MC09g0705.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0705.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC09: 6546969 .. 6547894 (-)
Sequence length	918
RNA-Seq Expression	MC09g0705.1
Synteny	MC09g0705.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGTTGAATGTTTATACTTTGCAAAATGACGTTGAAGCTGCAGAAAATATTCTCCTCGAGATGAAGAAGATGAAAATCGAACGGGACTGGGTAACATTAAGCACATTAACTAATCTGTATTCCAAAAAGCAACTTACTGAAAAAGCATCATCTACTTTGAAGGAAATGGAGAAAATGGCATCTAAAAGAAACAGAATCACATTTTCCTCTCTTCTTAGCCTATACACCAATTTGGGGGATAAGGATGGAGTTTGGATGATATGGAAAAAGATGAATACGTCGTTCCGAAAGATGAGTGATAGTGAGTAATACTTGCATGATATCTTCTCTCGTGAAACTCCACGAGCTAGAGGAGGCCGAGAAACTCTATACTGAATGGGAGTCGGTGTCTGGGACAGGCGATACTAGCTCGGGTTCCAAACATACTGCTTGCGGCATATATCAACAATAATCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGCTAAAAGGAATTGCTCCATCTTACACAACTTGGGAGCTCCTCACGTGGGGTTATTTGAAGGAGAATCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAATGCTGATGAGAGATTGGTTAAACAAGTGTGTAAGAAACTTGAGGAGGAGGGTAACATTGAATGGGCAGAAAAGTTATTGATTGTTCTTAGGAATGCAGGTCATGCTAATACTGAGATTTACAATTCTCTTTTGCGCACTTGTGCAAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAAAAGGATGATGTTCAGTTGGATGAAGAGACTCGTGAGCTTATAAAATTGACCAGCAAGATGTGTGTGAGTGATGTTTCGAGCACTGTTTACTACGAAACCCGAAAAACCGACCAAACTGAT

mRNA sequence

ATTTTGTTGAATGTTTATACTTTGCAAAATGACGTTGAAGCTGCAGAAAATATTCTCCTCGAGATGAAGAAGATGAAAATCGAACGGGACTGGGTAACATTAAGCACATTAACTAATCTGTATTCCAAAAAGCAACTTACTGAAAAAGCATCATCTACTTTGAAGGAAATGGAGAAAATGGCATCTAAAAGAAACAGAATCACATTTTCCTCTCTTCTTAGCCTATACACCAATTTGGGGGATAAGGATGGAGTTTGGATGATATGGAAAAAGATGAATACGTCGTTCCGAAAGATGAGTGATAGTGAGACTTGCATGATATCTTCTCTCGTGAAACTCCACGAGCTAGAGGAGGCCGAGAAACTCTATACTGAATGGGAGTCGGTGTCTGGGACAGGCGATGCTCGGGTTCCAAACATACTGCTTGCGGCATATATCAACAATAATCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGCTAAAAGGAATTGCTCCATCTTACACAACTTGGGAGCTCCTCACGTGGGGTTATTTGAAGGAGAATCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAATGCTGATGAGAGATTGGTTAAACAAGTGTGTAAGAAACTTGAGGAGGAGGGTAACATTGAATGGGCAGAAAAGTTATTGATTGTTCTTAGGAATGCAGGTCATGCTAATACTGAGATTTACAATTCTCTTTTGCGCACTTGTGCAAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAAAAGGATGATGTTCAGTTGGATGAAGAGACTCGTGAGCTTATAAAATTGACCAGCAAGATGTGTGTGAGTGATGTTTCGAGCACTGTTTACTACGAAACCCGAAAAACCGACCAAACTGAT

Coding sequence (CDS)

