MC07g0448.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC07g0448.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTubulin-specific chaperone A
LocationMC07: 12509755 .. 12515364 (-)
Sequence length948
RNA-Seq ExpressionMC07g0448.1
SyntenyMC07g0448.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCGATGATGTGGGCTGACTGGATAGCTGATTAGGAAAGTTTTTTATTAGTTCAATAATATTTTGTTTTGTAAAGGAATTTAATAACATTTTTATGGTGAGCAAACTTTTCATCTCCTTCCCCTTTTTTTCTCCTCCTCTTTTTTCCGGTGAACTTCGCCGCTGGCCACCTCCTCGCCTCCGCCGCCCATTGTGCGCCTCCGTCGCCGCCGCTCGAGCGATAGCTGTCGTCCGCCTTCTCGCTCTCCCCCATCCCAGATCTGGAACAGGAAACCCTTCCAGATCTGAAAATTTCGCTCACCAAGCTCCCTCTGTGATTTATATCACTTTCTCCGTTTGGTTCTTGTCCGGCTCCTGAGAACGAAGAAGAAGAGGAGTGATCTGCTTCCCTTGTAAAAGGTTCAGGTAAATTATAGCTAATTTTTGCCTTCTGATACTGTTTGCGGGTTCTTATGATCGGGTGATTTGTCAATGGAGCTCTTCGTTTCCTTTATTTAACTCCAAATCCCTTTGTGGTTTTCTTGAACTGAAAATGGCATTGCATTTCGAAGATCTTAATCGGAATCTAGCACTGAGGAATCCAATTCGAGAGGCTTGTTCTTATTTGTATTTGTTATCTGCAGTTGGGTTTTGTCGTTTGGAACTTTGTGACTATTACATGAGTGGAATTCTTCATTTGAGATAGGAAATTTCACGATTTCTAGGGCTAGAATTAGCTGCGATGTGCTTTGTGATTGGATTTCTTACACTCATTTAGTGTAGAGAAGGACTTTGGGATGGATGTAAAAATGGACAAAAAGAACATGGAAGAGAAAGATGACTATGCTGAATATGTTCCCATGGCAAAGCGTAGAGCAGTGGAATCTCAAAGATTTTTCTGCCCAAGGGAAAGGCTTCTGCCCTTGTCTAAGGGTTGGAGAAATCAAGGCTTGCCGAAGCCAAGCCCAGTCTCCTTGTAAAGACATTTCAGACGGCGGCGAAGAAGCGGCCGGCGTCAAAGTTCACCAGAAAAGAGAGGAACAAGGAGATGAAAACTCTACTCACTATAAAAATATTATTAAATTAATAAAATTTTCCTAATACCAGCTATACAATCAGTCATTTAACAACCACATCATTTATTAGAGTTAGTCAATTAACCGTCAAACCATTTTAGGGACTATTTAGAACCATTTCCTAAACCTTAGGACTAAAAATATCTACTTTGAAATTTCAAGAACCAAATTGGCACTTGCTCGATAAGATTTGTCCAAAAAAAAAAAATTAACATCCACAGAAGAAATCAGGGTCTTATTCTCCTGCTATTGGTTCGTCAAATTTTGGTCTGAAAATTGCTTGACGGCCGAATTTTGCCGGAGCATGTAGGTTTTCCATGGCATCTTCTAGCTTTTGTTGTTCTTTTTCAATATAATTGGGCCTCTAATGCACCAGATTGATTTCCAATCAGAACACCGAGGCAGAGGGTACGTGTTAAACCCTTGCATCTCAAAAACCCTACTGGCGCTACTTTTTTTATTTTTTATTGTCTGCCTACTTTAATGCTGGGGTATCAGCTATGATCTCATCTACTTTTCCTAAACTTGCTTAGATTCGAGTTTTATAATGTGGGTAGTGCGGTTATGCTAATGTTAGGCCTTAATCGTCTCCGCAAATGAAATGGGCATTTGGAGTTTTTGTTGTTATGATTTGACATTTGACATCTCTGGATATCCATAGTGTAGGCTGGAAATCAGTCCGTGTAACCGAGCTAAGTGCAGAGTGCTGACTAGAAATCTCAGGCTGGAAGTTATTCTTAGACCGGGAACTTTCTTCTGATTATGTGACTCTGAGCTAGCAGCAACGTTTCAGTTTCTTCAGAACAATCAGTTTTGTTTTAAGAGCTCATAGATTACTGAAGGGTGTCTTATTCATCCCCTAGGCCAGTAAATATGGCTTTGACGTGATTAGAAACACAGAGTTGATGCACAATTATTATACAACATTCTCAACTGTTTGAGAAGATACTCATTTATCATCTAACTTACCTTTTCTTTTTCTCCTTGAGCAAGAACCTAACTGTAAAACCTTGACTTGGGATCCATGGTTATTGAAGAGAATCTTGTTGCTCCCCATGAAAGAAGTTTTGTTTGAAATCGTTCTTTGAAGTATCTTCAGGACCTCAGGTATCAGAAATGTAGGCTGCAGTTCATCGAAGTTAAAACATTGAAGTTTGCTCCCCATGAAAGAAGTTTTGGTTGAAATCGTTATGTATGGTCAACACTGAGTCAATTGACCATATGTTCATTCAATGCTCATTCGCGGCTCGGGGTTGGCTTTTTCTTATGGATATTTTTGGTATGTCAATTTGCTTCCCTAGTCGTATAGATGATTGGTTAATAGATGTTCTTCATGGCTGGAGTCTCCCTAAAAAAGCAAGGATTTTGTGGAGGTGTGCTTTGAGAGCTCTCCTTTGGCATCTTTGGTTGGAACGAAATCTTCGAGTCTTTGAAGATAAGTCTTCCTCTTTTGATATTTTTTGTAGAAATGTATAGTACAACACACTGCCTCTTGGTGGTGCATCAACTGTAGCAAATTCTTTTGTAACTACAACCTTTCCATGGTTTTGAATTGTGTAGTCCTTTTGGGTGGGGTTTTCTCTACCACAGCCCTTAGGTTATTCCTTTTTGTTTTCCTCGTGGAATATACAAGTTTCTTATCTAAAAAAAAGAAGTTTGTGACTTTCTAATCCCTGCCATTGCTTGATTTCACTATAAAAGAAATTTTGTATTTGAAGGTGTGGGAATGAATTTTATTGCCACCCAGGAGTTTTGAAGAAGAACTTACTTTCACGACTGAAGAAACTTTGACAACTTAGTTCGGTGTGGAAACTTTTTTTGGAAACCATGTCAAGAGTCTAAAGCTCAAACACCACCTCAGAGTTTAAGAAGAGGAAAGAACATATTCTGTGTTGTATTTCATACTACATTGAAAACGGAGAAAGGAAGCGGATTACAATGTGCCTAACTGACTGGCTACTATGAATTAATTGCATGAATCCTAATAGCCCTTAACAAATTAACTATAAGAAACTGACAACATTAATTAAAAAAGAACTTAGCTCATATCTCAATCAATCGACTCTTAAAAGTATTAATTAAATCTGTGCTGTCATGCTTTTTGGCATTCCCAAGATTAGTTCGTGAAAAGCTAAGTGTTCTCTGTTTGCAAGTTCTCGAGTCGTTGTGTATTTTATCCCTTCCTGATTTCTGACCCTGGTAATTTTGGCGCTAAATTGCTTCAATTCAGTGAATTAAATTTAGGGTGTGAAAACTAATTAATAGGATGTTTATGGTTTTCAAATCCATGATAAGTGCTTCTTGTGATAGGTAAGGATGGCTACTGTAAGAAATCTGAAGATCAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTGGAGAGAGAGGCTGCCAAAACAGCTGACATGAAAGAAAAGGGAGCTGACCCTTATGACCTTAAGCAACAGGTACCTGTGTGTGTGTTAAGAAGGAGATGGGTTGCATTCTCAATCATATACTGCTGACTCTTAAAGTATATGTCTTCATTGATTCACTAAAAATAGTATATGGTATAAAATCATTAATGAATCTATAACAGACAATGAAGTTTATTTCTTTTCCCTTTAGCTTGTGTTGTATTCTTTTTTATGATTAGAAACTGATATGACAAAAATAAAATAAGTACAGAGAAGGAAAATATGTATTTGTAAATTTCAAGTTATGATCATTAATTTCTGAATATCATCAAATTCTTTTTGCATTTTGCATAAGGTGTCATGCTTTTATCTTCCGTTGATTTTGTAAAATTTTCTTGTTGTGGTTAGGATTTAATGTCTCAAATTGCCATTTCCCAGTTCTGTATGATTAGTCTGCCTGACTGCTTGTGATATTGTTTGTGCTTTGTGCTATCTGTTTCTTTGTAAGACATATACCTCTAAGGATATCCAAAAACAAAACCTTGGATGGACAAAAATGTTAAACATGAAATCGACAATAGAACTTGTGAGAATGAAGATGAGTGGTTTGGTCTATAAACTATAAAGAGGAAGAATGGTCTCAAATTTGGAGGATAGAGATGGTAATCAGGTAGGACTTTTGAAATTGTTGTGGTCTTTTACTTTCTCATTTGATGTAGACTTGTAGTGGATTAGTTAGCTTTAGTACTCTCTTTGTAATTTAGCTTAATATTTTATTTTACTTGTTTACTGTTTATTTCCTTAGGTTAGTTGTAGTTAGTTACCATGGGTAAAATACTTGCTAAATTACAAAGAGAGCCCTAAAGCTAACTAATCCACTAAATCATCATCGCTGTTGAACTTTATTTTCAGAATATTATAAATTTAAAACAACGAACTAAAACATTATTTATCTATTCAGAATGCCCATAGAACAACTCTTGTTTATCAATTTGGGCCCAATGGGGCAGCTAAGGTTGGGGTCGGTTAGTCCTACAGGTTTGGAGTTCGAACTGTTTGGTGAGCTTAATACCATAAAACCCTTGATGTCTCCCGGATCTGGGCTTTGGGGCGGCGTGGGTGTCCGTGGATATAGGGGAGCAAAACTCCGACTCCTAGTTAAAAATATATATATATATATATATATATATATAGATTTTGGTAACGCAAATCCACACAAGTACCAAGATTATAGATTTTGGTACAAAAGTGCTCTTTCTCTGATAAGTCGAATTCTTTTTATTATTTTGGTGAGCTTGTACCGTTTACAGTCTAAAATTGGAGTGTGCAAGACGTAAACTATTCCACCTATAAAATTGGAGGGTTTCTTTCGTAATCTCCCTCTTTGAGCGAAGGGACACCACCTTGTCCCTCGGTCCCTTAGGTTGTTCCTCAGCCTTGGTGGTTTTCTGAATGAAAGTGTTGCCTTGTTATAAAACATTGATTAATTTGAGCTACATTTTACTCTTTTAACTTCTGGGTAATGGAGTTTGAATGTAATCCCATCATCATATGAATCTTCTTGAATTATTCTTCGCATTATTAGGATTTTACAATTTTCCTTCTCAGGAAAATGTGCTGGCTGAATCAAGGATGATGATTCCAGATTGTCACAAGCGTCTGGAGGCCTCCTTAGCTGATCTGAAAGGAGCATTGGTATTATCATTAGCTTTCCTTTTCATTCCTCTCTTCCTTTTCTCTCCTGACGAGCTTGATTCTAAAAGGTTTTGTGCACGTGCCCGGTTTTGATTTTTCGTACCTAAAGCATACTTTTTTTTTTCTTCTCCTTCCCCATCTCCAGGCTGAACTGGAAGAATCTACACAAGAGAAAGGCCCAGAATTCGATAATGCTCGGAGCACGATCTCCGAGGTCGAGAATTTCCTGAAGACAACCGAGGAACAGTAGTGAGTTTGACACAGATCATAATTACAGAAAACAGAATTTGATACTGATGCCTGATTGATCAAATGACACTGACTTTTTCAATATATTAGCTTCTTATATTTGGCTTTTGCATGATGTGTCTGAAATTTGGATAGACTCATCTTGGTCTGTTATTCACTACCTAGCATTCAAGTTTAAGAATTGAACTTTTCT

mRNA sequence

TTCCGATGATGTGGGCTGACTGGATAGCTGATTAGGAAAGTTTTTTATTAGTTCAATAATATTTTGTTTTGTAAAGGAATTTAATAACATTTTTATGGTGAGCAAACTTTTCATCTCCTTCCCCTTTTTTTCTCCTCCTCTTTTTTCCGGTGAACTTCGCCGCTGGCCACCTCCTCGCCTCCGCCGCCCATTGTGCGCCTCCGTCGCCGCCGCTCGAGCGATAGCTGTCGTCCGCCTTCTCGCTCTCCCCCATCCCAGATCTGGAACAGGAAACCCTTCCAGATCTGAAAATTTCGCTCACCAAGCTCCCTCTGTGATTTATATCACTTTCTCCGTTTGGTTCTTGTCCGGCTCCTGAGAACGAAGAAGAAGAGGAGTGATCTGCTTCCCTTGTAAAAGGTTCAGGTAAGGATGGCTACTGTAAGAAATCTGAAGATCAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTGGAGAGAGAGGCTGCCAAAACAGCTGACATGAAAGAAAAGGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGATTCCAGATTGTCACAAGCGTCTGGAGGCCTCCTTAGCTGATCTGAAAGGAGCATTGGCTGAACTGGAAGAATCTACACAAGAGAAAGGCCCAGAATTCGATAATGCTCGGAGCACGATCTCCGAGGTCGAGAATTTCCTGAAGACAACCGAGGAACAGTAGTGAGTTTGACACAGATCATAATTACAGAAAACAGAATTTGATACTGATGCCTGATTGATCAAATGACACTGACTTTTTCAATATATTAGCTTCTTATATTTGGCTTTTGCATGATGTGTCTGAAATTTGGATAGACTCATCTTGGTCTGTTATTCACTACCTAGCATTCAAGTTTAAGAATTGAACTTTTCT

Coding sequence (CDS)

ATGGCTACTGTAAGAAATCTGAAGATCAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTGGAGAGAGAGGCTGCCAAAACAGCTGACATGAAAGAAAAGGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGATTCCAGATTGTCACAAGCGTCTGGAGGCCTCCTTAGCTGATCTGAAAGGAGCATTGGCTGAACTGGAAGAATCTACACAAGAGAAAGGCCCAGAATTCGATAATGCTCGGAGCACGATCTCCGAGGTCGAGAATTTCCTGAAGACAACCGAGGAACAGTAG

Protein sequence

MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ
Homology
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BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match: O04350 (Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-41
Identity = 84/112 (75.00%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTE 113
           MIPDCHKRLE++LADLK  LAELEE+ +++GPE ++A+ T+++VE    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]
BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match: O75347 (Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0 

Query: 4   VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 63
           VR +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMMIP
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVE 106
           DC +RLEA+  DL+  L    E   E+  E+  AR  +  V+
Sbjct: 66  DCQRRLEAAYLDLQRILE--NEKDLEEAEEYKEARLVLDSVK 105

[Close]
BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match: Q6PEC1 (Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.4e-13
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0 

Query: 4   VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 63
           VR +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMMIP
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVE 106
           DC +RLEA+  DL+  L    E   E+  E+  AR  +  V+
Sbjct: 66  DCQRRLEAAYTDLRQILE--SEKDLEEAEEYKEARIVLDSVK 105

[Close]
BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match: P80585 (Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 5.7e-13
Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 0 

Query: 4   VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 63
           +R +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMMIP
Sbjct: 6   LRQIKIKTGVVKRLAKEKVMYEKEAKQQEEKIEKMKAEACDDYGIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVE 106
           DC +RLE + ADL   L    E   E+  E+  ARS +  V+
Sbjct: 66  DCQRRLEIAHADLTQLLE--NEKELEEAEEYKEARSILESVK 105

[Close]
BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match: P48428 (Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 0 

Query: 4   VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 63
           VR +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMMIP
Sbjct: 6   VRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVE 106
           DC +RLEA+  DL+  L    E   E+  E+  AR  +  V+
Sbjct: 66  DCQRRLEAAYTDLQQILE--SEKDLEEAEEYKEARVVLDSVK 105

[Close]
BLAST of MC07g0448.1 vs. NCBI nr
Match: XP_022155762.1 (tubulin-folding cofactor A [Momordica charantia])

HSP 1 Score: 214 bits (544), Expect = 1.29e-69
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ 114
           MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ 114

[Close]
BLAST of MC07g0448.1 vs. NCBI nr
Match: XP_038907024.1 (tubulin-folding cofactor A [Benincasa hispida])

HSP 1 Score: 193 bits (490), Expect = 2.16e-61
Identity = 100/113 (88.50%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEIEAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLE++L DLKGALAELE+STQEKGPEF++ARSTI+E+E+FL+TTEE
Sbjct: 61  MVPDCHKRLESALVDLKGALAELEKSTQEKGPEFNDARSTITEIESFLQTTEE 113

[Close]
BLAST of MC07g0448.1 vs. NCBI nr
Match: XP_023006149.1 (tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006151.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006152.1 tubulin-folding cofactor A [Cucurbita maxima])

HSP 1 Score: 192 bits (488), Expect = 4.35e-61
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLE++LADLKG L ELE+STQ KGPEFD+ARS I+E+E+FLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of MC07g0448.1 vs. NCBI nr
Match: XP_022959143.1 (tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959145.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959146.1 tubulin-folding cofactor A [Cucurbita moschata])

HSP 1 Score: 192 bits (487), Expect = 6.18e-61
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLEA+LADLKG L ELE+STQ KGPEF++ARS I+E+E+FLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]
BLAST of MC07g0448.1 vs. NCBI nr
Match: XP_023548059.1 (tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548061.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (485), Expect = 1.25e-60
Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLE++LADLKG L ELE+STQ +GPEFD+ARS I+E+E+FLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVRGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match: A0A6J1DQ83 (Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 6.26e-70
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ 114
           MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEEQ 114

