MC07g0800.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0800.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-H2 finger protein ATL2-like
Location	MC07: 15605993 .. 15606751 (+)
Sequence length	759
RNA-Seq Expression	MC07g0800.1
Synteny	MC07g0800.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTCCGTCGTACAAACGCTACGCTCTCAGCGGCAAAATTATGCTCGGCGCAATTATTGTACTGTTGTTTGTCGTTATCCTCATGATTTGTCTCCACCTCTACGTCCGATTATACCTCCTCTCCTCCAACCGCCGGCAAGCCCCCCGCCGCCGCCGCCACCGCCGCGCGCACTTTGTATTTACCGCTGAGCCCCGACACGCCGCCGCCGCCGCCGCTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCAGCGAAGCCCGACCCGGATCCGATTTGTTGCGCGGTTTGCTTGTCGGAGTTTGAAGAGAACGAAATCGGGCGTATTATCCCCAAATGTAAACACAGTTTTCACGTGGGCTGTATAGATATGTGGTTTTATTCGCACGTGACCTGCCCGCTTTGTAGATCCGAAGTGCAACCGGAAACCGGGTCGGATAATCCGCCCGACGTATCCGTATCTATTCATGACCCGGATATACCCGAACCGGGTCCGAGTTCTGGATCTACCAGAAGCGGAGAAGAACCGGGTTGTCCTTCTCCGTCTGAGTTGCCGTCATTGGTGGAGCTGGTGGTAGCGTCGTCCGAGGAGTCGATATCTGAGGAAGGACTACGGCAAATTGACGACATGTCGGTTCACGGCACCTCTAGGACAACGGCGAATTTCGTGAAGTCGTTGTCGTTCAAGAGAATCCTCTGTAGGGATAAACGGGACGGAGTTTCTCCGTCGGAAAAC

mRNA sequence

TCTCCTCCGTCGTACAAACGCTACGCTCTCAGCGGCAAAATTATGCTCGGCGCAATTATTGTACTGTTGTTTGTCGTTATCCTCATGATTTGTCTCCACCTCTACGTCCGATTATACCTCCTCTCCTCCAACCGCCGGCAAGCCCCCCGCCGCCGCCGCCACCGCCGCGCGCACTTTGTATTTACCGCTGAGCCCCGACACGCCGCCGCCGCCGCCGCTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCAGCGAAGCCCGACCCGGATCCGATTTGTTGCGCGGTTTGCTTGTCGGAGTTTGAAGAGAACGAAATCGGGCGTATTATCCCCAAATGTAAACACAGTTTTCACGTGGGCTGTATAGATATGTGGTTTTATTCGCACGTGACCTGCCCGCTTTGTAGATCCGAAGTGCAACCGGAAACCGGGTCGGATAATCCGCCCGACGTATCCGTATCTATTCATGACCCGGATATACCCGAACCGGGTCCGAGTTCTGGATCTACCAGAAGCGGAGAAGAACCGGGTTGTCCTTCTCCGTCTGAGTTGCCGTCATTGGTGGAGCTGGTGGTAGCGTCGTCCGAGGAGTCGATATCTGAGGAAGGACTACGGCAAATTGACGACATGTCGGTTCACGGCACCTCTAGGACAACGGCGAATTTCGTGAAGTCGTTGTCGTTCAAGAGAATCCTCTGTAGGGATAAACGGGACGGAGTTTCTCCGTCGGAAAAC

Coding sequence (CDS)

