protein	[more]
AT5G52470.2	5.7e-84	82.88	fibrillarin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 109..128 score: 75.71 coord: 161..178 score: 72.22 coord: 268..289 score: 61.36 coord: 81..100 score: 64.29 coord: 216..245 score: 67.62 coord: 186..215 score: 69.29 coord: 136..157 score: 77.92
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 63..291 e-value: 1.2E-172 score: 589.5
IPR000692	Fibrillarin	PIRSF	PIRSF006540	Nop17p	coord: 13..293 e-value: 1.1E-120 score: 399.5
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 63..290 e-value: 2.2E-109 score: 363.9
IPR000692	Fibrillarin	HAMAP	MF_00351	RNA_methyltransf_FlpA	coord: 77..290 score: 36.871891
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 58..113 e-value: 1.5E-29 score: 103.6
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 114..291 e-value: 2.2E-88 score: 296.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 1..298
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 1..298
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 138..240 e-value: 1.04207E-4 score: 38.9503
IPR020813	Fibrillarin, conserved site	PROSITE	PS00566	FIBRILLARIN	coord: 161..175
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 61..289

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC10g1161	MC10g1161	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14666183..14666485	CDS
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14666760..14666855	CDS
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14666959..14667036	CDS
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14667118..14667294	CDS
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14669049..14669117	CDS
MC10g1161.1-cds	MC10g1161.1-cds-MC10:14669203..14669379	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC10g1161.1-utr3	MC10g1161.1-utr3-MC10:14669380..14669648	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC10g1161.1	MC10g1161.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:0031122	cytoplasmic microtubule organization
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0031428	box C/D RNP complex
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0008649	rRNA methyltransferase activity