MC07g_new0083.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0083.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	rRNA N-glycosidase
Location	MC07: 2959014 .. 2961612 (-)
Sequence length	966
RNA-Seq Expression	MC07g_new0083.1
Synteny	MC07g_new0083.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTGGGTAAAGGAGGCGACGGTGACGAGCGGTAATGAAATAAGAAGCGGCGGCAGTGTTGAAAGAGGGAGGAAAGGTGCAGCGTGGGTGACGGCGGCGGCGTGGGTGATAGATGACGGTGTGGTGACCGGTGGCGGCAGCACTGGTGAGCGACGATGACGGCAGCAACGCGAACGGGCAATGGCAGGAATGTGAACGGGCGGCGGCAGCTTCATCAAAGAAAAGAATAAGTGAAGAACGGTTTCAGAAATGGGAGAGAGAATCCGGATTCTGAAACCTAAATAAGGGTTAACCGTGTTGCTAAAAAGAAATATCAGCGACGGCCGTTATAAAACGTCGCTGATAATAATATCAGCGACCCATTTTTGTGGCGGCGCTGCTGATAATAATAACAGCAACACCGTTTACTAACGGCGTCACTAAATAAAACATATCAACGACGTCTATAAAAACTGGGCGCCGTGATAATTACTTTTAGCAACAAATATCCTTTGGTGTCTCTAAAACTGTGTCATTAAAATCCCTGTTTTTGTAGTGAAAATAGGTAAAGGAAGAATGCTGAGGAGTCAATCAAGTAGCACCCAGTTAACAAAGTAGCGTCGGCGCTACTCATGAATTTTCCCTATGCTGCATTTTAAAGATTTTTTTAAGACATTTCACATACAGATTGAAACTTATGATGGAAGTGCATGATATACTTGTAAAGATGAACGAAATGCTTGTTGATTGAAAACAATGTTTAACATAGAAAATTCAATAAAATACGAATCCTAGCTTAACATCCGTCTCTTTCAAGCTTCGAAGGAATTAAAACTCGCTAGAACATTATACGGGATTGAAGTAAATCGAAATACAAGAGAAAATGGTAAAAGAAAAAGTAAACGGATAAAGAAAGTTAAACCAGACTAGAAAGTAAAATAAACTAGAAATGTGGAGAACTAAGAACTTTAAACCCTATAAACTAATGATGCTCCACTGCGGCACAAGTCCTGAGCATTTGTGGAGGTCGAGTACTTGTAACTATCCATCAAAAGGAGGGGAGAAAATTAGTGCTAAAATGGAGAAATTTTTTACCATAACAGATTTCCAACCGACCTCCACAGAGTTCCATTGACTTTATATAAAATGTCTTCGCTGTCCTCCACTTGAAATGACGCGCTTTGCCCATAGTACTAAAATTGTTTATCGAAAACAAGGGTTATCAATAACATTCCTGAGGCTGTCTCACAGACGCATTTGATGGCTAAAAAACAAAGAGATTAAATTAATCAAGAAATTCGAAGAGGATATATAAGAAGAAGACTCGAGCAATTTTTGAGTGGTTCAGCCAAATCGCCTACCCATCCATTCCAATGAATTTATGAGCCCACCGGTCACAGCAGTTAATCAATGTCATTAACTATCTAATTAATAATAACCAACTTTAACTAATAACTAAGTTAGTCACATGCTAGCTCATAACCCACATAAGTCTCAATTTTAACATATCATATTTGATCATTTGTATATATTATTAACATTCTTACTCACTTGTCAAGAGAATAACTCAATGAATGAAGTAGCTATTACCTTCCAAAAGGTAATGATTGATCTCCCTCGTTGAAGAGATCGAGCAGTGGTTAAGAATTTTTTCTTTCAAGAACAAAAAAGAAAATCTAAATGCCATCACCTCTCTATATAAATCAAAGGCTGAGCTGCTATCATGTGCAAACTTATCAAGATGAGGAAACTCACAACACTTTCTCTTCTCCTTGCCATCTTACTTGGCCCTCTTTCAGCCGAGGGTGATGTTAGCTTCCAATTGTCAGGTGCCAACAAAAAATCCTACACAAATTTCATCAAACAGCTGAGGGATGCTGTTCCAACCACAACAACAGTGTGCAAGATACCTGTGCTGCCCTCTACTGCATCCGGCCCAAAATCGTTTACATTCGTCCATCTCACCAATTATGCAGACCAAACCGTCGTGGTCGCAATAAACATAACGAACGTTTACATTGTGGCATATCACATCGATCATGTATCCTACTTTTTTGACGATGCGTCGCCCGAAGCTTACAAAGTGTTATTCGAAGGTACTGATCGTAAAACGCTTCCATATTCTAGTAATTACGATAAACTTCAGAGTATTGTAGGCAAAAAAAGAGATTTGATCGAGCTAGGACTCCCTGCCTTAAGCAGTGCCATTACCAACTTGGTTTACTACGAGTACAAATCTACTGCGGCCGCACTTCTTGTACTCATCCAGTCGGTTGCTGAGGCTGCAAGGTATAAATATATTGAGCAAGAAATTTCTACGCATGTTGATGATAAATTTAAGCCAGATCAAGCGATCATAAGTTTGGAAAACAATTGGGGTGCTCTTTCGAAACAAATCCAAATAGCAGCCAAGGGAAATGGACAGTTCGAAAAACCAGTGGAGCTTATAAACCCCAACAACACACCATTTTCTGTAACCAATGTTTCTTCTCTGGTTGTGACTAGTAATATCAAACTACTGCTATATTTCAAACTCGCTGCTGCTAATCACGACGATCAAGATAAAACCGTAGGGAAACCGTTCAACAATGGAGGTGAAAATTTCATTACTGTCTGA

mRNA sequence

ATGCTGTGGGTAAAGGAGGCGACGGTGACGAGCGGTAATGAAATAAGAAGCGGCGGCAGTGTTGAAAGAGGGAGGAAAGGTGCAGCGTGGGTGACGGCGGCGGCGTGGGTGATAGATGACGGTGTGGTGACCGGTGGCGGCAGCACTGCCGAGGGTGATGTTAGCTTCCAATTGTCAGGTGCCAACAAAAAATCCTACACAAATTTCATCAAACAGCTGAGGGATGCTGTTCCAACCACAACAACAGTGTGCAAGATACCTGTGCTGCCCTCTACTGCATCCGGCCCAAAATCGTTTACATTCGTCCATCTCACCAATTATGCAGACCAAACCGTCGTGGTCGCAATAAACATAACGAACGTTTACATTGTGGCATATCACATCGATCATGTATCCTACTTTTTTGACGATGCGTCGCCCGAAGCTTACAAAGTGTTATTCGAAGGTACTGATCGTAAAACGCTTCCATATTCTAGTAATTACGATAAACTTCAGAGTATTGTAGGCAAAAAAAGAGATTTGATCGAGCTAGGACTCCCTGCCTTAAGCAGTGCCATTACCAACTTGGTTTACTACGAGTACAAATCTACTGCGGCCGCACTTCTTGTACTCATCCAGTCGGTTGCTGAGGCTGCAAGGTATAAATATATTGAGCAAGAAATTTCTACGCATGTTGATGATAAATTTAAGCCAGATCAAGCGATCATAAGTTTGGAAAACAATTGGGGTGCTCTTTCGAAACAAATCCAAATAGCAGCCAAGGGAAATGGACAGTTCGAAAAACCAGTGGAGCTTATAAACCCCAACAACACACCATTTTCTGTAACCAATGTTTCTTCTCTGGTTGTGACTAGTAATATCAAACTACTGCTATATTTCAAACTCGCTGCTGCTAATCACGACGATCAAGATAAAACCGTAGGGAAACCGTTCAACAATGGAGGTGAAAATTTCATTACTGTCTGA

Coding sequence (CDS)

ATGCTGTGGGTAAAGGAGGCGACGGTGACGAGCGGTAATGAAATAAGAAGCGGCGGCAGTGTTGAAAGAGGGAGGAAAGGTGCAGCGTGGGTGACGGCGGCGGCGTGGGTGATAGATGACGGTGTGGTGACCGGTGGCGGCAGCACTGCCGAGGGTGATGTTAGCTTCCAATTGTCAGGTGCCAACAAAAAATCCTACACAAATTTCATCAAACAGCTGAGGGATGCTGTTCCAACCACAACAACAGTGTGCAAGATACCTGTGCTGCCCTCTACTGCATCCGGCCCAAAATCGTTTACATTCGTCCATCTCACCAATTATGCAGACCAAACCGTCGTGGTCGCAATAAACATAACGAACGTTTACATTGTGGCATATCACATCGATCATGTATCCTACTTTTTTGACGATGCGTCGCCCGAAGCTTACAAAGTGTTATTCGAAGGTACTGATCGTAAAACGCTTCCATATTCTAGTAATTACGATAAACTTCAGAGTATTGTAGGCAAAAAAAGAGATTTGATCGAGCTAGGACTCCCTGCCTTAAGCAGTGCCATTACCAACTTGGTTTACTACGAGTACAAATCTACTGCGGCCGCACTTCTTGTACTCATCCAGTCGGTTGCTGAGGCTGCAAGGTATAAATATATTGAGCAAGAAATTTCTACGCATGTTGATGATAAATTTAAGCCAGATCAAGCGATCATAAGTTTGGAAAACAATTGGGGTGCTCTTTCGAAACAAATCCAAATAGCAGCCAAGGGAAATGGACAGTTCGAAAAACCAGTGGAGCTTATAAACCCCAACAACACACCATTTTCTGTAACCAATGTTTCTTCTCTGGTTGTGACTAGTAATATCAAACTACTGCTATATTTCAAACTCGCTGCTGCTAATCACGACGATCAAGATAAAACCGTAGGGAAACCGTTCAACAATGGAGGTGAAAATTTCATTACTGTCTGA