TCTCCTCCGTCGTACAAACGCTACGCTCTCAGCGGCAAAATTATGCTCGGCGCAATTATTGTACTGTTGTTTGTCGTTATCCTCATGATTTGTCTCCACCTCTACGTCCGATTATACCTCCTCTCCTCCAACCGCCGGCAAGCCCCCCGCCGCCGCCGCCACCGCCGCGCGCACTTTGTATTTACCGCTGAGCCCCGACACGCCGCCGCCGCCGCCGCTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCAGCGAAGCCCGACCCGGATCCGATTTGTTGCGCGGTTTGCTTGTCGGAGTTTGAAGAGAACGAAATCGGGCGTATTATCCCCAAATGTAAACACAGTTTTCACGTGGGCTGTATAGATATGTGGTTTTATTCGCACGTGACCTGCCCGCTTTGTAGATCCGAAGTGCAACCGGAAACCGGGTCGGATAATCCGCCCGACGTATCCGTATCTATTCATGACCCGGATATACCCGAACCGGGTCCGAGTTCTGGATCTACCAGAAGCGGAGAAGAACCGGGTTGTCCTTCTCCGTCTGAGTTGCCGTCATTGGTGGAGCTGGTGGTAGCGTCGTCCGAGGAGTCGATATCTGAGGAAGGACTACGGCAAATTGACGACATGTCGGTTCACGGCACCTCTAGGACAACGGCGAATTTCGTGAAGTCGTTGTCGTTCAAGAGAATCCTCTGTAGGGATAAACGGGACGGAGTTTCTCCGTCGGAAAAC

Protein sequence

SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRILCRDKRDGVSPSEN

Homology

[Close]

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 5.7e-45
Identity = 115/255 (45.10%), Postives = 151/255 (59.22%), Query Frame = 0


Query: 6   KRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV-FTAE 65
           K YA+SGKIML AI++L FVVILM+ LHLY R YLL + RR   RR R+RRA  V FTA+
Sbjct: 22  KTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTAD 81

Query: 66  PRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKCKHS 125
           P  AA +   SRGL  +++KSLPVF  S +   DPI CAVCLSEFEE+E GR++P C+H+
Sbjct: 82  PSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHT 141

Query: 126 FHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPP-----DVSVSIHDPDIPEPGPSSGSTR 185
           FHV CIDMWF+SH TCPLCRS V+   G ++       +V +++    +    PSS S  
Sbjct: 142 FHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGL 201

Query: 186 SGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANF----VKSLS 245
           + E  G  S   L        A+ E  +      + +D      S  + +F     + LS
Sbjct: 202 TDEPHGSGSSQMLREDSGRKPAAIE--VPRRTFSEFEDELTRRDSPASQSFRSPMSRMLS 261

Query: 246 FKRILCRDKRDGVSP 251
           F R+L RD+R   SP
Sbjct: 262 FTRMLSRDRRSASSP 274

[Close]

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-29
Identity = 76/156 (48.72%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 8   YALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPRH 67
           YAL+GKIML ++IVL   VI+++C H Y R      NRR   R R H R     +A PR 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLR---TLSASPRD 81

Query: 68  AAAAAAPSRGLPQSILKSLPVFVHSAKPDPDP---ICCAVCLSEFEENEIGRIIPKCKHS 127
            A        L Q++L  +P+FV+S+K  P P     C+VCLSEFEE + GR++PKC HS
Sbjct: 82  QA--------LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHS 141

Query: 128 FHVGCIDMWFYSHVTCPLCRSEVQP-----ETGSDN 156
           FHV CID WF S  TCPLCR+ VQP     ETGS +
Sbjct: 142 FHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

[Close]

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 7   RYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPR 66
           RY+L+GKIML ++I+L   VIL++C H Y R       RRQ  R RR   AH    A  R
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAAR 80

Query: 67  HAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPI-CCAVCLSEFEENEIGRIIPKCKHSF 126
               +++    L  ++L+ +P+FV+S K    P+  C+VCLSEFEE++ GR++PKC H F
Sbjct: 81  DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVF 140

Query: 127 HVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSV---SIHDPDIPEPGPSSGSTRSGE 186
           HV CID WF S  +CPLCR+ VQP      P  V+    S+   +  E G SS S  S  
Sbjct: 141 HVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDES-- 200

Query: 187 EPGCPSPS 191
           E   PS S
Sbjct: 201 ESSTPSSS 202

[Close]

