MC07g_new0163.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0163.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 6097630 .. 6098667 (+)
Sequence length	489
RNA-Seq Expression	MC07g_new0163.1
Synteny	MC07g_new0163.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGATTTCGACCTCCACGCTGCTAGACTAAACACACCCGGTGGAATCGAGCGCTGCTGTCGAATTAAAGGCCTCCGATGGTGGAATCGAACGCTGCCGGTTGAATCCAATGCTGGTGAGGGTCGAAGCCTTAAAAAAAGTTATGAAATTATTAACTTCCAAAGGTTGCCAAAAAAGATATTAACTTCTTTTACTAAAGGTGACTCGAAAACCTCCGGAAAATGTTCAAAAACTTTTACTCTTAATTTTTTTTGTTTTTTTATCAGTAAAAAAAAACTTTTACTTTTAATTGAAGGTTATTAAAATCCTCTTAAAAATGCATAAAACCTTTCATGGAACGCTATTAAAAATGTAGAAAAAAGTATATAATACTATATTATTATTAAAAGAAATATAATTTATTTGACTTTATTAAAAAAAGAAGATAAAATTACTTAAAGAAATATCGTTACCCTTTCTCCTCTGTCCTAAATCTCTTTACCCTCTTTCTCCATTGTGAAGAACCGCCGCCCTTTCCTCCATTGTTCAGACCATGCTGCCTGATCATCCGCCACCGCGAATGCTGCTGTATGTCGCCGCTAGTCGCCGCCGGTGAGGATCGAACGCGGCTGTTGAAGATCGACGTCGTTCAACACCGCTGAATCTCGTTGAGGGTCGAACACAGTCGCAGCCGCTTTAGTGTTAAGAGTGCCGGTGAACGCCGTCGCCGCTGGACGCCGGTGAACCCAACTTAATTACCCAATTTTCATTTTTTTGGTTACCATTTTACGTTTTCTCAGCCTGTCTCACTCGCACGACTCCCGACCCCCACGACCTAAAGCACGAACGACACCGTCCCTTTCAGCGTTCCAAGCAAAGATCGGCGGAGACTCCGGCAGCGCGAACGGCGGCGACCCCACGTTGCTGGACAGCAGTACTTTTTTCAAAGATGCACGATTCTTCTGCAATCGAACGGCAACGCCTGTACAACTCAGATCTGAACGACGGCGACCCTACAACGTGAAATCGAGGCGAGCTCCAGGAGTCGAACAGTGA

mRNA sequence

ATGCACGATTTCGACCTCCACGCTGCTAGACTAAACACACCCGGTGGAATCGAGCGCTGCTGTCGAATTAAAGGCCTCCGATGGTGGAATCGAACGCTGCCGGTTGAATCCAATGCTGGTGAGGGTCGAAGCCTTAAAAAAAGTTATGAAATTATTAACTTCCAAAGAACCGCCGCCCTTTCCTCCATTGTTCAGACCATGCTGCCTGATCATCCGCCACCGCGAATGCTGCTCCTGTCTCACTCGCACGACTCCCGACCCCCACGACCTAAAGCACGAACGACACCGTCCCTTTCAGCGTTCCAAGCAAAGATCGGCGGAGACTCCGGCAGCGCGAACGGCGGCGACCCCACGTTGCTGGACAGCAGTACTTTTTTCAAAGATGCACGATTCTTCTGCAATCGAACGGCAACGCCTGTACAACTCAGATCTGAACGACGGCGACCCTACAACGTGAAATCGAGGCGAGCTCCAGGAGTCGAACAGTGA

Coding sequence (CDS)

ATGCACGATTTCGACCTCCACGCTGCTAGACTAAACACACCCGGTGGAATCGAGCGCTGCTGTCGAATTAAAGGCCTCCGATGGTGGAATCGAACGCTGCCGGTTGAATCCAATGCTGGTGAGGGTCGAAGCCTTAAAAAAAGTTATGAAATTATTAACTTCCAAAGAACCGCCGCCCTTTCCTCCATTGTTCAGACCATGCTGCCTGATCATCCGCCACCGCGAATGCTGCTCCTGTCTCACTCGCACGACTCCCGACCCCCACGACCTAAAGCACGAACGACACCGTCCCTTTCAGCGTTCCAAGCAAAGATCGGCGGAGACTCCGGCAGCGCGAACGGCGGCGACCCCACGTTGCTGGACAGCAGTACTTTTTTCAAAGATGCACGATTCTTCTGCAATCGAACGGCAACGCCTGTACAACTCAGATCTGAACGACGGCGACCCTACAACGTGAAATCGAGGCGAGCTCCAGGAGTCGAACAGTGA

Protein sequence

MHDFDLHAARLNTPGGIERCCRIKGLRWWNRTLPVESNAGEGRSLKKSYEIINFQRTAALSSIVQTMLPDHPPPRMLLLSHSHDSRPPRPKARTTPSLSAFQAKIGGDSGSANGGDPTLLDSSTFFKDARFFCNRTATPVQLRSERRRPYNVKSRRAPGVEQ

Homology

The following BLAST results are available for this feature:

BLAST of MC07g_new0163.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0163.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0163.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0163.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC07g_new0163	MC07g_new0163	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC07g_new0163.1-cds	MC07g_new0163.1-cds-MC07:6097630..6097796	CDS
MC07g_new0163.1-cds	MC07g_new0163.1-cds-MC07:6098134..6098199	CDS
MC07g_new0163.1-cds	MC07g_new0163.1-cds-MC07:6098412..6098667	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC07g_new0163.1	MC07g_new0163.1-protein	polypeptide