ATTTTGTTGAATGTTTATACTTTGCAAAATGACGTTGAAGCTGCAGAAAATATTCTCCTCGAGATGAAGAAGATGAAAATCGAACGGGACTGGGTAACATTAAGCACATTAACTAATCTGTATTCCAAAAAGCAACTTACTGAAAAAGCATCATCTACTTTGAAGGAAATGGAGAAAATGGCATCTAAAAGAAACAGAATCACATTTTCCTCTCTTCTTAGCCTATACACCAATTTGGGGGATAAGGATGGAGTTTGGATGATATGGAAAAAGATGAATACGTCGTTCCGAAAGATGAGTGATAGTGAGACTTGCATGATATCTTCTCTCGTGAAACTCCACGAGCTAGAGGAGGCCGAGAAACTCTATACTGAATGGGAGTCGGTGTCTGGGACAGGCGATGCTCGGGTTCCAAACATACTGCTTGCGGCATATATCAACAATAATCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGCTAAAAGGAATTGCTCCATCTTACACAACTTGGGAGCTCCTCACGTGGGGTTATTTGAAGGAGAATCAGATGGAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAATGCTGATGAGAGATTGGTTAAACAAGTGTGTAAGAAACTTGAGGAGGAGGGTAACATTGAATGGGCAGAAAAGTTATTGATTGTTCTTAGGAATGCAGGTCATGCTAATACTGAGATTTACAATTCTCTTTTGCGCACTTGTGCAAAAGCTGGTAAAATGCCACTCATAGTTGCTGAAAGAATGGAAAAGGATGATGTTCAGTTGGATGAAGAGACTCGTGAGCTTATAAAATTGACCAGCAAGATGTGTGTGAGTGATGTTTCGAGCACTGTTTACTACGAAACCCGAAAAACCGACCAAACTGAT

Protein sequence

ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSETCMISSLVKLHELEEAEKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYETRKTDQTD

Homology

[Close]

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.8e-93
Identity = 172/294 (58.50%), Postives = 228/294 (77.55%), Query Frame = 0


Query: 3   LNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMAS 62
           L  +   NDVE AE + L+ K+ K+  DWVT S LTNLY+K    EKA   LKEMEK+ S
Sbjct: 238 LTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 297

Query: 63  KRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEAEK 122
           K+NR+ ++SL+SL+ NLGDKDGV + WKK+ +SF+KM+D+E   MIS++VKL E E+A+ 
Sbjct: 298 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 357

Query: 123 LYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYL 182
           LY EWESVSGTGDAR+PN++LA Y+N +++   E FY+R+  KGI PSY+TWE+LTW YL
Sbjct: 358 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 417

Query: 183 KENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANT 242
           K   MEKVL  F  A+ SVKKW  + RLVK  CK+LEE+GN++ AEKL+ +L+ AG+ NT
Sbjct: 418 KRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNT 477

Query: 243 EIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTV 296
           ++YNSLLRT AKAG+M LIV ERM KD+V+LDEET+ELI+LTS+M V+++SST+
Sbjct: 478 QLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531

[Close]

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-33
Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 12  VEAAENILLEMKKMK-IERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRITFS 71
           V A E +  EM   K +E  W +L TL N+Y K    EKA   L++ EKM ++ NR+ + 
Sbjct: 229 VAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYF 288

Query: 72  SLLSLYTNLGDKDGVWMIWKKMNTSFRKMS-DSETCMISSLVKLHELEEAEKLYTEWESV 131
            L++LY +LG+K+GV  +W+   +   ++S  +  C++SSLVK  +LEEAE++++EWE+ 
Sbjct: 289 FLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQ 348

Query: 132 SGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQMEKV 191
               D RV N+LL AY+ N ++ +AES +  +  +G  P+Y TWE+L  G++K   MEK 
Sbjct: 349 CFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKA 408

Query: 192 LHFFKNAVGSVKK--WNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANTEIYNSL 251
           +         +++  W     +V  + +  E+E  IE A   +  L   G A+  +Y  L
Sbjct: 409 IDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLL 468

Query: 252 LRTCAKAGKMPLIVAERMEKD 269
           LR    A +    + E M+ D
Sbjct: 469 LRMHEHAKRPAYDIYEMMKLD 489

[Close]

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 80/241 (33.20%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 12  VEAAENILLEMKK-MKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRITFS 71
           VE  E +  +MK  + I  +W T ST+  +Y K   TEKA   L+++E   + RNRI + 
Sbjct: 255 VEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYH 314

Query: 72  SLLSLYTNLGDKDGVWMIWKKMNTSFRKMSD-SETCMISSLVKLHELEEAEKLYTEWESV 131
            LLSLY +LG+K  ++ +W    +    + +     ++SSLV++ ++E AEK+Y EW  V
Sbjct: 315 YLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPV 374

Query: 132 SGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQMEKV 191
             + D R+PN+L+ AY+ N+Q+E AE  +D M   G  PS +TWE+L  G+ ++  + + 
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434

Query: 192 LHFFKNAVGS--VKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANTEIYNSL 249
           L   +NA  +     W     ++    K  EEE ++   E +L +LR +G    + Y +L
Sbjct: 435 LTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLAL 494

[Close]

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 83/283 (29.33%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 10  NDVEAAENILLEMKK-MKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRIT 69
           ND+   E ++ EM +  ++  DW T S + ++Y    L++KA   L+E+E   ++R+   
Sbjct: 207 NDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTA 266

Query: 70  FSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSD-SETCMISSLVKLHELEEAEKLYTEWE 129
           +  L++LY  LG    V+ IW+ +  +  K S+ +   MI  LVKL++L  AE L+ EW+
Sbjct: 267 YQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQ 326

Query: 130 SVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQME 189
           +   T D R+ N+L+ AY     +++A    ++   +G   +  TWE+    Y+K   M 
Sbjct: 327 ANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMA 386

Query: 190 KVLHFFKNAV----GSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRN-AGHANTE 249
           + L     AV    G   KW      V+ +    E++ ++  AE LL +L+N   +   E
Sbjct: 387 RALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAE 446

Query: 250 IYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSK 286
           I+  L+RT A AGK    +  R++ ++V+++E T++L+   S+
Sbjct: 447 IFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEVSQ 489

[Close]

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.4e-27
Identity = 80/290 (27.59%), Postives = 146/290 (50.34%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEM-KKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEK 60
           I +N +    D+E     L +M ++  I  DW T +     Y      ++A   LK  E 
Sbjct: 201 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 260

Query: 61  MASKRNRITFSSLLSLYTNLGDKDGVWMIWK-KMNTSFRKMSDSETCMISSLVKLHELEE 120
              K++   ++ L++LY  LG K  V  +W  + +   R+++     ++ SLVK+  L E
Sbjct: 261 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 320

Query: 121 AEKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTW 180
           AE++ TEW+S     D RVPN ++  YI  +  E+AE+  + ++ +G A +  +WEL+  
Sbjct: 321 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 380

Query: 181 GYLKENQMEKVLHFFKNAVG---SVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRN 240
            Y ++  +E      K A+G     +KW     LV  V   + +EG+++  E  +  LRN
Sbjct: 381 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 440

Query: 241 AGHANTEIYNSLLRTCAKAGKMPL-IVAERMEKDDVQLDEETRELIKLTS 285
               N ++Y++L++   + G   +  + +RM+ D +++DEET  ++   S
Sbjct: 441 CIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTRS 490

[Close]

BLAST of MC09g0705.1 vs. NCBI nr
Match: XP_022150266.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 558 bits (1439), Expect = 2.60e-196
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKA+STLKEMEKM
Sbjct: 219 LLLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKM 278

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRITFSSLLSLYTNLGDKDG W IWKKM TSFRKMSDSE TCMISS+VKLHELEEA
Sbjct: 279 ASKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEA 338

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYINNNQMEQAESFY+RMSLKGI PSYTTWELLTWG
Sbjct: 339 EKLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 398

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIE AEKLLIVLRNAGH 
Sbjct: 399 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHV 458

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           NTEIYNSLLRT AKAGKMPLIVAERMEKDDV+LDEETRELIKLTSKMCVS+VSST YYET
Sbjct: 459 NTEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYET 518

Query: 301 RKTDQTD 306
           RKTDQTD
Sbjct: 519 RKTDQTD 525

[Close]

BLAST of MC09g0705.1 vs. NCBI nr
Match: XP_022150265.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 558 bits (1439), Expect = 5.37e-196
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKA+STLKEMEKM
Sbjct: 240 LLLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKM 299

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRITFSSLLSLYTNLGDKDG W IWKKM TSFRKMSDSE TCMISS+VKLHELEEA
Sbjct: 300 ASKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEA 359

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYINNNQMEQAESFY+RMSLKGI PSYTTWELLTWG
Sbjct: 360 EKLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 419

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIE AEKLLIVLRNAGH 
Sbjct: 420 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHV 479

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           NTEIYNSLLRT AKAGKMPLIVAERMEKDDV+LDEETRELIKLTSKMCVS+VSST YYET
Sbjct: 480 NTEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYET 539

Query: 301 RKTDQTD 306
           RKTDQTD
Sbjct: 540 RKTDQTD 546

[Close]

BLAST of MC09g0705.1 vs. NCBI nr
Match: XP_023515290.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1278), Expect = 2.29e-173
Identity = 257/307 (83.71%), Postives = 282/307 (91.86%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKA+STLK MEKM
Sbjct: 118 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKM 177

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRI+FSSLLSLYTNLGDKDGV  IWKKMN+SFRKM+DSE  CMISSLVKL +LEEA
Sbjct: 178 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEA 237

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYIN NQ +QAESFYDRM+LKGI PSYTTWELLTWG
Sbjct: 238 EKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWG 297

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVL FFKNAVGSVKKWNADERLVK VCK+LEE+GN E AE+LLI+LRNAGH 
Sbjct: 298 YLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHV 357

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERME+D+VQL+EE+REL+KLTSKMCVS+VSST Y+E 
Sbjct: 358 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEA 417

Query: 301 RKTDQTD 306
           +KT++TD
Sbjct: 418 QKTNETD 424

[Close]

BLAST of MC09g0705.1 vs. NCBI nr
Match: KAG7027261.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497 bits (1280), Expect = 4.97e-172
Identity = 258/307 (84.04%), Postives = 282/307 (91.86%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKA+STLK+MEKM
Sbjct: 220 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKM 279

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRI+FSSLLSLYTNLGDKDGV  IWKKMN+SFRKM+DSE TCMISSLVKL +LEEA
Sbjct: 280 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYTCMISSLVKLDKLEEA 339

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYIN NQ +QAESFYDRM+LKGI PSYTTWELLTWG
Sbjct: 340 EKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWG 399

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVL FFKNAVGSVKKWNADERLVK VCK+LEE+GN E AE+LLI+LRNAGH 
Sbjct: 400 YLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHV 459

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERME+D+VQL+EE+REL+KLTSKMCVS+VSST Y+E 
Sbjct: 460 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEA 519

Query: 301 RKTDQTD 306
           +KT  TD
Sbjct: 520 QKTHATD 526

[Close]

BLAST of MC09g0705.1 vs. NCBI nr
Match: XP_023515289.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1278), Expect = 7.64e-172
Identity = 257/307 (83.71%), Postives = 282/307 (91.86%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKA+STLK MEKM
Sbjct: 220 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKM 279

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRI+FSSLLSLYTNLGDKDGV  IWKKMN+SFRKM+DSE  CMISSLVKL +LEEA
Sbjct: 280 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEA 339

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYIN NQ +QAESFYDRM+LKGI PSYTTWELLTWG
Sbjct: 340 EKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWG 399

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVL FFKNAVGSVKKWNADERLVK VCK+LEE+GN E AE+LLI+LRNAGH 
Sbjct: 400 YLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHV 459

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERME+D+VQL+EE+REL+KLTSKMCVS+VSST Y+E 
Sbjct: 460 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEA 519

Query: 301 RKTDQTD 306
           +KT++TD
Sbjct: 520 QKTNETD 526

[Close]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL
Match: A0A6J1DB09 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 1.26e-196
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKA+STLKEMEKM
Sbjct: 219 LLLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKM 278

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRITFSSLLSLYTNLGDKDG W IWKKM TSFRKMSDSE TCMISS+VKLHELEEA
Sbjct: 279 ASKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEA 338

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYINNNQMEQAESFY+RMSLKGI PSYTTWELLTWG
Sbjct: 339 EKLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 398

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIE AEKLLIVLRNAGH 
Sbjct: 399 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHV 458

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           NTEIYNSLLRT AKAGKMPLIVAERMEKDDV+LDEETRELIKLTSKMCVS+VSST YYET
Sbjct: 459 NTEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYET 518

Query: 301 RKTDQTD 306
           RKTDQTD
Sbjct: 519 RKTDQTD 525

[Close]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL
Match: A0A6J1D809 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 2.60e-196
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKA+STLKEMEKM
Sbjct: 240 LLLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKM 299

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRITFSSLLSLYTNLGDKDG W IWKKM TSFRKMSDSE TCMISS+VKLHELEEA
Sbjct: 300 ASKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEA 359

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYINNNQMEQAESFY+RMSLKGI PSYTTWELLTWG
Sbjct: 360 EKLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 419

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIE AEKLLIVLRNAGH 
Sbjct: 420 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHV 479

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           NTEIYNSLLRT AKAGKMPLIVAERMEKDDV+LDEETRELIKLTSKMCVS+VSST YYET
Sbjct: 480 NTEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYET 539

Query: 301 RKTDQTD 306
           RKTDQTD
Sbjct: 540 RKTDQTD 546

[Close]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL
Match: A0A6J1KUT7 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111497797 PE=4 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 1.96e-171
Identity = 255/307 (83.06%), Postives = 283/307 (92.18%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKA+STLK+MEKM
Sbjct: 220 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKM 279

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRI+FSSLLSLYTNLGDKDGV  IWKKMN+SFRKM+DSE  CMISSLVKL +LE+A
Sbjct: 280 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDA 339

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYIN NQM+QAESFYDRM+LKGI PSYTTWELLTWG
Sbjct: 340 EKLYTEWESVSGTGDTRVPNILLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWG 399

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVL FFKNAVGSVKKWNADERLVK VCK+LEE+GN E  E+LLI+LRNAGH 
Sbjct: 400 YLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHV 459

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERME+D+VQL+EE+REL+KLT+KMCVS+VSST Y+E 
Sbjct: 460 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEA 519

Query: 301 RKTDQTD 306
           +KT++TD
Sbjct: 520 QKTNETD 526

[Close]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL
Match: A0A6J1H967 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461204 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 2.78e-171
Identity = 256/307 (83.39%), Postives = 282/307 (91.86%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKA+STLK+MEKM
Sbjct: 220 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKM 279

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           ASKRNRI+FSSLLSLYTNLGDKDGV  IWKKMN+SFRKM+DSE  CMISSLVKL +LEEA
Sbjct: 280 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEA 339

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGTGD RVPNILLAAYIN NQ +QAESFYDRM+LKGI PSYTTWELLTWG
Sbjct: 340 EKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIIPSYTTWELLTWG 399

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVL FFKNAVGSVKKWN DERLVK VCK+LEE+GN E AE+LLI+LRNAGH 
Sbjct: 400 YLKENQMEKVLQFFKNAVGSVKKWNVDERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHV 459

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERME+D+VQL+EE+REL+KLTSKMCVS+VSST Y+E 
Sbjct: 460 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEA 519

Query: 301 RKTDQTD 306
           +KT++TD
Sbjct: 520 QKTNKTD 526

[Close]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL
Match: A0A5D3D4M6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00090 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 4.17e-165
Identity = 247/307 (80.46%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKM 60
           +LLNV TLQND EAAENI LEMKK K++ DW++ STL NLY KKQLTEKA++TLKEMEKM
Sbjct: 223 LLLNVCTLQNDAEAAENIFLEMKKTKVQPDWLSFSTLANLYCKKQLTEKAAATLKEMEKM 282

Query: 61  ASKRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEA 120
           A KRNR++FSSLLSLYTNLGDK+ V  IWKK+ +SFRKMSDSE  CM+SSLVKL+ELEEA
Sbjct: 283 AFKRNRLSFSSLLSLYTNLGDKNEVRRIWKKLKSSFRKMSDSEYMCMVSSLVKLNELEEA 342

Query: 121 EKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWG 180
           EKLYTEWESVSGT D R+ N++LAAYIN NQMEQAESFY+RMSLKGI PSYTTWELLTWG
Sbjct: 343 EKLYTEWESVSGTRDTRISNVMLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 402

Query: 181 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHA 240
           YLKENQMEKVLHFFKNAVGSVKKWNADERLVK VCKKLEE+GNIE  E+LL++LRNAGH 
Sbjct: 403 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKGVCKKLEEQGNIEGVEQLLVILRNAGHV 462

Query: 241 NTEIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTVYYET 300
           +TEIYNSLLRT AKAGKMPLIVAERMEKD+VQL++ETREL++LTSKMCVS+VSST+Y   
Sbjct: 463 DTEIYNSLLRTYAKAGKMPLIVAERMEKDNVQLNDETRELLRLTSKMCVSEVSSTLY--- 522

Query: 301 RKTDQTD 306
            KTDQT+
Sbjct: 523 DKTDQTN 526

[Close]

BLAST of MC09g0705.1 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 344.0 bits (881), Expect = 1.3e-94
Identity = 172/294 (58.50%), Postives = 228/294 (77.55%), Query Frame = 0


Query: 3   LNVYTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMAS 62
           L  +   NDVE AE + L+ K+ K+  DWVT S LTNLY+K    EKA   LKEMEK+ S
Sbjct: 238 LTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 297

Query: 63  KRNRITFSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSDSE-TCMISSLVKLHELEEAEK 122
           K+NR+ ++SL+SL+ NLGDKDGV + WKK+ +SF+KM+D+E   MIS++VKL E E+A+ 
Sbjct: 298 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 357

Query: 123 LYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYL 182
           LY EWESVSGTGDAR+PN++LA Y+N +++   E FY+R+  KGI PSY+TWE+LTW YL
Sbjct: 358 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 417

Query: 183 KENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANT 242
           K   MEKVL  F  A+ SVKKW  + RLVK  CK+LEE+GN++ AEKL+ +L+ AG+ NT
Sbjct: 418 KRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNT 477

Query: 243 EIYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSKMCVSDVSSTV 296
           ++YNSLLRT AKAG+M LIV ERM KD+V+LDEET+ELI+LTS+M V+++SST+
Sbjct: 478 QLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531

[Close]

BLAST of MC09g0705.1 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-34
Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 12  VEAAENILLEMKKMK-IERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRITFS 71
           V A E +  EM   K +E  W +L TL N+Y K    EKA   L++ EKM ++ NR+ + 
Sbjct: 229 VAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYF 288

Query: 72  SLLSLYTNLGDKDGVWMIWKKMNTSFRKMS-DSETCMISSLVKLHELEEAEKLYTEWESV 131
            L++LY +LG+K+GV  +W+   +   ++S  +  C++SSLVK  +LEEAE++++EWE+ 
Sbjct: 289 FLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQ 348

Query: 132 SGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQMEKV 191
               D RV N+LL AY+ N ++ +AES +  +  +G  P+Y TWE+L  G++K   MEK 
Sbjct: 349 CFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKA 408

Query: 192 LHFFKNAVGSVKK--WNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANTEIYNSL 251
           +         +++  W     +V  + +  E+E  IE A   +  L   G A+  +Y  L
Sbjct: 409 IDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLL 468

Query: 252 LRTCAKAGKMPLIVAERMEKD 269
           LR    A +    + E M+ D
Sbjct: 469 LRMHEHAKRPAYDIYEMMKLD 489

[Close]

BLAST of MC09g0705.1 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 8.9e-32
Identity = 80/241 (33.20%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 12  VEAAENILLEMKK-MKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRITFS 71
           VE  E +  +MK  + I  +W T ST+  +Y K   TEKA   L+++E   + RNRI + 
Sbjct: 255 VEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYH 314

Query: 72  SLLSLYTNLGDKDGVWMIWKKMNTSFRKMSD-SETCMISSLVKLHELEEAEKLYTEWESV 131
            LLSLY +LG+K  ++ +W    +    + +     ++SSLV++ ++E AEK+Y EW  V
Sbjct: 315 YLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPV 374

Query: 132 SGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQMEKV 191
             + D R+PN+L+ AY+ N+Q+E AE  +D M   G  PS +TWE+L  G+ ++  + + 
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434

Query: 192 LHFFKNAVGS--VKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRNAGHANTEIYNSL 249
           L   +NA  +     W     ++    K  EEE ++   E +L +LR +G    + Y +L
Sbjct: 435 LTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLAL 494

[Close]

BLAST of MC09g0705.1 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 83/283 (29.33%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 10  NDVEAAENILLEMKK-MKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEKMASKRNRIT 69
           ND+   E ++ EM +  ++  DW T S + ++Y    L++KA   L+E+E   ++R+   
Sbjct: 207 NDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTA 266

Query: 70  FSSLLSLYTNLGDKDGVWMIWKKMNTSFRKMSD-SETCMISSLVKLHELEEAEKLYTEWE 129
           +  L++LY  LG    V+ IW+ +  +  K S+ +   MI  LVKL++L  AE L+ EW+
Sbjct: 267 YQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQ 326

Query: 130 SVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTWGYLKENQME 189
           +   T D R+ N+L+ AY     +++A    ++   +G   +  TWE+    Y+K   M 
Sbjct: 327 ANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMA 386

Query: 190 KVLHFFKNAV----GSVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRN-AGHANTE 249
           + L     AV    G   KW      V+ +    E++ ++  AE LL +L+N   +   E
Sbjct: 387 RALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAE 446

Query: 250 IYNSLLRTCAKAGKMPLIVAERMEKDDVQLDEETRELIKLTSK 286
           I+  L+RT A AGK    +  R++ ++V+++E T++L+   S+
Sbjct: 447 IFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEVSQ 489

[Close]

BLAST of MC09g0705.1 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 6.0e-28
Identity = 80/290 (27.59%), Postives = 146/290 (50.34%), Query Frame = 0


Query: 1   ILLNVYTLQNDVEAAENILLEM-KKMKIERDWVTLSTLTNLYSKKQLTEKASSTLKEMEK 60
           I +N +    D+E     L +M ++  I  DW T +     Y      ++A   LK  E 
Sbjct: 201 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 260

Query: 61  MASKRNRITFSSLLSLYTNLGDKDGVWMIWK-KMNTSFRKMSDSETCMISSLVKLHELEE 120
              K++   ++ L++LY  LG K  V  +W  + +   R+++     ++ SLVK+  L E
Sbjct: 261 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 320

Query: 121 AEKLYTEWESVSGTGDARVPNILLAAYINNNQMEQAESFYDRMSLKGIAPSYTTWELLTW 180
           AE++ TEW+S     D RVPN ++  YI  +  E+AE+  + ++ +G A +  +WEL+  
Sbjct: 321 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 380

Query: 181 GYLKENQMEKVLHFFKNAVG---SVKKWNADERLVKQVCKKLEEEGNIEWAEKLLIVLRN 240
            Y ++  +E      K A+G     +KW     LV  V   + +EG+++  E  +  LRN
Sbjct: 381 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 440

Query: 241 AGHANTEIYNSLLRTCAKAGKMPL-IVAERMEKDDVQLDEETRELIKLTS 285
               N ++Y++L++   + G   +  + +RM+ D +++DEET  ++   S
Sbjct: 441 CIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTRS 490

The following BLAST results are available for this feature:

BLAST of MC09g0705.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY07	1.8e-93	58.50	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q3E911	2.1e-33	34.10	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
Q8LPS6	1.3e-30	33.20	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
O22714	1.6e-30	29.33	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q84JR3	8.4e-27	27.59	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]

BLAST of MC09g0705.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150266.1	2.60e-196	94.46	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 ...	[more]
XP_022150265.1	5.37e-196	94.46	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]
XP_023515290.1	2.29e-173	83.71	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 ...	[more]
KAG7027261.1	4.97e-172	84.04	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_023515289.1	7.64e-172	83.71	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]

BLAST of MC09g0705.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DB09	1.26e-196	94.46	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 ...	[more]
A0A6J1D809	2.60e-196	94.46	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]
A0A6J1KUT7	1.96e-171	83.06	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A6J1H967	2.78e-171	83.39	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A5D3D4M6	4.17e-165	80.46	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of MC09g0705.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02820.1	1.3e-94	58.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G27460.1	1.5e-34	34.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	8.9e-32	33.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.2e-31	29.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	6.0e-28	27.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	PANTHER	PTHR45717:SF45	OS12G0527900 PROTEIN	coord: 2..281
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 2..281
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 1..26 e-value: 0.43 score: 10.9 coord: 32..59 e-value: 0.089 score: 13.1 coord: 67..92 e-value: 0.3 score: 11.4 coord: 139..166 e-value: 0.004 score: 17.3 coord: 104..126 e-value: 0.077 score: 13.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 139..169 e-value: 5.3E-5 score: 21.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 134..168 score: 9.952918
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 101..220 e-value: 7.0E-17 score: 63.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..100 e-value: 1.9E-15 score: 59.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g0705	MC09g0705	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g0705.1-cds	MC09g0705.1-cds-MC09:6546969..6547484	CDS
MC09g0705.1-cds	MC09g0705.1-cds-MC09:6547489..6547581	CDS
MC09g0705.1-cds	MC09g0705.1-cds-MC09:6547586..6547894	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g0705.1	MC09g0705.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding