MC08g1398.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCTAATGGCGAGAGGTTGAATTAAAAATTATATATATTTTTATAATAGATTCATAATACAAAGAGACACTGATGTGTAACTACTTGAACCGTACACCCATCCTCCATTTCACTATAAAATGGGTCGCTTGGTTCCACCTATTGATGTGCAGAGAGAGGCTTTTTTTGTTTGAGTATATATTAATATTTTAGGTTGAAAAATGGGTTCGGTTCATGATCCGGAGGCCGGCGACGGTTACCGCAGCGGCGGCGCTGCCACCGCCGACGTGGAGGAGTTCGTGTCAGTAGAAAACCCAGACTCCAAACTCTCCAAGTTTGGATCTATCTTCCAAAACCTTTACCCTCCTGGGTTTTCCCGAAAGGTACCTTAAAATCATCAAACAAACAATTGACCCTTTTCCTTTGTCCTTTTGTTTTTATTTTTTTTGGGAAAAATCATTCCCTGGTGGAGTAGAATGAAAATTTCTATCTCCTGTCGCTGACGAAATTTTTAGAATTGAAAGATTATATACATAAAAGTGAAAATTTATGGCTTTGCCTCTTGATATGGTGTTCAGCTGGTGGCGGAAGTGATAGCGACATATTTGCTGGTGTTTGTGACGTGCGGGGCGGGGGCATTGAGCGCGAGCGACGAGCGGAGAGTGTCGCAGCTCGGAGCCTCAGTCGCGGGCGGGCTGATCGTCACCGTGATGATCTACGCTGTCGGCCACATATCGGGCGCCCACATGAACCCGGCTGTCACCTTAGCTTTCGCTGCAACTCGACACTTTCCATGGAAACAGGTCTCAGTCCATACACTTTTTTTTTCTTTCCCTTTTGATGCAATTCTCAGTTATTTCTGTTATAATCAATAACCTAATCATTTGCTCTCACATGCTATCTTGTCGGTTTTATTATCCAGTAACATTCGTGTTTTCTTTTTTCCTTTATCGTGACCCATTTTTTAGATCTTGTTTGATTCCTAAATATTTTATTTTATTTTATTTGATACTTGTACTTCAATTTTTTTTTTCATTGAAATTTATTATCCATCTCTTTAAATGTTGCATAAAAAATATTTCTCATTTGCATGATCTATAATCATCAATCTATGATTGACAAATGTTTGAAACCACATATATTAGATTAGTTGTTGGCGAGTCTTAATTTTTTTTCTTGTTCTTTTAAATAATTGATGAATCTTTTTAAGTAAAATTTGGAGATGAAAATCAATCACTTGAATGTTAAAGGACTAAAAATAAAATAAAAGAAATTTGAAGTACTAAATATAGGAGTTAAACTTAAATTTATTGAATAAAACTATATTATTTATTTATTTTACTAATATCGAAATGAATAATTATTTAATTCAAGTAAATAAATTATTAAATAATATGTCAATAATGATAAGAGCTGATTTTAATAGAGCTAGTTGAATAAAAAACATAATAATTTATAATAAATGAACACGTATCTTATGTTTTTACTGATAATATATACAAATGGTTTTTTAAATGAATATTATTTAATTATCAAATTGATGTGTTAGAATAATTATTTGATATAGTAGAGCCTATTTGTTTGAGGTTTATTATTAATATTCAGGTGCGGTGCCAAGTACAGAGGACCCGGCATCTATTTCCCATTAATTTTGAATTATATAAATTCAATTTCAAATATTTTTTCTCCTTGATTATCCCATACAAATTGAAATTTAAAATTTGTCCTCACTTTCAAGTTTTCCTGAACAACTTATTTTTACAGTTCAGTTTTCAAGTTGTTGTTTACTTTCATGCCTTTATAACAACTATTTTGTTTTTAATTTTTTAGTTTTTAAAAATTTTGTATAATTAAACACTTCCTTTTGTTTTGCATTTACTTTTAAAAACATTTTCAAAATCAAAGCTAAAATTTAAAAACTTAAAAAAGTAGTTTTCAAAAACTTAATTTTATTTTTAAGATGATGAAACATACCATTTTAAGATGGTGAAAACATATCAACGGGGATTGTAACCAAACAAGACTGATTTTCAAAAACAGAAAATTAAAAATGAAATAGTTATCAAACATGTCCTCACTTTCAAATCGTTACTAAAACATGATATTGAGTATGATTCTATGATTAAGTGATGGTCAATCTGAACCTAATTCAACTGTACCAACATCCAGTGTCTTTCCTATAAGTCATAAGCTCGAAGCAATCGAGTGAATAACACTATTTTGACTAATAATTTAAACATAAATTTTGTGGGGTTGAAAAATGAACCCTTTTTTCCATGTGTAGTTTTGAAGTCCTAGAAGTAGATCATTATATTCATGATATAGAGAGGAAATGGAATAATGGACATGATGACAATAAAAAAGGGAAAAATCTAGGCCATATTTAGTGGCCAACATGAGGTAGGGTCCAGCCCAAATATTATTCTTGAGACCTCACGCAGCCACAAGACTTGTGATTTTTCCATGGCCATGAGCCTTTGGCCTCACTCCGCCGGCCACAAGAATGGGATGGGACATGAGCCATATGATAGCTCCAGAACACTTGAGAGAGGGATAGAGATGTCCACCAAACATTTTCTTGGCCCATTGGGAGTGGGGGTAGTATAGGACAACATGATATAATAATTCATGTGTGTGTTTTACTGTTTAGAGTCAAAAGAGCAGTGGACGTCTTTTAACTTTGCTTTTAGAATTAAAGAATTTCAAAGTAGTGTTGATAACCATTTTGTTTTCGGGTTTTTCTTTTTGAAAGTGTTTCTTTCCCTCATGTTTTCCGTTGTTAGTGTTATATAGTTTTTTAAACATTTTCATCTCTAGGCCAAATTTTGTTTTCATTTTTTAAAGTTTCAAAAACTTATTTTTGTTCAAGAGAATTAGCTAAGAATTGAAATACGTTTTTAAGAGTGTTGAAAAACTTACTACTGATATTGTAAAAAAAAACAAACATAATTATTAAAAATAGAAAAATAAAAATGAAATAGTTGTTTGGATACTAAGTCGTTGACTTTTAAAGTCCGGTTTCATCTTTGTTAGGAGATGGTACTTTTTGGCTCATAACTTTCGCAAGTCTTTGTTTAAGAGTTTTTATATATTAGAGATAGAAACTGGGTTTATACAACATCTATTGGTTTCGTAGGTTTGTGATTTGTAAATGTAAGATTCAACTTCTGAAGTAGATTTCAAAAGTTTAACTTGGGTTTATGGAAACAGGCTCATGGAAATATCTACTTATACTCTTGTGAAATGTTTGGTTCACAATTTTAATATCTATAAATTTCCCTGACTTGAAATTAAGATTTTTGGGACATGAGTTCGACACCTAGATTAGAAACGTTAAGTTTAGGAATTTAAGTGGAAATCTTCGTAAACCTAGCTAGGTTTAAGAAAATTGTGTGGGAGATGAGTGAGTACTGAAATTTGTCCATCAAATTCTAAACTTAATAAACCTAAACAACAAACATAGGCTAGTTCCACATCTCAAACCAAACCCACACCCTAAACATCCTATATATCAAAGAGGTTCTAGTTTGTACATCTTACATTTCCACTATAAAGAAGAAGTATAATTTATTAAATACGTTGTATCAGTAAGGATATAGGGCCTTGTGATATTTAGATACTTGAGCGGATAGTAGATTTACACAGAAGAGGGCTTCTTTTTTTTTTTTCAAATAGTTAATAAAATTTGGTAATTAAAGAGTTAAAAGGATTGGTTTGGGTGGTGGCAGGTTCCAGCGTATGCAGCAGCGCAGCTGAGTGGAGCAACATCTGCGGCCTTTACGCTGCGAATATTGCTGCATCCAATCAAACACGTGGGCACAACGTCGCCATCCGGATCGGATTTTCAGGCATTGGTCATGGAGATAGTTGTTACATTCTCCATGATGTTCGTTACTTCAGCTGTCGCAACCGACACCAAAGCTGTAAGAATATAATTAATTCTATCCTTTCCTCTCACTTTCTTCATTGTTTCACATGTTCCACGATGATAAACTTACATGACATGTTTGGTCGAAATTTCTTGATTATCTTCTAAATTTCTGTTAACTCGTTTAAGTATCATGTAATAAAGTTTATTATTGTCAACCAATTTTAATATTTACCACTGAAAAAGTGATGTAATTCAAAAGTTTTAAACCATAGAGAATAGATTCTGTTTTTCTTCTTAGGAAAAATTGTTTTCCAAAATTGTATTTATGAAAAAATTAAGGACTAAAGCGCATAATCTTGTAAATGTTGTGAAATTACACTCCACATCATAAATATAATATGTATTTTAAGAAATGTCATAACTTTTCATTTTGTTTTTAATTATAGCATAAATGTGATTTTATTTTGAGTTTATTGCATTTAGCAAACTTGAGTATAGACAAAACAAATCGTGTGTTCAAATTTTTACTATATTTGAAACAAATAATAACTCCAAGTTTAAAAATTAAATAATATTAAATAAAAAAACTGATATACTTATCTCCAATGGTATATATGCGTAGAACAGAATATATCACATCCTAAATTAAAGAATATGTCTGACTAGTTGATGTGTAATTAAATTTTATTCATTTAACAAGTGGTGCTTGATTTTTGGCAGGTGGGAGAGCTAGCAGGTATGGCAGTTGGCTCAGCTGTGTGTATTACATCCATCTTAGCTGGGTAAGGAAACATATAACACATTTTTGGATTGGCTTTTTACCCATAAAAATATTTGATTTCTAATTAACATCTTGAAATAAAACAAATTTTGAAAAGTTTCTAATTTGTTTTACCAAAGAATTTTGAGCATACACATGAAATATTAAACAAATGAATCTAATGGAAGACTTGTGTTAGCCACTGTTCAGACCTGTATCAGGTGGGTCGATGAACCCTGTGAGGACTTTAGGACCTGCAATGGCAAGTGAATATTATAAAGGACTTTGGGTGTACTTTGTCGGGCCGGTTACAGGAACCCTTTTGGGGGCATGGTCATATAAGTTCATACGTGTCAGTGACAAACCTGTGCATCTAATTTCTCCTCATTCATTTTCACTCAAACTTCGAAGAATGTCGAGATCGGACACTGCTGAAAGTGAAAATTGAGCATTAGCTCAACATTCTCTTCTACCATCTTCAAAATGTTTGGTGTGTCGGAAAACATATGTGAAATAGTTTGAGTGTTTCATGAGCTTCGTGATGTACCATGCTCTAAGCTTACTTTCTTAGAGTTTAGCAATGTATAAGAAGTAGCCTTTGTAATTTGCTTAGCATCTTCATTGGTATATTTTCTAAATTTTGTAACTTTCCTTTTCCAAATAATAGCCAAATTCTAGAAATGGAATAGTTCACTTT ATTTTCTAATGGCGAGAGGTTGAATTAAAAATTATATATATTTTTATAATAGATTCATAATACAAAGAGACACTGATGTGTAACTACTTGAACCGTACACCCATCCTCCATTTCACTATAAAATGGGTCGCTTGGTTCCACCTATTGATGTGCAGAGAGAGGCTTTTTTTGTTTGAGTATATATTAATATTTTAGGTTGAAAAATGGGTTCGGTTCATGATCCGGAGGCCGGCGACGGTTACCGCAGCGGCGGCGCTGCCACCGCCGACGTGGAGGAGTTCGTGTCAGTAGAAAACCCAGACTCCAAACTCTCCAAGTTTGGATCTATCTTCCAAAACCTTTACCCTCCTGGGTTTTCCCGAAAGCTGGTGGCGGAAGTGATAGCGACATATTTGCTGGTGTTTGTGACGTGCGGGGCGGGGGCATTGAGCGCGAGCGACGAGCGGAGAGTGTCGCAGCTCGGAGCCTCAGTCGCGGGCGGGCTGATCGTCACCGTGATGATCTACGCTGTCGGCCACATATCGGGCGCCCACATGAACCCGGCTGTCACCTTAGCTTTCGCTGCAACTCGACACTTTCCATGGAAACAGGTTCCAGCGTATGCAGCAGCGCAGCTGAGTGGAGCAACATCTGCGGCCTTTACGCTGCGAATATTGCTGCATCCAATCAAACACGTGGGCACAACGTCGCCATCCGGATCGGATTTTCAGGCATTGGTCATGGAGATAGTTGTTACATTCTCCATGATGTTCGTTACTTCAGCTGTCGCAACCGACACCAAAGCTGTGGGAGAGCTAGCAGGTATGGCAGTTGGCTCAGCTGTGTGTATTACATCCATCTTAGCTGGACCTGTATCAGGTGGGTCGATGAACCCTGTGAGGACTTTAGGACCTGCAATGGCAAGTGAATATTATAAAGGACTTTGGGTGTACTTTGTCGGGCCGGTTACAGGAACCCTTTTGGGGGCATGGTCATATAAGTTCATACGTGTCAGTGACAAACCTGTGCATCTAATTTCTCCTCATTCATTTTCACTCAAACTTCGAAGAATGTCGAGATCGGACACTGCTGAAAGTGAAAATTGAGCATTAGCTCAACATTCTCTTCTACCATCTTCAAAATGTTTGGTGTGTCGGAAAACATATGTGAAATAGTTTGAGTGTTTCATGAGCTTCGTGATGTACCATGCTCTAAGCTTACTTTCTTAGAGTTTAGCAATGTATAAGAAGTAGCCTTTGTAATTTGCTTAGCATCTTCATTGGTATATTTTCTAAATTTTGTAACTTTCCTTTTCCAAATAATAGCCAAATTCTAGAAATGGAATAGTTCACTTT ATGGGTTCGGTTCATGATCCGGAGGCCGGCGACGGTTACCGCAGCGGCGGCGCTGCCACCGCCGACGTGGAGGAGTTCGTGTCAGTAGAAAACCCAGACTCCAAACTCTCCAAGTTTGGATCTATCTTCCAAAACCTTTACCCTCCTGGGTTTTCCCGAAAGCTGGTGGCGGAAGTGATAGCGACATATTTGCTGGTGTTTGTGACGTGCGGGGCGGGGGCATTGAGCGCGAGCGACGAGCGGAGAGTGTCGCAGCTCGGAGCCTCAGTCGCGGGCGGGCTGATCGTCACCGTGATGATCTACGCTGTCGGCCACATATCGGGCGCCCACATGAACCCGGCTGTCACCTTAGCTTTCGCTGCAACTCGACACTTTCCATGGAAACAGGTTCCAGCGTATGCAGCAGCGCAGCTGAGTGGAGCAACATCTGCGGCCTTTACGCTGCGAATATTGCTGCATCCAATCAAACACGTGGGCACAACGTCGCCATCCGGATCGGATTTTCAGGCATTGGTCATGGAGATAGTTGTTACATTCTCCATGATGTTCGTTACTTCAGCTGTCGCAACCGACACCAAAGCTGTGGGAGAGCTAGCAGGTATGGCAGTTGGCTCAGCTGTGTGTATTACATCCATCTTAGCTGGACCTGTATCAGGTGGGTCGATGAACCCTGTGAGGACTTTAGGACCTGCAATGGCAAGTGAATATTATAAAGGACTTTGGGTGTACTTTGTCGGGCCGGTTACAGGAACCCTTTTGGGGGCATGGTCATATAAGTTCATACGTGTCAGTGACAAACCTGTGCATCTAATTTCTCCTCATTCATTTTCACTCAAACTTCGAAGAATGTCGAGATCGGACACTGCTGAAAGTGAAAATTGA MGSVHDPEAGDGYRSGGAATADVEEFVSVENPDSKLSKFGSIFQNLYPPGFSRKLVAEVIATYLLVFVTCGAGALSASDERRVSQLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAATRHFPWKQVPAYAAAQLSGATSAAFTLRILLHPIKHVGTTSPSGSDFQALVMEIVVTFSMMFVTSAVATDTKAVGELAGMAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASEYYKGLWVYFVGPVTGTLLGAWSYKFIRVSDKPVHLISPHSFSLKLRRMSRSDTAESEN Homology
BLAST of MC08g1398.1 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 315.8 bits (808), Expect = 5.0e-85 Identity = 162/273 (59.34%), Postives = 206/273 (75.46%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.5e-85 Identity = 160/246 (65.04%), Postives = 193/246 (78.46%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.4e-84 Identity = 164/279 (58.78%), Postives = 205/279 (73.48%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.7e-83 Identity = 161/253 (63.64%), Postives = 195/253 (77.08%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.1e-82 Identity = 173/292 (59.25%), Postives = 206/292 (70.55%), Query Frame = 0
BLAST of MC08g1398.1 vs. NCBI nr
Match: XP_022149783.1 (aquaporin NIP2-1-like [Momordica charantia]) HSP 1 Score: 563 bits (1451), Expect = 5.42e-202 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of MC08g1398.1 vs. NCBI nr
Match: XP_022983845.1 (aquaporin NIP2-1-like [Cucurbita maxima]) HSP 1 Score: 478 bits (1230), Expect = 2.14e-168 Identity = 247/270 (91.48%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of MC08g1398.1 vs. NCBI nr
Match: NP_001267699.1 (aquaporin NIP2-1-like [Cucumis sativus] >ACU29603.1 Si transport-like protein 1 [Cucumis sativus] >AOW42547.1 silicon transporter Lsi1 [Cucumis sativus] >APT69293.1 LSi1 [Cucumis sativus var. sativus] >KGN59570.1 hypothetical protein Csa_001739 [Cucumis sativus]) HSP 1 Score: 477 bits (1227), Expect = 6.13e-168 Identity = 248/293 (84.64%), Postives = 264/293 (90.10%), Query Frame = 0
BLAST of MC08g1398.1 vs. NCBI nr
Match: XP_023529347.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo] >KAG7022218.1 Aquaporin NIP2-1 [Cucurbita argyrosperma subsp. argyrosperma] >CAD67694.1 Nod26-like protein [Cucurbita pepo]) HSP 1 Score: 476 bits (1226), Expect = 8.70e-168 Identity = 246/274 (89.78%), Postives = 257/274 (93.80%), Query Frame = 0
BLAST of MC08g1398.1 vs. NCBI nr
Match: XP_022934054.1 (aquaporin NIP2-1-like [Cucurbita moschata]) HSP 1 Score: 476 bits (1225), Expect = 1.24e-167 Identity = 246/268 (91.79%), Postives = 255/268 (95.15%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy TrEMBL
Match: A0A6J1D7P6 (aquaporin NIP2-1-like OS=Momordica charantia OX=3673 GN=LOC111018132 PE=3 SV=1) HSP 1 Score: 563 bits (1451), Expect = 2.63e-202 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy TrEMBL
Match: A0A6J1J724 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482339 PE=3 SV=1) HSP 1 Score: 478 bits (1230), Expect = 1.04e-168 Identity = 247/270 (91.48%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy TrEMBL
Match: G8XUV3 (Si transport-like protein 1 OS=Cucumis sativus OX=3659 GN=Csa_3G826640 PE=2 SV=1) HSP 1 Score: 477 bits (1227), Expect = 2.97e-168 Identity = 248/293 (84.64%), Postives = 264/293 (90.10%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy TrEMBL
Match: A0A1L7B7J0 (LSi1 OS=Cucumis sativus var. sativus OX=869827 GN=LSi1 PE=2 SV=1) HSP 1 Score: 477 bits (1227), Expect = 2.97e-168 Identity = 248/293 (84.64%), Postives = 264/293 (90.10%), Query Frame = 0
BLAST of MC08g1398.1 vs. ExPASy TrEMBL
Match: Q7X9T0 (Nod26-like protein OS=Cucurbita pepo OX=3663 GN=NIP1 PE=2 SV=1) HSP 1 Score: 476 bits (1226), Expect = 4.21e-168 Identity = 246/274 (89.78%), Postives = 257/274 (93.80%), Query Frame = 0
BLAST of MC08g1398.1 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-58 Identity = 120/244 (49.18%), Postives = 163/244 (66.80%), Query Frame = 0
BLAST of MC08g1398.1 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 217.2 bits (552), Expect = 1.7e-56 Identity = 123/269 (45.72%), Postives = 171/269 (63.57%), Query Frame = 0
BLAST of MC08g1398.1 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 211.8 bits (538), Expect = 7.2e-55 Identity = 118/245 (48.16%), Postives = 159/245 (64.90%), Query Frame = 0
BLAST of MC08g1398.1 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 207.6 bits (527), Expect = 1.4e-53 Identity = 112/230 (48.70%), Postives = 152/230 (66.09%), Query Frame = 0
BLAST of MC08g1398.1 vs. TAIR 10
Match: AT4G10380.1 (NOD26-like intrinsic protein 5;1 ) HSP 1 Score: 205.3 bits (521), Expect = 6.7e-53 Identity = 104/214 (48.60%), Postives = 147/214 (68.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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