MC08g_new0269.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0269.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 14568529 .. 14570871 (-)
Sequence length	597
RNA-Seq Expression	MC08g_new0269.1
Synteny	MC08g_new0269.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTTCAGGAAAGACCTTCAGGTTGGCCATCGGGGAAGACCTTTAGGTTGGCCTTCAGGGAAGGCCTTGGTGAGGTCAATCTCAAAGAAGAAGTTTAGATCGGCCACCAGGGAAGACCTCAGGTCGGCCATCAGAGCAGACCTTCAGGTCGGCCTTTAGGGGAGATCTTCAGGTCGGCCACCGGGGAAGACCTTCTAAGTGACTGGGCGTTTTATGCTGAACGCACGCACTAAGCGTGGTAACAATTATATAGATGCAAGCGCACACCTGTCAGAGTAATATAAAATGGATGGAGTATCCAAGTATCGATCCTCAAGGACTTCTAAATAATTTCCAAACTCTGAAGTTTTAAAGAATAGTGAATGTTGAAATGAGTGATTCTTGTAAAATGGGAAATGGTCACAAATAATGGTTTTGGATTTGGGATTTGGACTTATAATAATAAAACCTAGCCCGAATTACTTCAAGTTAGCCAACAAAGAATCAAGGACATGCTAAGGATAATATGCATTTCACTTTAGGAACCAACGACTACGCTTTTCACTTGACTTATGTCTAAGCAAGTTCAAAGTCCTAAGACATTCCCTAATATGTCTATTACGAGAGATATCTTAGTTTTAGGATGGAAATAGTCGCAACCTCGGGTTAAGGTCCTATGTCTAGGCTACTTAAGCGGAACCCTTATGTCTAAGGCGCTCCTCTCCTCGGTTTATCCACTCAACAATGCAAATAAGCAACCTTTTCAGTATTGACTTGTTAAGACTTACAGTGGCCTTCTCTAAATCCTAACTTTTTGGGAAAACATGTTGAGCAATGAATGGAAAGCAAAAACACTACTTCTTAGCAACCCTTTTTAGACATAAAAGGCTAACTATCCATAACCGGGCTAGAGACGGGAATTTAGAAAGACATATTGAAGAAAATACAGCAAGTAAAATGGTTGAATGTGGAATGCATGTGTGAAAAACGAAAGTTAACTAACGGAGAGTTTTTATCGGGATTGAGAGCTTCGCCCTTCTCTTTCAAGCAAGGGAGAGTGTCACGTGCTCTTTCCTCCAAAAACACAACTCTCTTAACTAAAAATAAAGTAAAGGCAAAGAGAAGATAAGCAAAGTGCTAGATTTTTATATATTTGAATAAGTAGAAAATAACTAAGTACAAATGGAAACAAAACAAAGCTCAATAAAAGAATGTAAAGTACTCGGGATTTAAAAACCAAAAGCAACTAATGAAAGCAACTCAAAAGTACTTAGAGAGCAACAAAGAAACACTAAAAATGATCAAGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGGTAGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCCTTTGACTGACCAAATCGTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAACCTGTTTTGCTGCAGGCATCCCAGGCGCCTGGCGCCTCCCATGTAACTTTTTCGTCTTTTTGCTTCTTTTGATTAATTTGCACTCTCAAATGGTCCTAAAATGTCATAAATACAATATAAGCCATCGACAAACCATAGTATATGAATTTTGCATGAATTGGAACTCAAACGATCGAGAAAAATCCGAAACAAAGCTGAAACATAGTAAAAACAGCATCTAAAACCTTCTTTTTACGCATGTAAACAAGCGTAATCACTAAGTTTGACCTCTCTCTATCTTACATGTAGTAGTACGATTTTCACCTCGAAACATTGGCCCCCTCTCTGACTGATCCGAGTTCGACCGGGCAGAAAAGTTTTTCCTGGGTTTGAAAATCCATTTAAGTGGTGACTTACCTCTTTCTAGTTCGGCCTAAGTTGGCCGTTTAAGAGTATGAGGTAAGAGCTTGGACAAGCTCGACCTAAGCTGAGCACTTAGGAGTATGAGGTAAGAGCTTGGAGAAGCTCGGCCTAACCTGGGCCCTTAGGGGTTTGAGGGAAGAGCTTGGAGAAATTCGACCTAACGTTTGGAGTTTAAGGTAAGAGCTCGGAGAAGCTCGACCTAAGCGGAGAGGTTAGAGGTTTGACTTGCATACTTTGTATTTGGTGGCCTCCATTGGACTGAAGGTCGACAGCACCTAAGTTGGGTTTGTCATGTTCGCTCAAATATGATCAAATGATAGAAGTTCTTCCTCTAGATGAGGATGAACTACCTGATCAAAGCTCTTCCTCTAGGCGGGGTCGAGCTGAGATGAAAGCTCTTCCTTTAGACGAGATGAGCTGA

mRNA sequence

ATGATCTTCAGGAAAGACCTTCAGGTTGGCCATCGGGGAAGACCTTTAGGTTGGCCTTCAGGGAAGGCCTTGGTGAGGTCAATCTCAAAGAAGAAGTTTAGATCGGCCACCAGGGAAGACCTCAGGTCGGCCATCAGAGCAGACCTTCAGGTAGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCCTTTGACTGACCAAATCGTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAACCTGTTTTGCTGCAGGCATCCCAGGCGCCTGGCGCCTCCCATAGCTTGGAGAAGCTCGGCCTAACCTGGGCCCTTAGGGGTTTGAGGGAAGAGCTTGGAGAAATTCGACCTAACGTTTGGAGTTTAAGGTCGACAGCACCTAAGTTGGGTTTGTCATGTTCGCTCAAATATGATCAAATGATAGAAGTTCTTCCTCTAGATGAGGATGAACTACCTGATCAAAGCTCTTCCTCTAGGCGGGGTCGAGCTGAGATGAAAGCTCTTCCTTTAGACGAGATGAGCTGA

Coding sequence (CDS)

ATGATCTTCAGGAAAGACCTTCAGGTTGGCCATCGGGGAAGACCTTTAGGTTGGCCTTCAGGGAAGGCCTTGGTGAGGTCAATCTCAAAGAAGAAGTTTAGATCGGCCACCAGGGAAGACCTCAGGTCGGCCATCAGAGCAGACCTTCAGGTAGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCCTTTGACTGACCAAATCGTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAACCTGTTTTGCTGCAGGCATCCCAGGCGCCTGGCGCCTCCCATAGCTTGGAGAAGCTCGGCCTAACCTGGGCCCTTAGGGGTTTGAGGGAAGAGCTTGGAGAAATTCGACCTAACGTTTGGAGTTTAAGGTCGACAGCACCTAAGTTGGGTTTGTCATGTTCGCTCAAATATGATCAAATGATAGAAGTTCTTCCTCTAGATGAGGATGAACTACCTGATCAAAGCTCTTCCTCTAGGCGGGGTCGAGCTGAGATGAAAGCTCTTCCTTTAGACGAGATGAGCTGA

Protein sequence

MIFRKDLQVGHRGRPLGWPSGKALVRSISKKKFRSATREDLRSAIRADLQVGPKTMVNHPFPTPLTDQIVLKLIVEHFFYTYASVGTTKTHWKTRFIKGKVGRKPVLLQASQAPGASHSLEKLGLTWALRGLREELGEIRPNVWSLRSTAPKLGLSCSLKYDQMIEVLPLDEDELPDQSSSSRRGRAEMKALPLDEMS

Homology

The following BLAST results are available for this feature:

BLAST of MC08g_new0269.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0269.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0269.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0269.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g_new0269	MC08g_new0269	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g_new0269.1-cds	MC08g_new0269.1-cds-MC08:14568529..14568685	CDS
MC08g_new0269.1-cds	MC08g_new0269.1-cds-MC08:14568774..14568859	CDS
MC08g_new0269.1-cds	MC08g_new0269.1-cds-MC08:14569310..14569513	CDS
MC08g_new0269.1-cds	MC08g_new0269.1-cds-MC08:14570722..14570871	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g_new0269.1	MC08g_new0269.1-protein	polypeptide