MC08g1629.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1629.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat
Location	MC08: 24181500 .. 24182390 (-)
Sequence length	891
RNA-Seq Expression	MC08g1629.1
Synteny	MC08g1629.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTCTTTTAGGAAGTTTAAGAAGTTTGTTCCTGAGTTTGATGTGGCCTGCTTCAATGCCTTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGACGGATGCGAGGAATGTGTATCACGGTATGAAGAGTAAGTTTAGACCGAACTTGCAGACGTTTAACATATTATTGTCGGGTTGGAAGTCCTCGGAAGAAGCCGAGGGATTCTTTGATGAGATGAGAGAAATGGGGGTCAAGCCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAAAACAGGGAAATGGACAAGGCGTACAAGGTTGTTGAGAGAATGCAGGATGAGGATATACATGCTGATGTGATTACGTACACTAGTATCATTGGGGGACTCGGGTTGATCGGTCAACCAGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTATCCTGATGTTGCAGCTTATAATGCTGCGATACGAAATTTCTGCATTGCGAAGAGGCTTCGCGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTTTGAGTCCAAATGCTACTACATACAACTTGTTCTTTAGGATCTTCTTCTGGTCAAATGACTTGCAAAGCTCGTGGAACTTGTACCGGCGAATGATGGATACGGGGTGCTTGCCTAATACGCAGTCCTGCTTGTTTCTAATGAGGTTATTTAAGAAGCATGAAAAGGTAGAAATGGCACTGGAGCTATGGAATGACATGGTAGTAAGGGGATTTGGATCTTATATATTAGTATCTGAGGAGTTATTTGATCTTCTCTGTGATTTGGGAAAGTTGGTGGAAGCAGAGATGTGTTTTCTGCAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATC

mRNA sequence

GAGTCTTTTAGGAAGTTTAAGAAGTTTGTTCCTGAGTTTGATGTGGCCTGCTTCAATGCCTTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGACGGATGCGAGGAATGTGTATCACGGTATGAAGAGTAAGTTTAGACCGAACTTGCAGACGTTTAACATATTATTGTCGGGTTGGAAGTCCTCGGAAGAAGCCGAGGGATTCTTTGATGAGATGAGAGAAATGGGGGTCAAGCCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAAAACAGGGAAATGGACAAGGCGTACAAGGTTGTTGAGAGAATGCAGGATGAGGATATACATGCTGATGTGATTACGTACACTAGTATCATTGGGGGACTCGGGTTGATCGGTCAACCAGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTATCCTGATGTTGCAGCTTATAATGCTGCGATACGAAATTTCTGCATTGCGAAGAGGCTTCGCGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTTTGAGTCCAAATGCTACTACATACAACTTGTTCTTTAGGATCTTCTTCTGGTCAAATGACTTGCAAAGCTCGTGGAACTTGTACCGGCGAATGATGGATACGGGGTGCTTGCCTAATACGCAGTCCTGCTTGTTTCTAATGAGGTTATTTAAGAAGCATGAAAAGGTAGAAATGGCACTGGAGCTATGGAATGACATGGTAGTAAGGGGATTTGGATCTTATATATTAGTATCTGAGGAGTTATTTGATCTTCTCTGTGATTTGGGAAAGTTGGTGGAAGCAGAGATGTGTTTTCTGCAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATC

Coding sequence (CDS)

GAGTCTTTTAGGAAGTTTAAGAAGTTTGTTCCTGAGTTTGATGTGGCCTGCTTCAATGCCTTGTTGAGAACTCTGTGCCAGGAGAAGAGTATGACGGATGCGAGGAATGTGTATCACGGTATGAAGAGTAAGTTTAGACCGAACTTGCAGACGTTTAACATATTATTGTCGGGTTGGAAGTCCTCGGAAGAAGCCGAGGGATTCTTTGATGAGATGAGAGAAATGGGGGTCAAGCCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAAAACAGGGAAATGGACAAGGCGTACAAGGTTGTTGAGAGAATGCAGGATGAGGATATACATGCTGATGTGATTACGTACACTAGTATCATTGGGGGACTCGGGTTGATCGGTCAACCAGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTATCCTGATGTTGCAGCTTATAATGCTGCGATACGAAATTTCTGCATTGCGAAGAGGCTTCGCGAGGCTTTTGATTTGATGGATGAAATGGTGAATAAGGGTTTGAGTCCAAATGCTACTACATACAACTTGTTCTTTAGGATCTTCTTCTGGTCAAATGACTTGCAAAGCTCGTGGAACTTGTACCGGCGAATGATGGATACGGGGTGCTTGCCTAATACGCAGTCCTGCTTGTTTCTAATGAGGTTATTTAAGAAGCATGAAAAGGTAGAAATGGCACTGGAGCTATGGAATGACATGGTAGTAAGGGGATTTGGATCTTATATATTAGTATCTGAGGAGTTATTTGATCTTCTCTGTGATTTGGGAAAGTTGGTGGAAGCAGAGATGTGTTTTCTGCAGATGGTAGATAAGGGGCATAAGCCTAGTAACGTCTCGTTTAAAAGGATC