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 15  MLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPRHAAAAAAP 74
           ML   I++L +VILM+ LHLY R YLL    R +P  R    A   F  +P      ++ 
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLL----RSSPFNR--TTAASTFFTDP------SST 60

Query: 75  SRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKCKHSFHVGCIDMWF 134
             GL  SI+KSLP+F  SA      + C+VCLSEF++NE GR++P CKH+FHV CIDMWF
Sbjct: 61  PGGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWF 120

Query: 135 YSHVTCPLCRSEVQPETG--SDNPPDVSVSIHDPDIPEPGPSSGSTRSGEEPGCPSPSE- 194
           +SH +CPLCRS+++P  G    +  +V++SI DP   +     G+  +G+    P  S+ 
Sbjct: 121 HSHSSCPLCRSQIEPFAGGVKSSMDEVAISISDPVYGDTNHHEGTETTGD--SVPEDSQR 173

Query: 195 LPSLVEL 199
            P+ +E+
Sbjct: 181 KPAAIEI 173

[Close]

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-18
Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 12  GKIMLGAIIVLLFVVILMICLHLYVRLY------------LLSSNRRQAPRRRRHRRAHF 71
           GK++L +I+ +   ++ ++ LHLY RL+            + S +       R  RR  F
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRF 81

Query: 72  VFT---AEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGR 131
           VF     +P H A       GL   IL+S+ V V       D + CAVCLS+  + +  R
Sbjct: 82  VFAQSQEDPLHNA-------GLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKAR 141

Query: 132 IIPKCKHSFHVGCIDMWFYSHVTCPLCRSEV 148
           ++P+C H FHV CIDMWF SH TCPLCR+ V
Sbjct: 142 VLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165

[Close]

BLAST of MC07g0800.1 vs. NCBI nr
Match: XP_022138684.1 (RING-H2 finger protein ATL2-like [Momordica charantia])

HSP 1 Score: 502 bits (1292), Expect = 1.23e-178
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV 60
           SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV
Sbjct: 11  SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV 70

Query: 61  FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK 120
           FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK
Sbjct: 71  FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK 130

Query: 121 CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS 180
           CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS
Sbjct: 131 CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS 190

Query: 181 GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL 240
           GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL
Sbjct: 191 GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL 250

Query: 241 CRDKRDGVSPSEN 253
           CRDKRDGVSPSEN
Sbjct: 251 CRDKRDGVSPSEN 263

[Close]

BLAST of MC07g0800.1 vs. NCBI nr
Match: XP_038875154.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 299 bits (765), Expect = 5.49e-99
Identity = 175/242 (72.31%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRR--RRHRRAH 60
           SPPSYKRYA SGKIMLGAII+LLFVVILMICLHLYVRLYLLSS+RRQ+  R  RR RR H
Sbjct: 12  SPPSYKRYAFSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQSHSRIRRRRRREH 71

Query: 61  FVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRII 120
           FVFTAEPR    AAAPS GLPQSILKSLPVFVHS KPDPDPI CAVCLSEFEENEIGRII
Sbjct: 72  FVFTAEPR---IAAAPSHGLPQSILKSLPVFVHSGKPDPDPIYCAVCLSEFEENEIGRII 131

Query: 121 PKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPP---DVSVSIHDPDIPEPGPSS 180
           PKC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS + P    V ++I   DI EPG SS
Sbjct: 132 PKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFDDPVEIAI---DISEPGSSS 191

Query: 181 GSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLS 237
           G     EEP    P E+ + VELV   S         RQ+ DMS  GTSR TANFVKSLS
Sbjct: 192 GE----EEPDRWCPVEMAASVELVDNES---------RQVVDMSDDGTSRITANFVKSLS 234

[Close]

BLAST of MC07g0800.1 vs. NCBI nr
Match: XP_008458410.1 (PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 2.29e-93
Identity = 164/243 (67.49%), Postives = 182/243 (74.90%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPR---RRRHRRA 60
           SPPSY+RYALSGKIMLGAII+LLFVVILMICLHLYVRL+LLSS+  +  R   RRR RR 
Sbjct: 12  SPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPSRSRIRRRRRRE 71

Query: 61  HFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRI 120
           HFVFTAEPR  AAA APSRGLPQSILKSLPVFVH AK DPDPI CAVCLSEFEENEIGR 
Sbjct: 72  HFVFTAEPR-IAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLSEFEENEIGRS 131

Query: 121 IPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGS 180
           IPKC H FHVGCIDMWFYSHVTCPLCRSEV+PE G  + P   ++I   D+ E G     
Sbjct: 132 IPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGPCGEIAI---DVSEVG----- 191

Query: 181 TRSGEEP---GCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSL 237
           +RSGEE    GCP          + +A+S E + +E  R ++DMS  GTSR T NFVKSL
Sbjct: 192 SRSGEEERDGGCP----------VEMAASVEVVEDES-RHVNDMSDDGTSRATVNFVKSL 234

[Close]

BLAST of MC07g0800.1 vs. NCBI nr
Match: XP_004150504.1 (RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein Csa_021711 [Cucumis sativus])

HSP 1 Score: 276 bits (705), Expect = 7.13e-90
Identity = 158/236 (66.95%), Postives = 173/236 (73.31%), Query Frame = 0


Query: 2   PPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVF 61
           PPSY RYALSGKIMLGAII+LLFVVILMICLHLYVRL+LLSS  R +  RRR RR HFVF
Sbjct: 13  PPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVF 72

Query: 62  TAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKC 121
           TAEPR  AAA  PSRGLPQSILKSLPVFVHS K DPDPI CAVCLSEFEENEIGR IPKC
Sbjct: 73  TAEPR-IAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKC 132

Query: 122 KHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRSG 181
            HSFHVGCIDMWFYSH TCPLCRSEV+PE   ++ P         D+ E G     +RSG
Sbjct: 133 NHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCELG-----SRSG 192

Query: 182 EEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFK 237
           EE       E      + +A+S E + +E  R ++DMS  GTSR T NFVKSLS K
Sbjct: 193 EE-------ETDHRCPVEMAASVEVVDDES-RHVNDMSDDGTSRATVNFVKSLSVK 234

[Close]

BLAST of MC07g0800.1 vs. NCBI nr
Match: KAG7013653.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274 bits (700), Expect = 5.17e-89
Identity = 164/251 (65.34%), Postives = 179/251 (71.31%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQA-PRRRRHRRAHF 60
           SP S+K YALSGKIMLGA+IVLLFVVILMICLHLYVRLYLLSS+RRQ+   RRR RR  F
Sbjct: 14  SPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQF 73

Query: 61  VFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIP 120
            F  EPR AAA+   SRGLPQSILKSLPVFVHS KPDPDP+ CAVCLSEFEENEIGR IP
Sbjct: 74  EFPMEPRIAAAS---SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIP 133

Query: 121 KCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTR 180
           KC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS++ P         D+ EP    GS  
Sbjct: 134 KCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP----GSRS 193

Query: 181 SGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMS--VHGTSRTTANFVKSLSFK 240
           S +EP    P E+ + VE+V                DD S  V G S TT +FVKSLS K
Sbjct: 194 SEDEPVRECPVEMAASVEMV----------------DDESRPVAGMSETTTSFVKSLSLK 241

Query: 241 RILCRD--KRD 246
           RIL RD  KRD
Sbjct: 254 RILSRDATKRD 241

[Close]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL
Match: A0A6J1CAT0 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 PE=4 SV=1)

HSP 1 Score: 502 bits (1292), Expect = 5.97e-179
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV 60
           SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV
Sbjct: 11  SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV 70

Query: 61  FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK 120
           FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK
Sbjct: 71  FTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPK 130

Query: 121 CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS 180
           CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS
Sbjct: 131 CKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRS 190

Query: 181 GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL 240
           GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL
Sbjct: 191 GEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKRIL 250

Query: 241 CRDKRDGVSPSEN 253
           CRDKRDGVSPSEN
Sbjct: 251 CRDKRDGVSPSEN 263

[Close]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL
Match: A0A1S3C7X4 (RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.11e-93
Identity = 164/243 (67.49%), Postives = 182/243 (74.90%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPR---RRRHRRA 60
           SPPSY+RYALSGKIMLGAII+LLFVVILMICLHLYVRL+LLSS+  +  R   RRR RR 
Sbjct: 12  SPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPSRSRIRRRRRRE 71

Query: 61  HFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRI 120
           HFVFTAEPR  AAA APSRGLPQSILKSLPVFVH AK DPDPI CAVCLSEFEENEIGR 
Sbjct: 72  HFVFTAEPR-IAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLSEFEENEIGRS 131

Query: 121 IPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGS 180
           IPKC H FHVGCIDMWFYSHVTCPLCRSEV+PE G  + P   ++I   D+ E G     
Sbjct: 132 IPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGPCGEIAI---DVSEVG----- 191

Query: 181 TRSGEEP---GCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSL 237
           +RSGEE    GCP          + +A+S E + +E  R ++DMS  GTSR T NFVKSL
Sbjct: 192 SRSGEEERDGGCP----------VEMAASVEVVEDES-RHVNDMSDDGTSRATVNFVKSL 234

[Close]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL
Match: A0A0A0KF25 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 PE=4 SV=1)

HSP 1 Score: 276 bits (705), Expect = 3.45e-90
Identity = 158/236 (66.95%), Postives = 173/236 (73.31%), Query Frame = 0


Query: 2   PPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVF 61
           PPSY RYALSGKIMLGAII+LLFVVILMICLHLYVRL+LLSS  R +  RRR RR HFVF
Sbjct: 13  PPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVF 72

Query: 62  TAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKC 121
           TAEPR  AAA  PSRGLPQSILKSLPVFVHS K DPDPI CAVCLSEFEENEIGR IPKC
Sbjct: 73  TAEPR-IAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKC 132

Query: 122 KHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTRSG 181
            HSFHVGCIDMWFYSH TCPLCRSEV+PE   ++ P         D+ E G     +RSG
Sbjct: 133 NHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCELG-----SRSG 192

Query: 182 EEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFK 237
           EE       E      + +A+S E + +E  R ++DMS  GTSR T NFVKSLS K
Sbjct: 193 EE-------ETDHRCPVEMAASVEVVDDES-RHVNDMSDDGTSRATVNFVKSLSVK 234

[Close]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL
Match: A0A6J1L074 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 1.39e-88
Identity = 160/245 (65.31%), Postives = 179/245 (73.06%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQA-PRRRRHRRAHF 60
           SP S+K YALSGKIMLG +IVLLFVVILMICLHLYVRLYLLSS+RRQ+   RRR RR  F
Sbjct: 13  SPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQF 72

Query: 61  VFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIP 120
            FT EPR AAA+   SRGLP SILK+LPVFVHS KPDPDP+ CAVCLSEFEENEIGR IP
Sbjct: 73  EFTTEPRIAAAS---SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIP 132

Query: 121 KCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDN-PPDVSVSIHDPDIPEPGPSSGST 180
           KC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS++ P D  V I   D+ EP    GS 
Sbjct: 133 KCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIV-LDVCEP----GSR 192

Query: 181 RSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFKR 240
            S +EP    P E+ + VELV         ++  R + D     TS TT +F+KSLS KR
Sbjct: 193 SSEDEPDRECPVEMAASVELV---------DDASRPVAD-----TSETTTSFMKSLSLKR 235

Query: 241 ILCRD 243
           IL RD
Sbjct: 253 ILSRD 235

[Close]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL
Match: A0A6J1H376 (RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 1.44e-88
Identity = 166/251 (66.14%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   SPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQA-PRRRRHRRAHF 60
           SP S+K YALSGKIMLGA+IVLLFVVILMICLHLYVRLYLLSS+RRQ+   RRR RR  F
Sbjct: 14  SPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSHRRRRRRVQF 73

Query: 61  VFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIP 120
            FT EPR AAA+   SRGLPQSILKSLPVFVHS KPDPDP+ CAVCLSEFEENEIGR IP
Sbjct: 74  EFTTEPRIAAAS---SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEENEIGRTIP 133

Query: 121 KCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIPEPGPSSGSTR 180
           KC HSFHVGCIDMWFYSHVTCPLCRSEV+PE GS++ P         D+ EP    GS  
Sbjct: 134 KCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP----GSRS 193

Query: 181 SGEEP--GCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANFVKSLSFK 240
           S +EP   C        LVE+  A+S E + +E  R   DMS      TT +FVKSLS K
Sbjct: 194 SEDEPVREC--------LVEM--AASVELVDDES-RPAADMS-----ETTTSFVKSLSLK 241

Query: 241 RILCRD--KRD 246
           RIL RD  KRD
Sbjct: 254 RILSRDATKRD 241

[Close]

BLAST of MC07g0800.1 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 182.6 bits (462), Expect = 4.0e-46
Identity = 115/255 (45.10%), Postives = 151/255 (59.22%), Query Frame = 0


Query: 6   KRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFV-FTAE 65
           K YA+SGKIML AI++L FVVILM+ LHLY R YLL + RR   RR R+RRA  V FTA+
Sbjct: 22  KTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTAD 81

Query: 66  PRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKCKHS 125
           P  AA +   SRGL  +++KSLPVF  S +   DPI CAVCLSEFEE+E GR++P C+H+
Sbjct: 82  PSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHT 141

Query: 126 FHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPP-----DVSVSIHDPDIPEPGPSSGSTR 185
           FHV CIDMWF+SH TCPLCRS V+   G ++       +V +++    +    PSS S  
Sbjct: 142 FHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGL 201

Query: 186 SGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTANF----VKSLS 245
           + E  G  S   L        A+ E  +      + +D      S  + +F     + LS
Sbjct: 202 TDEPHGSGSSQMLREDSGRKPAAIE--VPRRTFSEFEDELTRRDSPASQSFRSPMSRMLS 261

Query: 246 FKRILCRDKRDGVSP 251
           F R+L RD+R   SP
Sbjct: 262 FTRMLSRDRRSASSP 274

[Close]

BLAST of MC07g0800.1 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30
Identity = 76/156 (48.72%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 8   YALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPRH 67
           YAL+GKIML ++IVL   VI+++C H Y R      NRR   R R H R     +A PR 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLR---TLSASPRD 81

Query: 68  AAAAAAPSRGLPQSILKSLPVFVHSAKPDPDP---ICCAVCLSEFEENEIGRIIPKCKHS 127
            A        L Q++L  +P+FV+S+K  P P     C+VCLSEFEE + GR++PKC HS
Sbjct: 82  QA--------LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHS 141

Query: 128 FHVGCIDMWFYSHVTCPLCRSEVQP-----ETGSDN 156
           FHV CID WF S  TCPLCR+ VQP     ETGS +
Sbjct: 142 FHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

[Close]

BLAST of MC07g0800.1 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 7   RYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPR 66
           RY+L+GKIML ++I+L   VIL++C H Y R       RRQ  R RR   AH    A  R
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAAR 80

Query: 67  HAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPI-CCAVCLSEFEENEIGRIIPKCKHSF 126
               +++    L  ++L+ +P+FV+S K    P+  C+VCLSEFEE++ GR++PKC H F
Sbjct: 81  DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVF 140

Query: 127 HVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSV---SIHDPDIPEPGPSSGSTRSGE 186
           HV CID WF S  +CPLCR+ VQP      P  V+    S+   +  E G SS S  S  
Sbjct: 141 HVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDES-- 200

Query: 187 EPGCPSPS 191
           E   PS S
Sbjct: 201 ESSTPSSS 202

[Close]

BLAST of MC07g0800.1 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 78/187 (41.71%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 15  MLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAPRRRRHRRAHFVFTAEPRHAAAAAAP 74
           ML   I++L +VILM+ LHLY R YLL    R +P  R    A   F  +P      ++ 
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLL----RSSPFNR--TTAASTFFTDP------SST 60

Query: 75  SRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGRIIPKCKHSFHVGCIDMWF 134
             GL  SI+KSLP+F  SA      + C+VCLSEF++NE GR++P CKH+FHV CIDMWF
Sbjct: 61  PGGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWF 120

Query: 135 YSHVTCPLCRSEVQPETG--SDNPPDVSVSIHDPDIPEPGPSSGSTRSGEEPGCPSPSE- 194
           +SH +CPLCRS ++P  G       +V++SI DP   +     G+  +G+    P  S+ 
Sbjct: 121 HSHSSCPLCRSLIEPFAGGVKSTMDEVAISISDPVYGDTNHHEGTETTGD--SVPEDSQR 173

Query: 195 LPSLVEL 199
            P+ +E+
Sbjct: 181 KPAAIEI 173

[Close]

BLAST of MC07g0800.1 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-19
Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 12  GKIMLGAIIVLLFVVILMICLHLYVRLY------------LLSSNRRQAPRRRRHRRAHF 71
           GK++L +I+ +   ++ ++ LHLY RL+            + S +       R  RR  F
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRF 81

Query: 72  VFT---AEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEFEENEIGR 131
           VF     +P H A       GL   IL+S+ V V       D + CAVCLS+  + +  R
Sbjct: 82  VFAQSQEDPLHNA-------GLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKAR 141

Query: 132 IIPKCKHSFHVGCIDMWFYSHVTCPLCRSEV 148
           ++P+C H FHV CIDMWF SH TCPLCR+ V
Sbjct: 142 VLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165

The following BLAST results are available for this feature:

BLAST of MC07g0800.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	5.7e-45	45.10	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	3.3e-29	48.72	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	1.8e-27	42.55	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8LF65	1.2e-26	41.71	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
P0C035	5.9e-18	37.09	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]

BLAST of MC07g0800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138684.1	1.23e-178	100.00	RING-H2 finger protein ATL2-like [Momordica charantia]	[more]
XP_038875154.1	5.49e-99	72.31	RING-H2 finger protein ATL2-like [Benincasa hispida]	[more]
XP_008458410.1	2.29e-93	67.49	PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo]	[more]
XP_004150504.1	7.13e-90	66.95	RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein C...	[more]
KAG7013653.1	5.17e-89	65.34	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of MC07g0800.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAT0	5.97e-179	100.00	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 ...	[more]
A0A1S3C7X4	1.11e-93	67.49	RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV...	[more]
A0A0A0KF25	3.45e-90	66.95	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 P...	[more]
A0A6J1L074	1.39e-88	65.31	RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=...	[more]
A0A6J1H376	1.44e-88	66.14	RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 P...	[more]

BLAST of MC07g0800.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	4.0e-46	45.10	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	2.4e-30	48.72	RING/U-box superfamily protein	[more]
AT3G62690.1	1.3e-28	42.55	AtL5	[more]
AT4G15975.1	3.2e-27	41.71	RING/U-box superfamily protein	[more]
AT1G53820.1	4.2e-19	37.09	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 102..143 e-value: 7.6E-6 score: 35.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 102..144 e-value: 9.1E-10 score: 38.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 102..144 score: 12.341748
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 64..150 e-value: 4.3E-18 score: 66.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..189
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 6..217
None	No IPR available	PANTHER	PTHR45768:SF34	RING-H2 FINGER PROTEIN ATL64	coord: 6..217
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 102..144 e-value: 5.72525E-16 score: 67.7203
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 82..160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC07g0800	MC07g0800	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC07g0800.1-cds	MC07g0800.1-cds-MC07:15605993..15606751	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC07g0800.1	MC07g0800.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane