MC06g_new0550.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC06g_new0550.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 26487482 .. 26490067 (+)
Sequence length	327
RNA-Seq Expression	MC06g_new0550.1
Synteny	MC06g_new0550.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGGCAACCGGAGACGAAGGAGAAACTAGCGTACTGTTCTGATGACGAAGAAGAACGGAGACAGCAGTTGGAGATGAAGGAACGCAAACGACGGTCAGAGACGAAGGAATGGACGGAAATAGAACGATAGAGGAAGAAGAAAAGTCGGAGGAAGGAGGTTTTCGAATTTTTTCATTAGGCAAAATTGAAGTGATTTAAAATGTAACCTCCAAGTATCCAATTTTAGATTTTAAAAATTAATTAATATTGATATGAGATACAAAATGATATATTAGTAAATTGGATGATGGGTACCATTGAGGTTGTTTCATGACAAAAGTGTAAATTTTATACAATTCAATCATTTAATGTAATTATAGTCTCTAAATAGCCTATCAATGTACTAATCTCTAAATAAAAAGTTATAACTCATTAAAAAAAACGCAAACAGCAAAGAAGAGTAGTTTCTTCTTTGTTTGGTCAATGGAAAAACTTCTTAAAATCAAGGAGGGCATGATTAAATATTTGCTTTTTTTAAAAAAATAATAAGTCGTAAAATATTTAATGGTGTTAAGGTGAAGTTCCTTTAAGAAGTCAAGTTTTTTCCTTGCTCAATTGCTCTCTAGCTGCCTCTCTCCCTACCTTTGCCTCGACTCATCTACCTCCGATCAACTTTGCTATCGTTGGCCTCTAACCAACTATGTCGCCACAACTAACTAGGTTTGAATTTTTTTTTCTAAATCTAAAAATATATTACTATACGTCAATAAATACACATATATTATCTAAAACAGTTAACGTGTCTATGTCCTACATTTTAAGAAATTCGTGTGTCGTCGTGTCTACAAAGAATACCAATCTTAAGTCAACTATCAACCCTAATCGTTGAATGCAAAAGGAAGGAAAGGAAGGAAAGAACGCACGTGGATGGAACAAGAAACATTCGCGTGAGTGACAACCTAAGGAGCTCTAGCAATCGAATTAAAAGTATGCTATCTAACTGCAATAAACTTTCCAAGAATAGGAGACCAAGAGTAAGAAGTTTGCCTACTTTAGTCCTAAGGATAGTTTGGGTGGCTTGGGACTTTAAGGAATATCCTTAAGGTCTTGGGTTCAAGTCACATGGAATGCAACTCTACCAAACAATGACCCCTTGCCTATGTACGGGTATGGGATAATGTGCATACTCCCAGGTATAGGACCAAAGGGCCGTCGACTCTTGGATAATAATAAAAAAATAAAGAAGATTGCCTACTTTAGAAACCAAAATCAGTTCAAGTCATGGAGCATTGGATCTTTGAATTAATTTTTAGCTAAACGAGATGATTATTTGATGGCATCTCGAGGTTGTGTACTAAAAGGATGGTGAGCATCTCGTGATAGATCCTAACTAAACTATTAGAGCTGAAACTAATTTTTAAAACAAAATATGTGTTAAATTTGTAAAGAGAATACAATCAAAGTCTTACATTAACTAAGAAAGAGTTTATCTATATATCCTTTGGTATGAGGTCTTCTAAGTGAAACCAAAAACAAAGTCGTGGATACTAGGCCCAAAACAAACAATATCCTATGGAAAAGTTTAAAGTTGGAAAACTATTTCATAATGTATAAATTGCTTTGATGGAATGGCATCTTCTTGCTTTAGTTTAAAATTTGTAGATCATGTTGGAATAAAAAAAAAAATACTCAATTGATTTATTAAACAAGCTGATGAAGATTAGCTTCACACGTTAGCACGAGAAGGAACAAAAAAATGCAATTATAACTTATTTGCCCAACGATTAGTTGGAATGCAGGAGTTCGAATATAGGACCTCCCGCTCTGATACCATCTTAAGAATGAACAAACCACCACTCAACCCAAAAGTTTAAACTAATGGATTTGGTAAATTTAATTCATTAATATGGATTCTGACATAAACTATTAATACATACCATATATATTAAACAAAGAAAAAGAGAATTAAGCATAAAAGAAAACGTATCGTAGTAGGGAGTTGAAAAGGAATGCAAAAATTTGCGAGCTTGTCGTCATCATTACTCCATAATCTTGTGATTTATGAGAATCTAAACAATATCAATAGGTTAGCAAGACTAGATAGCCTGTCAATTTCATGCCATTCAATTTTGATCAGTCAAAAATTAAAAATACTTTTAGTTTTGTATCGACTGATCAATTGTCCATCAATTCAGCCAGTCGATTTTTGTGAATGTCGGAAGGGAGATTAAAATAATAATAGTCAAATGTTTAAAAGTTACATTATGATATAAATTAAAATAATAAAAAATACAGCATACCATGAATGTGTTAGAATATTTGATATTATTCATCAAGATTAAAATCTTTAAACATTTGTACTTTGTTTTGCAGAGCAAATAGGAAACTAACAAAGACGAGACTTGGATTCCTCAAAAACCACCAACCTAAAAAGCTCAACACTGATGCAACAATCCTCAATGAAAATGTTGGATTTGAGGCACTAATTTGTGGTTGTAAAGGAGCAGTAATGACTATAGTGAGAGGATTCACGAAACTCACAAATATGGTGGAGCTTGCAAAGAAGATAATTGTAAAGGAGAAAATAGACTTTGACAATTGA

mRNA sequence

ATGGACGGGCAACCGGAGACGAAGGAGAAACTAGCGTACTGTTCTGATGACGAAGAAGAACGGAGACAGCAGTTGGAGATGAAGGAACGCAAACGACGAGCAAATAGGAAACTAACAAAGACGAGACTTGGATTCCTCAAAAACCACCAACCTAAAAAGCTCAACACTGATGCAACAATCCTCAATGAAAATGTTGGATTTGAGGCACTAATTTGTGGTTGTAAAGGAGCAGTAATGACTATAGTGAGAGGATTCACGAAACTCACAAATATGGTGGAGCTTGCAAAGAAGATAATTGTAAAGGAGAAAATAGACTTTGACAATTGA

Coding sequence (CDS)

ATGGACGGGCAACCGGAGACGAAGGAGAAACTAGCGTACTGTTCTGATGACGAAGAAGAACGGAGACAGCAGTTGGAGATGAAGGAACGCAAACGACGAGCAAATAGGAAACTAACAAAGACGAGACTTGGATTCCTCAAAAACCACCAACCTAAAAAGCTCAACACTGATGCAACAATCCTCAATGAAAATGTTGGATTTGAGGCACTAATTTGTGGTTGTAAAGGAGCAGTAATGACTATAGTGAGAGGATTCACGAAACTCACAAATATGGTGGAGCTTGCAAAGAAGATAATTGTAAAGGAGAAAATAGACTTTGACAATTGA

Protein sequence

MDGQPETKEKLAYCSDDEEERRQQLEMKERKRRANRKLTKTRLGFLKNHQPKKLNTDATILNENVGFEALICGCKGAVMTIVRGFTKLTNMVELAKKIIVKEKIDFDN

Homology

The following BLAST results are available for this feature:

BLAST of MC06g_new0550.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0550.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0550.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0550.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC06g_new0550	MC06g_new0550	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g_new0550.1-cds	MC06g_new0550.1-cds-MC06:26487482..26487579	CDS
MC06g_new0550.1-cds	MC06g_new0550.1-cds-MC06:26489839..26490067	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC06g_new0550.1	MC06g_new0550.1-protein	polypeptide