Protein sequence

ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI

Homology

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BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot
Match: Q9FZ19 (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 470.3 bits (1209), Expect = 1.6e-131
Identity = 218/298 (73.15%), Postives = 261/298 (87.58%), Query Frame = 0


Query: 1   ESFRKFKKFVPE-FDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW 60
           ESF KFK+ VP+ FD ACFNALLRTLCQEKSMTDARNVYH +K +F+P+LQTFNILLSGW
Sbjct: 165 ESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW 224

Query: 61  KSSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITY 120
           KSSEEAE FF+EM+  G+KPDVV+YN L+DVYCK+RE++KAYK++++M++E+   DVITY
Sbjct: 225 KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITY 284

Query: 121 TSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVN 180
           T++IGGLGLIGQPDKAR +LKEMKEYGCYPDVAAYNAAIRNFCIA+RL +A  L+DEMV 
Sbjct: 285 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVK 344

Query: 181 KGLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEM 240
           KGLSPNATTYNLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL+++FK+HEKV+M
Sbjct: 345 KGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDM 404

Query: 241 ALELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 298
           A+ LW DMVV+GFGSY LVS+ L DLLCDL K+ EAE C L+MV+KGH+PSNVSFKRI
Sbjct: 405 AMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462

[Close]

BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.9e-40
Identity = 88/291 (30.24%), Postives = 154/291 (52.92%), Query Frame = 0


Query: 14  DVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW---KSSEEAEGFFD 73
           D+A FN +L  LC+ K +  A  ++  ++ +F  +  T+N++L+GW   K + +A     
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219

Query: 74  EMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGLGLIG 133
           EM E G+ P++ +YN ++  + +  ++  A++    M+  D   DV+TYT+++ G G+ G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279

Query: 134 QPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNATTYN 193
           +  +ARN+  EM   G  P VA YNA I+  C    +  A  + +EMV +G  PN TTYN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339

Query: 194 LFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWNDM--- 253
           +  R  F + +      L +RM + GC PN Q+   ++R + +  +VE AL L+  M   
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399

Query: 254 -VVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 298
             +    +Y ++   +F +      +V A    L+MV++G  P   +F R+
Sbjct: 400 DCLPNLDTYNILISGMF-VRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRV 449

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BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 8.4e-40
Identity = 99/298 (33.22%), Postives = 161/298 (54.03%), Query Frame = 0


Query: 2   SFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW-- 61
           +F  +K+F  E  +  F +LL  LC+ K+++DA ++    K K+  + ++FNI+L+GW  
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278

Query: 62  --KSSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVI 121
              S  EAE  + EM  +GVK DVVSY+ ++  Y K   ++K  K+ +RM+ E I  D  
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338

Query: 122 TYTSIIGGLGLIGQPDKARNILKEM-KEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDE 181
            Y +++  L       +ARN++K M +E G  P+V  YN+ I+  C A++  EA  + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398

Query: 182 MVNKGLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEK 241
           M+ KGL P   TY+ F RI     ++   + L  +M   GC P  ++ + L+R   +   
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRD 458

Query: 242 VEMALELWNDMVVRGFG----SYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPS 291
            +  L LW++M  +  G    SYI++   LF      GK+ EA   + +M DKG +P+
Sbjct: 459 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF----LNGKIEEAYGYYKEMKDKGMRPN 509

[Close]

BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot
Match: Q9M2C8 (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX=3702 GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-38
Identity = 94/304 (30.92%), Postives = 157/304 (51.64%), Query Frame = 0


Query: 1   ESFRKFKK--FVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSG 60
           E+F K +K  F  +F V  FN LLR  C E+ M +AR+++  + S+F P+++T NILL G
Sbjct: 160 EAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLG 219

Query: 61  WKSSEE---AEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHAD 120
           +K + +    E F+ EM + G KP+ V+Y   +D +CK R   +A ++ E M   D    
Sbjct: 220 FKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDIT 279

Query: 121 VITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMD 180
           V   T++I G G+     KAR +  E+ + G  PD  AYNA + +      +  A  +M 
Sbjct: 280 VQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMK 339

Query: 181 EMVNKGLSPNATTYNLFFRIFFWSND--LQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKK 240
           EM  KG+ P++ T++  F     S +         Y++M +   +P T + + LM+LF  
Sbjct: 340 EMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCH 399

Query: 241 HEKVEMALELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVS 298
           + +V + L+LW  M+ +G+  +    E L   LC   +  +A  C  Q V++G   S   
Sbjct: 400 NGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPV 459

[Close]

BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot
Match: Q9LFM6 (Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g11310 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 88/291 (30.24%), Postives = 156/291 (53.61%), Query Frame = 0


Query: 14  DVACFNALLRTLCQEKSMTDA----RNVYHGMKSKFRPNLQTFNILLSGW---KSSEEAE 73
           ++     LL  LC+E  + +A      +   M S + P+++ FNILL+GW   +  ++AE
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270

Query: 74  GFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGL 133
             ++EM+ M VKP VV+Y  L++ YC+ R +  A +V+E M+  ++  + + +  II GL
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330

Query: 134 GLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNA 193
           G  G+  +A  +++        P +  YN+ ++NFC A  L  A  ++  M+ +G+ P  
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390

Query: 194 TTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWND 253
           TTYN FF+ F   N  +   NLY ++++ G  P+  +   ++++  +  K+ +A+++  +
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450

Query: 254 MVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 298
           M  RG    +L +  L  LLC L  L EA   F   V +G  P  ++FK I
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501

[Close]

BLAST of MC08g1629.1 vs. NCBI nr
Match: XP_022157025.1 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 [Momordica charantia])

HSP 1 Score: 608 bits (1569), Expect = 7.19e-217
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK
Sbjct: 159 ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 218

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT
Sbjct: 219 SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 278

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK
Sbjct: 279 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 338

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA
Sbjct: 339 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 398

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           LELWNDMVVRGFGSYILVSEELFDLL DLGKLVEAEMCFLQMVDKGHKPSNVSFKRI
Sbjct: 399 LELWNDMVVRGFGSYILVSEELFDLLXDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 455

[Close]

BLAST of MC08g1629.1 vs. NCBI nr
Match: XP_022157024.1 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 [Momordica charantia])

HSP 1 Score: 608 bits (1569), Expect = 1.23e-216
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK
Sbjct: 159 ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 218

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT
Sbjct: 219 SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 278

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK
Sbjct: 279 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 338

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA
Sbjct: 339 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 398

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           LELWNDMVVRGFGSYILVSEELFDLL DLGKLVEAEMCFLQMVDKGHKPSNVSFKRI
Sbjct: 399 LELWNDMVVRGFGSYILVSEELFDLLXDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 455

[Close]

BLAST of MC08g1629.1 vs. NCBI nr
Match: XP_022948942.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moschata])

HSP 1 Score: 585 bits (1509), Expect = 2.35e-207
Identity = 280/297 (94.28%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDV CFNALLRTLCQEKSMTDARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 165 ESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWK 224

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGV+PDVVSYNCLVDVYCKNREMDKA+KV+E+M+DEDI ADVITYT
Sbjct: 225 SSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYT 284

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NK
Sbjct: 285 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANK 344

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GL+PNATTYNLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKVEMA
Sbjct: 345 GLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMA 404

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           L+LWNDMV RGFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPSNVSFKRI
Sbjct: 405 LQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRI 461

[Close]

BLAST of MC08g1629.1 vs. NCBI nr
Match: XP_023522207.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584 bits (1505), Expect = 9.55e-207
Identity = 278/297 (93.60%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDV CFNALLRTLCQEKSMTDARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 165 ESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWK 224

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGV+PDVVSYNCLVDVYCKNREMDKA+KV+E+M+DEDI ADVITYT
Sbjct: 225 SSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYT 284

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NK
Sbjct: 285 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMTNK 344

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GL+PNATTYNLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEK++MA
Sbjct: 345 GLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKIDMA 404

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           L+LWNDMV RGFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPSNVSFKRI
Sbjct: 405 LQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRI 461

[Close]

BLAST of MC08g1629.1 vs. NCBI nr
Match: XP_022998430.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita maxima])

HSP 1 Score: 583 bits (1502), Expect = 2.73e-206
Identity = 278/297 (93.60%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRK KKFVPEFDV CFNALLRTLCQEKSMTDARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 165 ESFRKLKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWK 224

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGV+PDVVSYNCL+DVYCKNREMDKA+KV+E+M+DEDI ADVITYT
Sbjct: 225 SSEEAEGFFDEMREMGVQPDVVSYNCLIDVYCKNREMDKAFKVIEKMRDEDIAADVITYT 284

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NK
Sbjct: 285 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANK 344

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GL+PNATTYNLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKVEMA
Sbjct: 345 GLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMA 404

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           L+LWNDMV RGFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPSNVSFKRI
Sbjct: 405 LQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRI 461

[Close]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL
Match: A0A6J1DS00 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023850 PE=4 SV=1)

HSP 1 Score: 608 bits (1569), Expect = 3.48e-217
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK
Sbjct: 159 ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 218

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT
Sbjct: 219 SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 278

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK
Sbjct: 279 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 338

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA
Sbjct: 339 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 398

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           LELWNDMVVRGFGSYILVSEELFDLL DLGKLVEAEMCFLQMVDKGHKPSNVSFKRI
Sbjct: 399 LELWNDMVVRGFGSYILVSEELFDLLXDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 455

[Close]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL
Match: A0A6J1DVB2 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023850 PE=4 SV=1)

HSP 1 Score: 608 bits (1569), Expect = 5.95e-217
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK
Sbjct: 159 ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 218

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT
Sbjct: 219 SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 278

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK
Sbjct: 279 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 338

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA
Sbjct: 339 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 398

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           LELWNDMVVRGFGSYILVSEELFDLL DLGKLVEAEMCFLQMVDKGHKPSNVSFKRI
Sbjct: 399 LELWNDMVVRGFGSYILVSEELFDLLXDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 455

[Close]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL
Match: A0A6J1GAM6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita moschata OX=3662 GN=LOC111452441 PE=4 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 1.14e-207
Identity = 280/297 (94.28%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDV CFNALLRTLCQEKSMTDARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 165 ESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWK 224

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGV+PDVVSYNCLVDVYCKNREMDKA+KV+E+M+DEDI ADVITYT
Sbjct: 225 SSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYT 284

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NK
Sbjct: 285 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANK 344

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GL+PNATTYNLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKVEMA
Sbjct: 345 GLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMA 404

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           L+LWNDMV RGFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPSNVSFKRI
Sbjct: 405 LQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRI 461

[Close]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL
Match: A0A6J1KCH6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxima OX=3661 GN=LOC111493066 PE=4 SV=1)

HSP 1 Score: 583 bits (1502), Expect = 1.32e-206
Identity = 278/297 (93.60%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRK KKFVPEFDV CFNALLRTLCQEKSMTDARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 165 ESFRKLKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWK 224

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEMREMGV+PDVVSYNCL+DVYCKNREMDKA+KV+E+M+DEDI ADVITYT
Sbjct: 225 SSEEAEGFFDEMREMGVQPDVVSYNCLIDVYCKNREMDKAFKVIEKMRDEDIAADVITYT 284

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NK
Sbjct: 285 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANK 344

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GL+PNATTYNLFFRIFFWSNDLQSSWNLYRRMMD GCLPNTQSCLFLMR FK+HEKVEMA
Sbjct: 345 GLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMA 404

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           L+LWNDMV RGFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPSNVSFKRI
Sbjct: 405 LQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMVDKGHKPSNVSFKRI 461

[Close]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL
Match: A0A1S3BIE0 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489902 PE=4 SV=1)

HSP 1 Score: 568 bits (1463), Expect = 1.50e-201
Identity = 272/297 (91.58%), Postives = 286/297 (96.30%), Query Frame = 0


Query: 1   ESFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGWK 60
           ESFRKFKKFVPEFDV CFNALLRTLCQEKSM DARNVYHG+KSKFRPNLQTFNILLSGWK
Sbjct: 108 ESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWK 167

Query: 61  SSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYT 120
           SSEEAEGFFDEM EMGVKPDVVSYN LVDVYCKNREMDKA+KVVE+M+DEDI ADVITYT
Sbjct: 168 SSEEAEGFFDEMIEMGVKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYT 227

Query: 121 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNK 180
           SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNA IRNFCIAKRL EAFDL+DEMVNK
Sbjct: 228 SIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNK 287

Query: 181 GLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMA 240
           GLSPNATTYNLFFRIFFWSNDL+S+WNLYRRMMDTGCLPNTQSCLFL+RLFKK+EK +MA
Sbjct: 288 GLSPNATTYNLFFRIFFWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMA 347

Query: 241 LELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 297
           LELWNDM+ +GFGSYILVSEELFDLLCDLGKL+EAE CFLQMVDKGHKPS+ SFKRI
Sbjct: 348 LELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSHTSFKRI 404

[Close]

BLAST of MC08g1629.1 vs. TAIR 10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-132
Identity = 218/298 (73.15%), Postives = 261/298 (87.58%), Query Frame = 0


Query: 1   ESFRKFKKFVPE-FDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW 60
           ESF KFK+ VP+ FD ACFNALLRTLCQEKSMTDARNVYH +K +F+P+LQTFNILLSGW
Sbjct: 165 ESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW 224

Query: 61  KSSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITY 120
           KSSEEAE FF+EM+  G+KPDVV+YN L+DVYCK+RE++KAYK++++M++E+   DVITY
Sbjct: 225 KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITY 284

Query: 121 TSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVN 180
           T++IGGLGLIGQPDKAR +LKEMKEYGCYPDVAAYNAAIRNFCIA+RL +A  L+DEMV 
Sbjct: 285 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVK 344

Query: 181 KGLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEM 240
           KGLSPNATTYNLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL+++FK+HEKV+M
Sbjct: 345 KGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDM 404

Query: 241 ALELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 298
           A+ LW DMVV+GFGSY LVS+ L DLLCDL K+ EAE C L+MV+KGH+PSNVSFKRI
Sbjct: 405 AMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462

[Close]

BLAST of MC08g1629.1 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 6.0e-41
Identity = 99/298 (33.22%), Postives = 161/298 (54.03%), Query Frame = 0


Query: 2   SFRKFKKFVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW-- 61
           +F  +K+F  E  +  F +LL  LC+ K+++DA ++    K K+  + ++FNI+L+GW  
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278

Query: 62  --KSSEEAEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVI 121
              S  EAE  + EM  +GVK DVVSY+ ++  Y K   ++K  K+ +RM+ E I  D  
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338

Query: 122 TYTSIIGGLGLIGQPDKARNILKEM-KEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDE 181
            Y +++  L       +ARN++K M +E G  P+V  YN+ I+  C A++  EA  + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398

Query: 182 MVNKGLSPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEK 241
           M+ KGL P   TY+ F RI     ++   + L  +M   GC P  ++ + L+R   +   
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRD 458

Query: 242 VEMALELWNDMVVRGFG----SYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPS 291
            +  L LW++M  +  G    SYI++   LF      GK+ EA   + +M DKG +P+
Sbjct: 459 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF----LNGKIEEAYGYYKEMKDKGMRPN 509

[Close]

BLAST of MC08g1629.1 vs. TAIR 10
Match: AT3G61360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-39
Identity = 94/304 (30.92%), Postives = 157/304 (51.64%), Query Frame = 0


Query: 1   ESFRKFKK--FVPEFDVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSG 60
           E+F K +K  F  +F V  FN LLR  C E+ M +AR+++  + S+F P+++T NILL G
Sbjct: 160 EAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLG 219

Query: 61  WKSSEE---AEGFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHAD 120
           +K + +    E F+ EM + G KP+ V+Y   +D +CK R   +A ++ E M   D    
Sbjct: 220 FKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDIT 279

Query: 121 VITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMD 180
           V   T++I G G+     KAR +  E+ + G  PD  AYNA + +      +  A  +M 
Sbjct: 280 VQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMK 339

Query: 181 EMVNKGLSPNATTYNLFFRIFFWSND--LQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKK 240
           EM  KG+ P++ T++  F     S +         Y++M +   +P T + + LM+LF  
Sbjct: 340 EMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCH 399

Query: 241 HEKVEMALELWNDMVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVS 298
           + +V + L+LW  M+ +G+  +    E L   LC   +  +A  C  Q V++G   S   
Sbjct: 400 NGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPV 459

[Close]

BLAST of MC08g1629.1 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 77/237 (32.49%), Postives = 131/237 (55.27%), Query Frame = 0


Query: 14  DVACFNALLRTLCQEKSMTDARNVYHGMKSKFRPNLQTFNILLSGW---KSSEEAEGFFD 73
           D+A FN +L  LC+ K +  A  ++  ++ +F  +  T+N++L+GW   K + +A     
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219

Query: 74  EMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGLGLIG 133
           EM E G+ P++ +YN ++  + +  ++  A++    M+  D   DV+TYT+++ G G+ G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279

Query: 134 QPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNATTYN 193
           +  +ARN+  EM   G  P VA YNA I+  C    +  A  + +EMV +G  PN TTYN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339

Query: 194 LFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWNDM 248
           +  R  F + +      L +RM + GC PN Q+   ++R + +  +VE AL L+  M
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396

[Close]

BLAST of MC08g1629.1 vs. TAIR 10
Match: AT5G11310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 9.5e-39
Identity = 88/291 (30.24%), Postives = 156/291 (53.61%), Query Frame = 0


Query: 14  DVACFNALLRTLCQEKSMTDA----RNVYHGMKSKFRPNLQTFNILLSGW---KSSEEAE 73
           ++     LL  LC+E  + +A      +   M S + P+++ FNILL+GW   +  ++AE
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270

Query: 74  GFFDEMREMGVKPDVVSYNCLVDVYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGL 133
             ++EM+ M VKP VV+Y  L++ YC+ R +  A +V+E M+  ++  + + +  II GL
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330

Query: 134 GLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNA 193
           G  G+  +A  +++        P +  YN+ ++NFC A  L  A  ++  M+ +G+ P  
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390

Query: 194 TTYNLFFRIFFWSNDLQSSWNLYRRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWND 253
           TTYN FF+ F   N  +   NLY ++++ G  P+  +   ++++  +  K+ +A+++  +
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450

Query: 254 MVVRGFGSYILVSEELFDLLCDLGKLVEAEMCFLQMVDKGHKPSNVSFKRI 298
           M  RG    +L +  L  LLC L  L EA   F   V +G  P  ++FK I
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501

The following BLAST results are available for this feature:

BLAST of MC08g1629.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ19	1.6e-131	73.15	Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th...	[more]
Q9S7R4	4.9e-40	30.24	Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop...	[more]
Q9LFQ4	8.4e-40	33.22	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
Q9M2C8	3.5e-38	30.92	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX...	[more]
Q9LFM6	1.3e-37	30.24	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidop...	[more]

BLAST of MC08g1629.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157025.1	7.19e-217	99.66	putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 [Momor...	[more]
XP_022157024.1	1.23e-216	99.66	putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 [Momor...	[more]
XP_022948942.1	2.35e-207	94.28	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moscha...	[more]
XP_023522207.1	9.55e-207	93.60	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo s...	[more]
XP_022998430.1	2.73e-206	93.60	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita maxima...	[more]

BLAST of MC08g1629.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS00	3.48e-217	99.66	putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Mom...	[more]
A0A6J1DVB2	5.95e-217	99.66	putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Mom...	[more]
A0A6J1GAM6	1.14e-207	94.28	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita mosc...	[more]
A0A6J1KCH6	1.32e-206	93.60	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxi...	[more]
A0A1S3BIE0	1.50e-201	91.58	putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Cuc...	[more]

BLAST of MC08g1629.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02420.1	1.1e-132	73.15	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G15010.1	6.0e-41	33.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G61360.1	2.5e-39	30.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74900.1	5.6e-39	32.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G11310.1	9.5e-39	30.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 59..77 e-value: 0.27 score: 11.6 coord: 227..252 e-value: 0.0075 score: 16.5 coord: 262..286 e-value: 0.082 score: 13.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 149..194 e-value: 6.0E-13 score: 48.8 coord: 79..126 e-value: 3.0E-14 score: 52.9 coord: 14..58 e-value: 7.7E-8 score: 32.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 263..290 e-value: 9.2E-4 score: 17.2 coord: 153..186 e-value: 6.6E-8 score: 30.3 coord: 59..81 e-value: 4.0E-4 score: 18.4 coord: 117..151 e-value: 4.3E-9 score: 34.0 coord: 17..44 e-value: 1.1E-4 score: 20.2 coord: 82..115 e-value: 1.6E-9 score: 35.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 14..44 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 185..219 score: 9.580234
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 115..149 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 80..114 score: 11.91499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 150..184 score: 11.925952
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 200..297 e-value: 2.1E-13 score: 52.4 coord: 110..199 e-value: 4.2E-25 score: 90.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..109 e-value: 1.5E-28 score: 102.1
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..297
None	No IPR available	PANTHER	PTHR47933:SF29	OS03G0208600 PROTEIN	coord: 1..297
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 90..292

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g1629	MC08g1629	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g1629.1-cds	MC08g1629.1-cds-MC08:24181500..24182390	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g1629.1	MC08g1629.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding