MC08g_new0281.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0281.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 14855553 .. 14855994 (-)
Sequence length	366
RNA-Seq Expression	MC08g_new0281.1
Synteny	MC08g_new0281.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGTTACCTACTATCTCACCATAAAACCTCTTGGGTAAGGAGTGGGTCGACGCCGAGGAGGTTCAGGCATCCAAAACTGAGTTCGAATGTCCTTATGCTTGCTATTCTGATGTTAAAAGCGATGGGTAATGCTGGCTTCAGTCTAAATAGGGGTGGGTACCGCGAATCGAACTCCGGACAGGTGTGGGTAAGCGTCTAAAGTCGTCGAGGGGAAGCAAAGGCCGCAGATCGGGGCTGTGGGTCGTCGTCGGAGCGCGCACGTCCACAGGCTGCCGTCGGAACGCCGCAGAAACGGCACAGCCACTGCAGAAAACCGGAACCGCCCCGAGTTTGGGTTCCAGACCCGTGTGAGACGTCGGAAAAGGGCTGAAGGCGCGCCGCTGCTGCCGTCGACGACTGCTGCAGAAGTTCCAAGTCGCGCCGCCGTTCGGGATTGA

mRNA sequence

ATGATCCGTTACCTACTATCTCACCATAAAACCTCTTGGGTAAGGAGTGGGTCGACGCCGAGGAGGTTCAGGCATCCAAAACTGAGTTCGAATGTCCTTATGCTTGCTATTCTGATGTTAAAAGCGATGGTCGTCGAGGGGAAGCAAAGGCCGCAGATCGGGGCTGTGGGTCGTCGTCGGAGCGCGCACGTCCACAGGCTGCCGTCGGAACGCCGCAGAAACGGCACAGCCACTGCAGAAAACCGGAACCGCCCCGAGTTTGGGTTCCAGACCCGTGTGAGACGTCGGAAAAGGGCTGAAGGCGCGCCGCTGCTGCCGTCGACGACTGCTGCAGAAGTTCCAAGTCGCGCCGCCGTTCGGGATTGA

Coding sequence (CDS)

ATGATCCGTTACCTACTATCTCACCATAAAACCTCTTGGGTAAGGAGTGGGTCGACGCCGAGGAGGTTCAGGCATCCAAAACTGAGTTCGAATGTCCTTATGCTTGCTATTCTGATGTTAAAAGCGATGGTCGTCGAGGGGAAGCAAAGGCCGCAGATCGGGGCTGTGGGTCGTCGTCGGAGCGCGCACGTCCACAGGCTGCCGTCGGAACGCCGCAGAAACGGCACAGCCACTGCAGAAAACCGGAACCGCCCCGAGTTTGGGTTCCAGACCCGTGTGAGACGTCGGAAAAGGGCTGAAGGCGCGCCGCTGCTGCCGTCGACGACTGCTGCAGAAGTTCCAAGTCGCGCCGCCGTTCGGGATTGA

Protein sequence

MIRYLLSHHKTSWVRSGSTPRRFRHPKLSSNVLMLAILMLKAMVVEGKQRPQIGAVGRRRSAHVHRLPSERRRNGTATAENRNRPEFGFQTRVRRRKRAEGAPLLPSTTAAEVPSRAAVRD

Homology

The following BLAST results are available for this feature:

BLAST of MC08g_new0281.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0281.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0281.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0281.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g_new0281	MC08g_new0281	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g_new0281.1-cds	MC08g_new0281.1-cds-MC08:14855553..14855788	CDS
MC08g_new0281.1-cds	MC08g_new0281.1-cds-MC08:14855865..14855994	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g_new0281.1	MC08g_new0281.1-protein	polypeptide