Protein sequence

MLWVKEATVTSGNEIRSGGSVERGRKGAAWVTAAAWVIDDGVVTGGGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDKFKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIKLLLYFKLAAANHDDQDKTVGKPFNNGGENFITV

Homology

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot
Match: P56626 (Type I ribosome-inactivating protein trichoanguina OS=Trichosanthes anguina OX=50544 GN=TCA PE=1 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 4.2e-93
Identity = 180/282 (63.83%), Postives = 218/282 (77.30%), Query Frame = 0


Query: 46  GGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLT 105
           G  TA GDVSF LS A KKSY++FI QLRDA+PT  TVC IP+LPSTASG + F F +LT
Sbjct: 13  GSPTAIGDVSFDLSTATKKSYSSFITQLRDALPTQGTVCGIPLLPSTASGSQWFRFFNLT 72

Query: 106 NYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQ 165
           NY D+TV VA+N+TNVYIVAY  D VSYFF+D   EA+K++F GT    LPYS NYDKLQ
Sbjct: 73  NYNDETVTVAVNVTNVYIVAYRADAVSYFFEDTPAEAFKLIFAGTKTVKLPYSGNYDKLQ 132

Query: 166 SIVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHV 225
           S+VGK+RD+IELG+PALSSAITN+VYY+Y+STAAALLVLIQ  AEAARYKYIEQ++S+H+
Sbjct: 133 SVVGKQRDMIELGIPALSSAITNMVYYDYQSTAAALLVLIQCTAEAARYKYIEQQVSSHI 192

Query: 226 DDKFKPDQAIISLENNWGALSKQIQIAAK-GNGQFEKPVELINPNNTPFSVTNVSSLVVT 285
              F P+QA+ISLEN WGALSKQIQIA + G+GQFE PVEL NP+ T FSVTN S+ VV 
Sbjct: 193 SSNFYPNQAVISLENKWGALSKQIQIANRTGHGQFENPVELYNPDGTRFSVTNTSAGVVK 252

Query: 286 SNIKLLLYFKLAAANHDDQDKTVGKP-----FNNGGENFITV 322
            NIKLLLY+K +  +  D   T+  P      +N   N++T+
Sbjct: 253 GNIKLLLYYKASVGSEYDIPTTILHPGAMGMLHNQNGNYVTM 294

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot
Match: P33185 (Ribosome-inactivating protein bryodin I OS=Bryonia dioica OX=3652 PE=1 SV=3)

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-69
Identity = 151/261 (57.85%), Postives = 183/261 (70.11%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T EGDVSF+LSGA   SY  FIK LR+A+P    V  IP+L S+ SG   +T +HLTNYA
Sbjct: 20  TVEGDVSFRLSGATTTSYGVFIKNLREALPYERKVYNIPLLRSSISGSGRYTLLHLTNYA 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDAS-PEAYKVLFEGTDRK-TLPYSSNYDKLQS 168
           D+T+ VA+++TNVYI+ Y    VSYFF++AS  EA K +F+   +K TLPYS NY++LQ+
Sbjct: 80  DETISVAVDVTNVYIMGYLAGDVSYFFNEASATEAAKFVFKDAKKKVTLPYSGNYERLQT 139

Query: 169 IVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVD 228
             GK R+ I LGLPAL SAIT L YY   S A+ALLVLIQS AE+ARYK+IEQ+I   VD
Sbjct: 140 AAGKIRENIPLGLPALDSAITTLYYYTASSAASALLVLIQSTAESARYKFIEQQIGKRVD 199

Query: 229 DKFKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSN 288
             F P  A ISLENNW ALSKQIQIA+  NGQFE PV LI+ NN   S+TN S+ VVTSN
Sbjct: 200 KTFLPSLATISLENNWSALSKQIQIASTNNGQFESPVVLIDGNNQRVSITNASARVVTSN 259

Query: 289 IKLLLYFKLAAANHDDQDKTV 308
           I LLL     AA  +D   T+
Sbjct: 260 IALLLNRNNIAAIGEDISMTL 280

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot
Match: P09989 (Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 257.3 bits (656), Expect = 2.3e-67
Identity = 146/258 (56.59%), Postives = 177/258 (68.60%), Query Frame = 0


Query: 51  EGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYADQ 110
           EGDVSF+LSGA   SY  FI  LR A+P    +  IP+L S+  G + +  +HLTNYAD+
Sbjct: 22  EGDVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLLRSSLPGSQRYALIHLTNYADE 81

Query: 111 TVVVAINITNVYIVAYHIDHVSYFFDDAS-PEAYKVLFEGTDRK-TLPYSSNYDKLQSIV 170
           T+ VAI++TNVYI+ Y     SYFF++AS  EA K +F+   RK TLPYS NY++LQ+  
Sbjct: 82  TISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFKDAMRKVTLPYSGNYERLQTAA 141

Query: 171 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 230
           GK R+ I LGLPAL SAIT L YY   S A+AL+VLIQS +EAARYK+IEQ+I   VD  
Sbjct: 142 GKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQSTSEAARYKFIEQQIGKRVDKT 201

Query: 231 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 290
           F P  AIISLEN+W ALSKQIQIA+  NGQFE PV LIN  N   ++TNV + VVTSNI 
Sbjct: 202 FLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGVVTSNIA 261

Query: 291 LLLYFKLAAANHDDQDKT 307
           LLL     AA  DD   T
Sbjct: 262 LLLNRNNMAAMDDDVPMT 279

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot
Match: P24478 (Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 6.7e-67
Identity = 145/254 (57.09%), Postives = 175/254 (68.90%), Query Frame = 0


Query: 51  EGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYADQ 110
           EGDVSF+LSGA   SY  FI  LR A+P    +  IP+L ST  G + +  +HLTNYAD+
Sbjct: 22  EGDVSFRLSGATSSSYGVFISNLRKALPYERKLYDIPLLRSTLPGSQRYALIHLTNYADE 81

Query: 111 TVVVAINITNVYIVAYHIDHVSYFFDDAS-PEAYKVLFEGTDRK-TLPYSSNYDKLQSIV 170
           T+ VAI++TNVY++ Y     SYFF++AS  EA K +F+   RK TLPYS NY++LQ   
Sbjct: 82  TISVAIDVTNVYVMGYRAGDTSYFFNEASATEAAKYVFKDAKRKVTLPYSGNYERLQIAA 141

Query: 171 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 230
           GK R+ I LGLPAL SAIT L YY   S A+AL+VLIQS +EAARYK+IEQ+I   VD  
Sbjct: 142 GKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQSTSEAARYKFIEQQIGKRVDKT 201

Query: 231 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 290
           F P  AIISLEN+W ALSKQIQIA+  NGQFE PV LIN  N   ++TNV + VVTSNI 
Sbjct: 202 FLPSLAIISLENSWSALSKQIQIASTNNGQFETPVVLINAQNQRVTITNVDAGVVTSNIA 261

Query: 291 LLLYFKLAAANHDD 303
           LLL     AA  DD
Sbjct: 262 LLLNRNNMAAIDDD 275

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot
Match: P24817 (Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN=MAP30 PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-65
Identity = 136/256 (53.12%), Postives = 178/256 (69.53%), Query Frame = 0


Query: 46  GGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLT 105
           G  TA+GDV+F LS A  K+YT FI+  R  +P +  V  IP+L ST S  + F  ++LT
Sbjct: 17  GVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLLYSTISDSRRFILLNLT 76

Query: 106 NYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQ 165
           +YA +T+ VAI++TNVY+VAY    VSYFF ++ PEAY +LF+GT + TLPY+ NY+ LQ
Sbjct: 77  SYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKGTRKITLPYTGNYENLQ 136

Query: 166 SIVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHV 225
           +   K R+ I+LGLPALSSAIT L YY  +S  +ALLVLIQ+ AEAAR+KYIE+ ++ +V
Sbjct: 137 TAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTAEAARFKYIERHVAKYV 196

Query: 226 DDKFKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTS 285
              FKP+ AIISLEN W ALSKQI +A    G+F  PV+LI P    F VTNV S VV  
Sbjct: 197 ATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPTGERFQVTNVDSDVVKG 256

Query: 286 NIKLLLYFKLAAANHD 302
           NIKLLL  + + A+ +
Sbjct: 257 NIKLLLNSRASTADEN 272

[Close]

BLAST of MC07g_new0083.1 vs. NCBI nr
Match: XP_022156715.1 (type I ribosome-inactivating protein trichoanguina-like [Momordica charantia])

HSP 1 Score: 527 bits (1358), Expect = 2.30e-187
Identity = 272/273 (99.63%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           +AEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA
Sbjct: 19  SAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 78

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
           DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV
Sbjct: 79  DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 138

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK
Sbjct: 139 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 198

Query: 229 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 288
           FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK
Sbjct: 199 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 258

Query: 289 LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV 321
           LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV
Sbjct: 259 LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV 291

[Close]

BLAST of MC07g_new0083.1 vs. NCBI nr
Match: P56626.2 (RecName: Full=Type I ribosome-inactivating protein trichoanguina; Short=RIP; AltName: Full=Trichoanguin; AltName: Full=rRNA N-glycosidase; Flags: Precursor [Trichosanthes anguina] >AAD02686.1 trichoanguin [Trichosanthes cucumerina])

HSP 1 Score: 339 bits (869), Expect = 6.18e-113
Identity = 180/282 (63.83%), Postives = 218/282 (77.30%), Query Frame = 0


Query: 46  GGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLT 105
           G  TA GDVSF LS A KKSY++FI QLRDA+PT  TVC IP+LPSTASG + F F +LT
Sbjct: 13  GSPTAIGDVSFDLSTATKKSYSSFITQLRDALPTQGTVCGIPLLPSTASGSQWFRFFNLT 72

Query: 106 NYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQ 165
           NY D+TV VA+N+TNVYIVAY  D VSYFF+D   EA+K++F GT    LPYS NYDKLQ
Sbjct: 73  NYNDETVTVAVNVTNVYIVAYRADAVSYFFEDTPAEAFKLIFAGTKTVKLPYSGNYDKLQ 132

Query: 166 SIVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHV 225
           S+VGK+RD+IELG+PALSSAITN+VYY+Y+STAAALLVLIQ  AEAARYKYIEQ++S+H+
Sbjct: 133 SVVGKQRDMIELGIPALSSAITNMVYYDYQSTAAALLVLIQCTAEAARYKYIEQQVSSHI 192

Query: 226 DDKFKPDQAIISLENNWGALSKQIQIAAK-GNGQFEKPVELINPNNTPFSVTNVSSLVVT 285
              F P+QA+ISLEN WGALSKQIQIA + G+GQFE PVEL NP+ T FSVTN S+ VV 
Sbjct: 193 SSNFYPNQAVISLENKWGALSKQIQIANRTGHGQFENPVELYNPDGTRFSVTNTSAGVVK 252

Query: 286 SNIKLLLYFKLAAANHDDQDKTVGKP-----FNNGGENFITV 321
            NIKLLLY+K +  +  D   T+  P      +N   N++T+
Sbjct: 253 GNIKLLLYYKASVGSEYDIPTTILHPGAMGMLHNQNGNYVTM 294

[Close]

BLAST of MC07g_new0083.1 vs. NCBI nr
Match: XP_023005055.1 (type I ribosome-inactivating protein trichoanguina-like [Cucurbita maxima])

HSP 1 Score: 318 bits (816), Expect = 6.32e-105
Identity = 167/255 (65.49%), Postives = 205/255 (80.39%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T + D++F LS A K SY+ FI QLR+A+PTT TVC IP+LPSTASG   FTF  +TNY 
Sbjct: 20  TLKADITFDLSTATKASYSAFITQLRNALPTTATVCNIPLLPSTASGLGWFTFFTITNYN 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
            QT+ VA+N+TNVYIVAY  D  SYFF+D   EA ++LF  T + TLP++ NYDKLQSIV
Sbjct: 80  YQTITVAVNVTNVYIVAYRADASSYFFEDTPAEAKQLLFPNTQKVTLPFTGNYDKLQSIV 139

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GK RDLIELG+PALS+A+TN+VYY  + TAAALLVLIQS AEAAR+KYIEQ+++ H+ DK
Sbjct: 140 GKYRDLIELGIPALSTAVTNMVYYNKQLTAAALLVLIQSSAEAARFKYIEQQVAQHISDK 199

Query: 229 FKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNI 288
           F P+QA+ISLENNWGALSKQIQIA + G GQF+ PVELI+PN T FSVT+ S+ VV SNI
Sbjct: 200 FYPNQAVISLENNWGALSKQIQIANSTGRGQFQSPVELISPNGTRFSVTSTSAGVVQSNI 259

Query: 289 KLLLYFKLAAANHDD 302
           KLLLY+KL+ A+ +D
Sbjct: 260 KLLLYYKLSVADEND 274

[Close]

BLAST of MC07g_new0083.1 vs. NCBI nr
Match: XP_022156709.1 (type I ribosome-inactivating protein trichoanguina-like [Momordica charantia])

HSP 1 Score: 310 bits (794), Expect = 1.08e-101
Identity = 172/256 (67.19%), Postives = 198/256 (77.34%), Query Frame = 0


Query: 46  GGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLT 105
           G  TA+GDVSF LS A K SYT+FI+ LR A+PT  TVC IPVLPSTASG + F F  LT
Sbjct: 17  GPPTAKGDVSFDLSTATKNSYTSFIRDLRSALPTRGTVCNIPVLPSTASGLQWFRFFSLT 76

Query: 106 NYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQ 165
           NY  QT+ VA+N+TNVYI AY    VSYFF+D S EA+++LF GT + TLPYS NYD+LQ
Sbjct: 77  NYNYQTITVAVNVTNVYIAAYSTGAVSYFFEDTSAEAFRLLFVGTQKVTLPYSGNYDRLQ 136

Query: 166 SIVGKKRDLIELGLPALSSAITNLVYYE-YKSTAAALLVLIQSVAEAARYKYIEQEISTH 225
           SIVGK RDLIELG+P LS+AITNL Y   YK TA ALLVLIQS AEAAR+KYIEQE+S H
Sbjct: 137 SIVGKNRDLIELGIPTLSNAITNLFYNNNYKLTATALLVLIQSTAEAARFKYIEQEVSKH 196

Query: 226 VDDKFKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVV 285
           V   F P+QAIISLEN+WGALSKQIQIA +KG GQF+K VELI  +    SVTN S+ VV
Sbjct: 197 VSSNFFPNQAIISLENSWGALSKQIQIANSKGTGQFDKAVELITIDGKRVSVTNTSTGVV 256

Query: 286 TSNIKLLLYFKLAAAN 299
            SNIKLLLY+K+  AN
Sbjct: 257 KSNIKLLLYYKVNGAN 272

[Close]

BLAST of MC07g_new0083.1 vs. NCBI nr
Match: KAG6592904.1 (Type I ribosome-inactivating protein trichoanguina, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025309.1 Type I ribosome-inactivating protein trichoanguina, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308 bits (789), Expect = 7.82e-101
Identity = 164/265 (61.89%), Postives = 205/265 (77.36%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T + D++F LS A K SY+ FI QLR+A+PT  TVC IP+LPSTA+G   FTF  +TNY 
Sbjct: 20  TLKADIAFDLSTATKASYSAFITQLRNALPTKATVCNIPLLPSTATGLGWFTFFTITNYN 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
            QTV VA+N++NVYIVAY  D  SYFF+D   +A ++LF GT + TLP++ NYDKLQSIV
Sbjct: 80  YQTVEVAVNVSNVYIVAYRADANSYFFEDTPAQAKQLLFAGTQKVTLPFTGNYDKLQSIV 139

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GK RD++ELG+PALS+A+TN+VYY  + TAAALLVLIQS AEAAR+KYIEQ+++ ++  K
Sbjct: 140 GKYRDMVELGIPALSTAVTNMVYYNKQPTAAALLVLIQSTAEAARFKYIEQQVAQYISGK 199

Query: 229 FKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNI 288
           F P+QA+ISLENNWGALSKQIQIA + G+GQF+ PVELI+PN T F VT+ SS VV  NI
Sbjct: 200 FYPNQAVISLENNWGALSKQIQIANSTGSGQFQSPVELISPNGTRFRVTSTSSGVVQGNI 259

Query: 289 KLLLYFKLAAANHDDQDKTVGKPFN 312
           KLLLY+KL+ A  DD D     P N
Sbjct: 260 KLLLYYKLSVA--DDNDSPTRMPDN 282

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL
Match: A0A6J1DR40 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023561 PE=3 SV=1)

HSP 1 Score: 527 bits (1358), Expect = 1.11e-187
Identity = 272/273 (99.63%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           +AEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA
Sbjct: 19  SAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 78

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
           DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV
Sbjct: 79  DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 138

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK
Sbjct: 139 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 198

Query: 229 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 288
           FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK
Sbjct: 199 FKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNIK 258

Query: 289 LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV 321
           LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV
Sbjct: 259 LLLYFKLAAANHDDQDKTVGKPFNNGGENFITV 291

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL
Match: A0A6J1KWC4 (rRNA N-glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111498162 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 3.06e-105
Identity = 167/255 (65.49%), Postives = 205/255 (80.39%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T + D++F LS A K SY+ FI QLR+A+PTT TVC IP+LPSTASG   FTF  +TNY 
Sbjct: 20  TLKADITFDLSTATKASYSAFITQLRNALPTTATVCNIPLLPSTASGLGWFTFFTITNYN 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
            QT+ VA+N+TNVYIVAY  D  SYFF+D   EA ++LF  T + TLP++ NYDKLQSIV
Sbjct: 80  YQTITVAVNVTNVYIVAYRADASSYFFEDTPAEAKQLLFPNTQKVTLPFTGNYDKLQSIV 139

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GK RDLIELG+PALS+A+TN+VYY  + TAAALLVLIQS AEAAR+KYIEQ+++ H+ DK
Sbjct: 140 GKYRDLIELGIPALSTAVTNMVYYNKQLTAAALLVLIQSSAEAARFKYIEQQVAQHISDK 199

Query: 229 FKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNI 288
           F P+QA+ISLENNWGALSKQIQIA + G GQF+ PVELI+PN T FSVT+ S+ VV SNI
Sbjct: 200 FYPNQAVISLENNWGALSKQIQIANSTGRGQFQSPVELISPNGTRFSVTSTSAGVVQSNI 259

Query: 289 KLLLYFKLAAANHDD 302
           KLLLY+KL+ A+ +D
Sbjct: 260 KLLLYYKLSVADEND 274

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL
Match: A0A6J1DUC7 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023554 PE=3 SV=1)

HSP 1 Score: 310 bits (794), Expect = 5.23e-102
Identity = 172/256 (67.19%), Postives = 198/256 (77.34%), Query Frame = 0


Query: 46  GGSTAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLT 105
           G  TA+GDVSF LS A K SYT+FI+ LR A+PT  TVC IPVLPSTASG + F F  LT
Sbjct: 17  GPPTAKGDVSFDLSTATKNSYTSFIRDLRSALPTRGTVCNIPVLPSTASGLQWFRFFSLT 76

Query: 106 NYADQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQ 165
           NY  QT+ VA+N+TNVYI AY    VSYFF+D S EA+++LF GT + TLPYS NYD+LQ
Sbjct: 77  NYNYQTITVAVNVTNVYIAAYSTGAVSYFFEDTSAEAFRLLFVGTQKVTLPYSGNYDRLQ 136

Query: 166 SIVGKKRDLIELGLPALSSAITNLVYYE-YKSTAAALLVLIQSVAEAARYKYIEQEISTH 225
           SIVGK RDLIELG+P LS+AITNL Y   YK TA ALLVLIQS AEAAR+KYIEQE+S H
Sbjct: 137 SIVGKNRDLIELGIPTLSNAITNLFYNNNYKLTATALLVLIQSTAEAARFKYIEQEVSKH 196

Query: 226 VDDKFKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVV 285
           V   F P+QAIISLEN+WGALSKQIQIA +KG GQF+K VELI  +    SVTN S+ VV
Sbjct: 197 VSSNFFPNQAIISLENSWGALSKQIQIANSKGTGQFDKAVELITIDGKRVSVTNTSTGVV 256

Query: 286 TSNIKLLLYFKLAAAN 299
            SNIKLLLY+K+  AN
Sbjct: 257 KSNIKLLLYYKVNGAN 272

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL
Match: A0A6J1H951 (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111461188 PE=3 SV=1)

HSP 1 Score: 300 bits (769), Expect = 4.06e-98
Identity = 159/265 (60.00%), Postives = 204/265 (76.98%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T + D++  LS A K +Y+ FI QLR+A+PT  TVC IP+LPSTA+G  SFTF  +TNY 
Sbjct: 20  TLKADIALDLSTATKATYSAFITQLRNALPTKATVCNIPLLPSTATGLGSFTFFTITNYN 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASPEAYKVLFEGTDRKTLPYSSNYDKLQSIV 168
            +TV VA+N++NVYIVAY  +  SYFF+D S +A ++LF+ T + TLP++ NYD+LQ +V
Sbjct: 80  YETVEVAVNVSNVYIVAYRANAKSYFFEDTSAQARQLLFQNTQKITLPFTGNYDRLQGVV 139

Query: 169 GKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVDDK 228
           GK RD IELG+PALS+A+TN+VYY  + TAAALLVLIQS AEAAR+KYIEQ+++ ++  K
Sbjct: 140 GKYRDSIELGIPALSTAVTNMVYYNKQLTAAALLVLIQSTAEAARFKYIEQQVAQYISGK 199

Query: 229 FKPDQAIISLENNWGALSKQIQIA-AKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSNI 288
           F P+QA+ISLENNWGALSKQIQIA + G+GQF+ PVELI+PN T F VT+ SS VV  NI
Sbjct: 200 FYPNQAVISLENNWGALSKQIQIANSTGSGQFQSPVELISPNGTRFRVTSTSSGVVQGNI 259

Query: 289 KLLLYFKLAAANHDDQDKTVGKPFN 312
           KLLLY+KL+ A  DD D     P N
Sbjct: 260 KLLLYYKLSVA--DDNDSPTRMPDN 282

[Close]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL
Match: Q53X19 (rRNA N-glycosidase OS=Bryonia dioica OX=3652 PE=2 SV=1)

HSP 1 Score: 260 bits (664), Expect = 2.91e-82
Identity = 151/261 (57.85%), Postives = 183/261 (70.11%), Query Frame = 0


Query: 49  TAEGDVSFQLSGANKKSYTNFIKQLRDAVPTTTTVCKIPVLPSTASGPKSFTFVHLTNYA 108
           T EGDVSF+LSGA   SY  FIK LR+A+P    V  IP+L S+ SG   +T +HLTNYA
Sbjct: 20  TVEGDVSFRLSGATTTSYGVFIKNLREALPYERKVYNIPLLRSSISGSGRYTLLHLTNYA 79

Query: 109 DQTVVVAINITNVYIVAYHIDHVSYFFDDASP-EAYKVLFEGTDRK-TLPYSSNYDKLQS 168
           D+T+ VA+++TNVYI+ Y    VSYFF++AS  EA K +F+   +K TLPYS NY++LQ+
Sbjct: 80  DETISVAVDVTNVYIMGYLAGDVSYFFNEASATEAAKFVFKDAKKKVTLPYSGNYERLQT 139

Query: 169 IVGKKRDLIELGLPALSSAITNLVYYEYKSTAAALLVLIQSVAEAARYKYIEQEISTHVD 228
             GK R+ I LGLPAL SAIT L YY   S A+ALLVLIQS AE+ARYK+IEQ+I   VD
Sbjct: 140 AAGKIRENIPLGLPALDSAITTLYYYTASSAASALLVLIQSTAESARYKFIEQQIGKRVD 199

Query: 229 DKFKPDQAIISLENNWGALSKQIQIAAKGNGQFEKPVELINPNNTPFSVTNVSSLVVTSN 288
             F P  A ISLENNW ALSKQIQIA+  NGQFE PV LI+ NN   S+TN S+ VVTSN
Sbjct: 200 KTFLPSLATISLENNWSALSKQIQIASTNNGQFESPVVLIDGNNQRVSITNASARVVTSN 259

Query: 289 IKLLLYFKLAAANHDDQDKTV 307
           I LLL     AA  +D   T+
Sbjct: 260 IALLLNRNNIAAIGEDISMTL 280

The following BLAST results are available for this feature:

BLAST of MC07g_new0083.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P56626	4.2e-93	63.83	Type I ribosome-inactivating protein trichoanguina OS=Trichosanthes anguina OX=5...	[more]
P33185	1.9e-69	57.85	Ribosome-inactivating protein bryodin I OS=Bryonia dioica OX=3652 PE=1 SV=3	[more]
P09989	2.3e-67	56.59	Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=...	[more]
P24478	6.7e-67	57.09	Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=...	[more]
P24817	2.8e-65	53.13	Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN...	[more]

BLAST of MC07g_new0083.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156715.1	2.30e-187	99.63	type I ribosome-inactivating protein trichoanguina-like [Momordica charantia]	[more]
P56626.2	6.18e-113	63.83	RecName: Full=Type I ribosome-inactivating protein trichoanguina; Short=RIP; Alt...	[more]
XP_023005055.1	6.32e-105	65.49	type I ribosome-inactivating protein trichoanguina-like [Cucurbita maxima]	[more]
XP_022156709.1	1.08e-101	67.19	type I ribosome-inactivating protein trichoanguina-like [Momordica charantia]	[more]
KAG6592904.1	7.82e-101	61.89	Type I ribosome-inactivating protein trichoanguina, partial [Cucurbita argyrospe...	[more]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR40	1.11e-187	99.63	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023561 PE=3 SV=1	[more]
A0A6J1KWC4	3.06e-105	65.49	rRNA N-glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111498162 PE=3 SV=1	[more]
A0A6J1DUC7	5.23e-102	67.19	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023554 PE=3 SV=1	[more]
A0A6J1H951	4.06e-98	60.00	rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111461188 PE=3 SV=1	[more]
Q53X19	2.91e-82	57.85	rRNA N-glycosidase OS=Bryonia dioica OX=3652 PE=2 SV=1	[more]

BLAST of MC07g_new0083.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017989	Ribosome-inactivating protein type 1/2	PRINTS	PR00396	SHIGARICIN	coord: 64..77 score: 42.48 coord: 233..250 score: 52.19 coord: 201..221 score: 62.91 coord: 111..126 score: 44.9 coord: 172..186 score: 50.7
IPR001574	Ribosome-inactivating protein	PFAM	PF00161	RIP	coord: 62..250 e-value: 1.4E-33 score: 116.2
IPR001574	Ribosome-inactivating protein	PANTHER	PTHR33453	FAMILY NOT NAMED	coord: 53..291
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	3.40.420.10	Ricin (A subunit), domain 1	coord: 53..212 e-value: 2.8E-43 score: 149.4
IPR016139	Ribosome-inactivating protein, subdomain 2	GENE3D	4.10.470.10	Ricin (A Subunit), domain 2	coord: 213..295 e-value: 2.6E-30 score: 106.2
None	No IPR available	PANTHER	PTHR33453:SF14	RRNA N-GLYCOSIDASE	coord: 53..291
IPR017988	Ribosome-inactivating protein conserved site	PROSITE	PS00275	SHIGA_RICIN	coord: 205..221
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	56371	Ribosome inactivating proteins (RIP)	coord: 53..294

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC07g_new0083	MC07g_new0083	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC07g_new0083.1-cds	MC07g_new0083.1-cds-MC07:2959014..2959831	CDS
MC07g_new0083.1-cds	MC07g_new0083.1-cds-MC07:2961465..2961612	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC07g_new0083.1	MC07g_new0083.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006952	defense response
biological_process	GO:0035821	modulation of process of other organism
molecular_function	GO:0030598	rRNA N-glycosylase activity
molecular_function	GO:0090729	toxin activity