[Close]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match: A0A6J1KV46 (Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV=1)

HSP 1 Score: 192 bits (488), Expect = 2.11e-61
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLE++LADLKG L ELE+STQ KGPEFD+ARS I+E+E+FLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match: A0A6J1H416 (Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 SV=1)

HSP 1 Score: 192 bits (487), Expect = 2.99e-61
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLEA+LADLKG L ELE+STQ KGPEF++ARS I+E+E+FLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match: A0A5A7T9L5 (Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002620 PE=3 SV=1)

HSP 1 Score: 187 bits (476), Expect = 1.42e-59
Identity = 97/113 (85.84%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113
           M+PDCHKRLE +LADLK ALAELE+ST+EKGPEFD+ARSTI+++E+FLK TEE
Sbjct: 61  MVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 113

[Close]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match: A0A5D2SZW3 (Tubulin-specific chaperone A OS=Gossypium mustelinum OX=34275 GN=E1A91_D11G362200v1 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 2.02e-59
Identity = 96/112 (85.71%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVRNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTE 112
           M+PDCHKRLEASLADLK  LAELEE+ +++GPEF++ARSTI+EVEN  +TTE
Sbjct: 61  MVPDCHKRLEASLADLKATLAELEEANEKEGPEFEDARSTITEVENLFQTTE 112

[Close]
BLAST of MC07g0448.1 vs. TAIR 10
Match: AT2G30410.1 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 170.6 bits (431), Expect = 7.1e-43
Identity = 84/112 (75.00%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTE 113
           MIPDCHKRLE++LADLK  LAELEE+ +++GPE ++A+ T+++VE    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]
BLAST of MC07g0448.1 vs. TAIR 10
Match: AT2G30410.2 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 170.6 bits (431), Expect = 7.1e-43
Identity = 84/112 (75.00%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTE 113
           MIPDCHKRLE++LADLK  LAELEE+ +++GPE ++A+ T+++VE    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

The following BLAST results are available for this feature:
BLAST of MC07g0448.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O043501.0e-4175.00Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2[more]
O753472.0e-1342.16Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3[more]
Q6PEC14.4e-1342.16Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1[more]
P805855.7e-1343.14Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2[more]
P484281.3e-1241.18Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3[more]
BLAST of MC07g0448.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155762.11.29e-69100.00tubulin-folding cofactor A [Momordica charantia][more]
XP_038907024.12.16e-6188.50tubulin-folding cofactor A [Benincasa hispida][more]
XP_023006149.14.35e-6188.50tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding co... [more]
XP_022959143.16.18e-6188.50tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding ... [more]
XP_023548059.11.25e-6087.61tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-... [more]
BLAST of MC07g0448.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQ836.26e-70100.00Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3... [more]
A0A6J1KV462.11e-6188.50Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV... [more]
A0A6J1H4162.99e-6188.50Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 ... [more]
A0A5A7T9L51.42e-5985.84Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5D2SZW32.02e-5985.71Tubulin-specific chaperone A OS=Gossypium mustelinum OX=34275 GN=E1A91_D11G36220... [more]
BLAST of MC07g0448.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30410.17.1e-4375.00tubulin folding cofactor A (KIESEL) [more]
AT2G30410.27.1e-4375.00tubulin folding cofactor A (KIESEL) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..89
NoneNo IPR availableCOILSCoilCoilcoord: 14..41
NoneNo IPR availableGENE3D1.20.58.90coord: 1..113
e-value: 2.9E-42
score: 145.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..107
NoneNo IPR availablePANTHERPTHR21500:SF4TUBULIN-SPECIFIC CHAPERONE Acoord: 1..113
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 7..87
e-value: 1.8E-27
score: 95.5
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 1..113
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 3..104

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC07g0448MC07g0448gene


The following utr3 feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC07g0448.1-utr3MC07g0448.1-utr3-MC07:12509755..12509946utr3


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC07g0448.1-cdsMC07g0448.1-cds-MC07:12509947..12510051CDS
MC07g0448.1-cdsMC07g0448.1-cds-MC07:12510197..12510283CDS
MC07g0448.1-cdsMC07g0448.1-cds-MC07:12511841..12511993CDS


The following utr5 feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC07g0448.1-utr5MC07g0448.1-utr5-MC07:12511994..12511999utr5
MC07g0448.1-utr5MC07g0448.1-utr5-MC07:12514960..12515364utr5


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC07g0448.1MC07g0448.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007023 post-chaperonin tubulin folding pathway
biological_process GO:0007021 tubulin complex assembly
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
molecular_function GO:0048487 beta-tubulin binding