MC06g_new0340.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC06g_new0340.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Glucose-methanol-choline (GMC) oxidoreductase family protein
Location	MC06: 15454464 .. 15462326 (-)
Sequence length	1842
RNA-Seq Expression	MC06g_new0340.1
Synteny	MC06g_new0340.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGGACCGGTGCTACTGCAGCAGCCATCAACGACAACAAGTGGCGTCATCGGATGAAGACTAGACCTATTTTTGAGTTAAGCCAGGAGTGTCTTTCTCGAATGAAAACATCAATCATGGTCTGTTCCATAAAGCTGAGCTTTTCGGTTCGCTCCCCTGGCCTTCTTACTGGTCTACCTCCTTTCTCTTGATGGAATATAACAATGGCTAGTCTGTGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGGTAAAGGAAGGGAAATCAACCGAGATCCCGTTAGTAGCTGCGAGCAAGAGCGGATTGGGGGTTTCAAGAAAAACAAACACGAAGCTTCGTTCCTCAGCAAAGGGTTCACTTCTTTTTCGCCAGGTTGTAGCTTTAGGGATTTTTGTTATGCTACTTTAGGATTAAAAAAAGGCTTCAAGCTCAAGTGCAAGCTGAGTAAACTTGTTCCGTTTTACTCCTATCAAAAAACTAACCCTTCAACATGGATGATAGAAATGCTAACCAAGTGACACTCTTACTTATACACTAATAATGGAGAAAGGCCATGGGTACTCATGCTGATATGAGACCAAAGATACATAAGCATCATGTTACAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGGTACAGGTAGCTTGACCACCTTACTCGTCATTGAAACACAAGCTGGAGACATATCGACCTATATTCCCACCAGAAAGAACCTCTTGGTGGAGTCCCCCCGAGGACAGAATAGCACAACTTAGTGACTAAGAGCGGAGGGAGAGCCCGTTGCGCCTTGTTTTTGTTTGACCGGCCTATCTTCTTTCTAGAAGCAAGCTCCCTCCGATTGTCAAGTCCTTGGGCGGCTCTCGATTTTTTAGCATGTTGGGACCTTCCCTTTCACCTAAACTGGTCAAGAGAGATGAACCCGCACCACATACATTTTCTAACCTTCGAATCGAAACCCCCGGGTTATATCTCTGAATCAGCTTATTCACTAGACTGTTAAGCCATTGAGTCCCTATAATGGGTTGACTTTGGATCATTCAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCCGACTCGAANGTAGCTTTAGGGATTTTTGTTATGCTACTTTAGGATTAAAAAAAGGCTTCAAGCTCAAGTGCAAGCTGAGTAAACTTGTTCCGTTTTACTCCTATCAAAAAACTAACCCTTCAACATGGATGATAGAAATGCTAACCAAGTGACACTCTTACTTATACACTAATAATGGAGAAAGGCCATGGGTACTCATGCTGATATGAGACCAAAGATACATAAGCATCATGTTACAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGGTACAGGTAGCTTGACCACCTTACTCGTCATTGAAACACAAGCTGGAGACATATCGACCTATATTCCCACCAGAAAGAACCTCTTGGTGGAGTCCCCCCGAGGACAGAATAGCACAACTTAGTGACTAAGAGCGGAGGGAGAGCCCGTTGCGCCTTGTTTTTGTTTGACCGGCCTATCTTCTTTCTAGAAGCAAGCTCCCTCCGATTGTCAAGTCCTTGGGCGGCTCTCGATTTTTTAGCATGTTGGGACCTTCCCTTTCACCTAAACTGGTCAAGAGAGATGAACCCGCACCACATACATTTTCTAACCTTCGAATCGAAACCCCCGGGTTATATCTCTGAATCAGCTTATTCACTAGACTGTTAAGCCATTGAGTCCCTATAATGGGTTGACTTTGGATCATTCAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCCGACTCGAAATGACCGACTCAAATGGGCGAGGGCTCTCTATTTGCTTGCAATACCGGCTGTTCGCCTTTAGTTAGAAGTAGAAGTAGAAGGCGCCACGCTGGGGTGCGAAAGCATGGGGATCGAACAGGATTAGATACTCTGGTAGTCCATGTTGTAAACGATGAGTGTTCGCCCTTGGTCTACCTGAGTCAACCATCCACTCTCGAGATTCATATTGATCAATCGATCTCCTCGACTGGGCCAGCATTGATGAAAAAATGACAAAAGAGATCAATTCCATGAGTGGCTGTAAACTGAGAGAAGGCTGATGAGACATATTCCCACCTGAATATTAGTGCAAAACAGGAATCTGATGACAAAAGAATCAATTTGCAACCTTAGCTTTAAAAAGCCGAAAAGAATTGAAGTACCCCCTATCTAGTAAGGTTTGTGTTTATCATTTTACTAAAAAAAATCAGTCATTTAGAATTTCATATTAAAAAAATATGTGACGATTTTTCTTTAAATAAGAGATTGGCCATCGCCCAAAGGCGGCAAAGGTTGAGGTGCATTGATCCGACTACAAAATCTGTATCTCTATATGTCGTTTTCGATGAGGCATCATCATGGTGGTCTTCTAAAAATGTAGTACTCCGGATTCCGGGATGCTAGACTTCCATATGCGGGCACAAGCACCTGAGCAACAAGAGCCTGATATTGTGAGCTTTATCGAGGAATTTTCCATCTCAGTACGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGCCGCCACTTGGGATGATTTTAGGCACGACGTATTCCCTTTGGCTATATAATTGTGCATCCTCACCATTATTGAGAAGTGAAAAGGAAGAGATATAAAGGTGGGGCATCTATCGTAGTTGTGATGACGCAGTTGAGTGTTCATTCGATCCACCACCCGAGGCCAGGCCGATCAAATCAAGACGTTTTTGGGTTCGATCCAGTAAGTAATCCATAAGCATCAAACCGATTGGTCGTAGGTTCGAATCCTACTTGGGGAGATTTGATTCATTCCGAATTAAAGAATTCAGAATGAAATGGTTCGCTTTGACCGTTTAGAGTAGGTAAGACGGATTCGACGGGAAGAAGTGGCATTTGGAAGTGTTGCTGACTTAACATTTAGGTTTCGGCATAACAAAGCTTGCACTGTCTTTTCACACTTAGGCGCATAGCGCGCCATTGGTAATGATTCGACTACACCAGAAATTGGGCTTGAAGCTCTCGCCTTAACAACGAACCGACAGCTAATGGATGTTGGTCACGACTACTACCAAAAAGCTCCAATGAAGATGAATATTTCACATGGAGGAGTGTGCATCTTTATATTGGGTGTTCTTCTGTCGTGTGACCTGTGGCCCACGCCTCTTATTTGTTCAGGGCGGGCGGCGTGAACTTCGATTCGATCCGGGTATTCTATCCCACCGCTGAGATGCTTAGTTGACTCCTTACCCTTGATAGGAAGATGACTTATTCAATAATTCGTGCATAAAGGTAAGGATTGGATGAACTAATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCTAGTGCTGACCACATTGAGAGACACAAAAGCACAGGTAACGCTAGTTGGCGAAGTGGCGTTAAGCATCCCTAGTGGTACGAAAAGAAAGGTCGTGATGATATCATCTACGTCTGTACCGCTCCTCGTGGAGTAGATCTCGCATCCAACCAAGTCTTTAACCAGGGAACGGGAGAATTCCCACTATCGCTGGCAGGCCAGCCGGACCGTGAGCGCGGTTGGAATGGGCTTCCCAAAAAGCCACTTCCATTTTCCCCAACCTATACAAAGGGGCGTAATGAATAGAGATCTCCCGCCAGTTGTCTTCTCTTGCTATCACTTCACTTCGTTCGAGAGATCTTATCTTATCGGATACCTTCAGGATTACTGTAGATGTTAAAATCCCTAAATATTTCATGGTAAGATAGAATTACACTTTGTGGTAGGTCTAGAAAAGGTGCTTGAAACTGTTCACTTTTTAACCAAGGACTGAGCATTTGTGGAATGATTGATGACTCGCAGTGAAGATAATGGTTTTATCAGGCGCCTGTAGATGATTCTGCACTCTCCCAGCAGCATTCGTCCGTCTGAACATTGGGATGAGACAGTAACGAGCAAAAAAGACATTGCACAATGATCCGAACACTTTGTCACATCTCTTCGATATGGATACAGTAACGATCATAACGATCTCCTCTGGTACCTACTGGTACGTCAAGATCCAATTGGTCATGAACATTATAAGGTGCTGCTCTTCATAAATCCCTGCATACCTCTGGTTGGAACGGGTAGGCCCACCACTTCACTTTCACTCAGCATATAGTAACTAGGGGTATGCTGGGACAAAAACTTCAATCTCGGTTAGAGGACCAAGATCATTCATGTGAAATAGCTTACTAAGGTGCTCAGGAATTTCATCTTCGCAAACCTCGTCTCGTTCTTTCCAATCAAAGAACTTTTCCATGCTACATTTTCAATCAAGAAAGTCCTTAGGATGCAATCGGCCATGGAAACTTTGAATGTCCACTTGATCCCACGATCTCGCAATCAGGGAATTAGTTAAAAGAGATATCTAATTGATTTGTCTTTCAATACTGACTCTTTTCCTCTTTCTCATCAAAAAGGTACCTTCGAGCTCAGCTTTGTCATCTAGCTTGGGTTGTTCAAAAAGAAAAAGAGGTTCCAACTAAGAAGAACCGAACTTGAAGGGGGCAGCGCCTCTTGAGCTGCCACCTATTGTTGATCGGGGACCTCCGGCAGCGCTATGCTTCACCGCTTGTGCAGGCCCCTGTCAATTCCTTTGAGTTTTGGTCTTGCGATCGTACTACCCAGGCGGAGTGTTTCACGCGTTAGCTTTGATGAGAAATGCGAGACAAAAAAGGAACTCATCTTTTCGACTGGGAAATGCGAGTCTGTTTTGTCCACTTTCTCCATCCCCCTCTATCAAAATCAAAAAAGGCGAGCTTGCTTCTTATTCCCTTGTTAGATCTCTTCCATCTCTGCCTCGCTCGTTGTCACCTATGTTGAAGAAAGGTTTGGAACCCTGTAGAGAATGAAGAGGGGCCAAGCTTCTCATTCTCTTATAGAAGCATGCGTCCACGCCGGGAACGGGTAAAGCCATGAGAAATAGTAGGGAGCACTGAGCAATGGGGGGGGGGGATGAAGGCGACTCCGTCCATGGGTTGGACCACACCACAAGTGAGAAGGCCCAACACATGGCATCTAAGAGCCACTGTGATCCTGTCCTTCGGAAGCTCTGCCAGTATAGCACAGTGCTCTTCTATTTTGTCTTTCTCTTGATTCGCTAAACACTTCCAATACCTCACCACACCGATTTCACAGCTCTACTTTTTTCGCTGCTTTCACCGCAAGCAAATTCCACCATTTCCCAAGCTTGAATCGCCTTCAATCCATAAACATGTGCAATCCCATCTCCAACTGAGACCACTCGACCAATCTCATCCACTTTAAAATTCGTGTAAAAGTTGGTAATTCGAATTTCTAATAAAGTCGTTAGTTCTGCAGGTATATATATAGGCTTCGTCGAGAATACCAAGTCGATCGGCAACTACTGTACAGGTTTCATTGTTTTTATACGCAATTCGACGATTTCGTTTGTGTTTATGTTGGTGATCTCTGATGTGAATTCGACGGGTTGTCCACCCTTCCTATGGGTTCCCCCACCGACCCAGTAACACACCCTCGATCTTCAAAGAATACGAATTCTCCTACTCCTCCTTCTCCTTTAGGATAGGATCGTCGTTGGTCCTTCTTTCAATAATTATCGAATGAAATCACCATTTTATAGTCGTTCGCGCGAACGCACGAGGGACGAGACTTTCTATCACTTGCGCTTGCTTTTCACAAGCCGTATTGCTGCTGTTGTTTCTATACAAAAATTGTGTGAATTTTGTTAGCGGCAGCTATCCTACATGAGACTTTTTCTTTACTGTAATTTTGCCCCCTTTGAATAATAATAAGGTCAAGTCAAGCTTTTTGAAGCAAGCTGCTAGAAGTAGCAGCCCATCTAAGCCAGCTTTAGCCAGTGATCCATACACTGTCGATCCATACATAGCTTCTATACCTGGGTGACCCAGTCGCATATGCAGTAGCTCCAAATCGATATCCCAACCATGTGATCGAGACCTATACCTAACATACTCCGGTGAATGAGTCGAGAGAGATGGGGAGGCGAGTGGTATAGAGGAAGTATAGTAAACAGTTGAGTGACTATCCAACCATTCAATCGGCTCTCCCTACGCTATTAATGTGAGGACTCCAGTAGCTTTAGGTCTAGCCTCTCAACATCCGTGTCCGATGCAATGAAAGGTTCCTTTGGTCTTGACTTAATTGACAACGGACGGTATTTTATTTTTTTTATAGTGGAAATGCCATAAAGCGCCAACCAAGATCCGTGATACCATATCTCCTTCCCTTTTTCTCGGTCCCCCCTCGGAAAAGCGATATAGTTATTCCCCTCTGAAACTCCGAATCGGAACCAACCACCCCACTCTAGTAATAGGAGAAAGTAAAACGCTCGCTTTCTTCCCACACAGACAATCGATTGTTAATTGTTGGTTGTACTGGTTTTGATTGTTAGGACCAACATCCTTTCCGGTACTTCGAACTTGAATGGACATCATAGTACCCTTGTTGTTCGAGCTAATTCAAAAGCATTTGTAAGCGGCATACGCTTCAAAAGTCGGAATGAAAACAATGAAATATTAGCTTTCGTTCCCCTTTGTTCGAGAAAGCCTGTGCCTAAATCAGCGGCCTAGTCGCCGGGGGCATCCCGAAAACGTCCGAGTCGAAATATGGCTTTCAAATTTAGTTCCAAATTAGTGGATGCTGCCAACAAGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACGTTTTCGTTAATCCATAAACAGGATCTCTCTCGACACATAGGCCCATGGATCCATACATCTCAATCGGAAAAGAATCAATTGAAAAAGAAAGAATCAGAATTTGATTGATCGGAACTGGAGTCTCACGAGGGATTTTGCAGTTCTATGGCTGCATATTCAGTCGAGCACATGTGACTGAGTCGCCCATACCTAAGCTCGAGAAACATTCTTTATACTAACCGGTAATTCATTGAGGTTGATCCCGAAGTTACGGAGCCAAAAATCGACTTGAAATCTTAAAAAAAAAAGTAAAAAAGATTATGTTAAATTTCAGCCTACTAAAGACTACGCTCGGAAAGTCGGTAATCAGCAAGAAGAGAAGAATAAGCAAGAAGAAAAGAGAAGTCCCGAGAAGTACTTCTCAAACCTTTCAACCAGGAGAGCGGCTTTTGCTAAAACTCGAGCAGTTTCTTGA

mRNA sequence

ATGATCGGGACCGGTGCTACTGCAGCAGCCATCAACGACAACAAGTGGCGTCATCGGATGAAGACTAGACCTATTTTTGAGTTAAGCCAGGAGTGTCTTTCTCGAATGAAAACATCAATCATGGTCTGTTCCATAAAGCTGAGCTTTTCGGTTCGCTCCCCTGGCCTTCTTACTGGTAAAGGAAGGGAAATCAACCGAGATCCCGTTAGTAGCTGCGAGCAAGAGCGGATTGGGGGTTTCAAGAAAAACAAACACGAAGCTTCGTTCCTCAGCAAAGGGTTCACTTCTTTTTCGCCAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGCCATGGGTACTCATGCTGATATGAGACCAAAGATACATAAGCATCATGTTACAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCCGACTCGAAATGACCGACTCAAATGGGCGAGGGCTCTCTATTTGCTTGCAATACCGGCTGTTCGCCTTTATACTCCGGATTCCGGGATGCTAGACTTCCATATGCGGGCACAAGCACCTGAGCAACAAGAGCCTGATATTGTGAGCTTTATCGAGGAATTTTCCATCTCAGTACGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGCCGCCACTTGGGATGATTTTAGGCACGACTTGAGTGTTCATTCGATCCACCACCCGAGGCCAGGCCGATCAAATCAAGACGTTTTTGGGTTCGATCCAGTAAGACGGATTCGACGGGAAGAAGTGGCATTTGGAAGTGTTGCTGACTTAACATTTAGTAACGATCATAACGATCTCCTCTGGTACCTACTGGTACGTCAAGATCCAATTGGTCATGAACATTATAAGGTCAAGTCAAGCTTTTTGAAGCAAGCTGCTAGAAGTAGCAGCCCATCTAAGCCAGCTTTAGCCAGTGATCCATACACTGTCGATCCATACATAGCTTCTATACCTGGGACCAACATCCTTTCCGGTACTTCGAACTTGAATGGACATCATAGTACCCTTGTTGTTCGAGCTAATTCAAAAGCATTTCCTACTAAAGACTACGCTCGGAAAGTCGGTAATCAGCAAGAAGAGAAGAATAAGCAAGAAGAAAAGAGAAGTCCCGAGAAGTACTTCTCAAACCTTTCAACCAGGAGAGCGGCTTTTGCTAAAACTCGAGCAGTTTCTTGA

Coding sequence (CDS)

ATGATCGGGACCGGTGCTACTGCAGCAGCCATCAACGACAACAAGTGGCGTCATCGGATGAAGACTAGACCTATTTTTGAGTTAAGCCAGGAGTGTCTTTCTCGAATGAAAACATCAATCATGGTCTGTTCCATAAAGCTGAGCTTTTCGGTTCGCTCCCCTGGCCTTCTTACTGGTAAAGGAAGGGAAATCAACCGAGATCCCGTTAGTAGCTGCGAGCAAGAGCGGATTGGGGGTTTCAAGAAAAACAAACACGAAGCTTCGTTCCTCAGCAAAGGGTTCACTTCTTTTTCGCCAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGCCATGGGTACTCATGCTGATATGAGACCAAAGATACATAAGCATCATGTTACAGATAGGATAAGAGGGCTCTTCAAGAGTCGAGCTATTGTGGTAGTAAAGGCTTCCAACAGTGATAGCTGCCCCCACCAGATGGGCCACCCAAAACCTGGAGCTAACATTTCAATTGGAAATCCACGTCGGATCGCGGCGAGACGAAAAGGGCAGACTGAAGCAGAGGATCACAAAATGCAACACAACAAGGGGCCTCTAAACGATTCCCGTCTCTTAGAAAGAGCCCCTAAACGATCGGACCAGACAGTGGGTACCAAGATTGGTGGTTCGACATTCGACAGTTTTAGTCATAGACACAATATTGCTGATCTCCTCAGCTATGCGAAAGCCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCCGACTCGAAATGACCGACTCAAATGGGCGAGGGCTCTCTATTTGCTTGCAATACCGGCTGTTCGCCTTTATACTCCGGATTCCGGGATGCTAGACTTCCATATGCGGGCACAAGCACCTGAGCAACAAGAGCCTGATATTGTGAGCTTTATCGAGGAATTTTCCATCTCAGTACGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGCCGCCACTTGGGATGATTTTAGGCACGACTTGAGTGTTCATTCGATCCACCACCCGAGGCCAGGCCGATCAAATCAAGACGTTTTTGGGTTCGATCCAGTAAGACGGATTCGACGGGAAGAAGTGGCATTTGGAAGTGTTGCTGACTTAACATTTAGTAACGATCATAACGATCTCCTCTGGTACCTACTGGTACGTCAAGATCCAATTGGTCATGAACATTATAAGGTCAAGTCAAGCTTTTTGAAGCAAGCTGCTAGAAGTAGCAGCCCATCTAAGCCAGCTTTAGCCAGTGATCCATACACTGTCGATCCATACATAGCTTCTATACCTGGGACCAACATCCTTTCCGGTACTTCGAACTTGAATGGACATCATAGTACCCTTGTTGTTCGAGCTAATTCAAAAGCATTTCCTACTAAAGACTACGCTCGGAAAGTCGGTAATCAGCAAGAAGAGAAGAATAAGCAAGAAGAAAAGAGAAGTCCCGAGAAGTACTTCTCAAACCTTTCAACCAGGAGAGCGGCTTTTGCTAAAACTCGAGCAGTTTCTTGA

Protein sequence

MIGTGATAAAINDNKWRHRMKTRPIFELSQECLSRMKTSIMVCSIKLSFSVRSPGLLTGKGREINRDPVSSCEQERIGGFKKNKHEASFLSKGFTSFSPDRIRGLFKSRAIVVVKASNSDSCPHQMGHPKPGANISIGNPRRIAARRKGQTEAEDHKMQHNKGPLNDSRLLERAPKRSDQTVGTKIGGSTFDSFSHRHNIADLLSYAKAMFLHRLAMGTHADMRPKIHKHHVTDRIRGLFKSRAIVVVKASNSDSCPHQMGHPKPGANISIGNPRRIAARRKGQTEAEDHKMQHNKGPLNDSRLLERAPKRSDQTVGTKIGGSTFDSFSHRHNIADLLSYAKAMFLHRLVIPPRSYLFFPTRNDRLKWARALYLLAIPAVRLYTPDSGMLDFHMRAQAPEQQEPDIVSFIEEFSISVRAFQRNSLVATLAATWDDFRHDLSVHSIHHPRPGRSNQDVFGFDPVRRIRREEVAFGSVADLTFSNDHNDLLWYLLVRQDPIGHEHYKVKSSFLKQAARSSSPSKPALASDPYTVDPYIASIPGTNILSGTSNLNGHHSTLVVRANSKAFPTKDYARKVGNQQEEKNKQEEKRSPEKYFSNLSTRRAAFAKTRAVS

Homology

[Close]

BLAST of MC06g_new0340.1 vs. NCBI nr
Match: KAG9157571.1 (hypothetical protein Leryth_022799 [Lithospermum erythrorhizon])

HSP 1 Score: 64.3 bits (155), Expect = 6.60e-09
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 259 QMGHPKPGANISIGNPRRIAARRKGQTEAEDHKMQHNKG 297
           +MG PKPGA+I IGN RR+ A RK QTEAEDHKMQHNKG
Sbjct: 26  RMGRPKPGADIPIGNQRRVPAIRKRQTEAEDHKMQHNKG 64

[Close]

BLAST of MC06g_new0340.1 vs. NCBI nr
Match: KAG8365805.1 (hypothetical protein BUALT_Bualt17G0010000 [Buddleja alternifolia])

HSP 1 Score: 71.6 bits (174), Expect = 1.09e-08
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 60  KGREINRDPVSSCEQERIGGFKKNKHEASFLSKGFTSFSPDRIRGLFKSRAIVV----VK 119
           KGREINRDPVSS E+ERIGG KKNK EASFLSK FT FSP   R + + R +V     ++
Sbjct: 631 KGREINRDPVSSGERERIGGLKKNKDEASFLSKVFTYFSPAE-RSVNRGRFLVTRPGDIR 690

[Close]

BLAST of MC06g_new0340.1 vs. NCBI nr
Match: KAG8362742.1 (hypothetical protein BUALT_BualtUnG0037200 [Buddleja alternifolia])

HSP 1 Score: 71.2 bits (173), Expect = 1.32e-08
Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 60  KGREINRDPVSSCEQERIGGFKKNKHEASFLSKGFTSFSPDR 101
           KGREINRDPVSS E+ERIGG KKNK EASFLSK FT FSP R
Sbjct: 61  KGREINRDPVSSGERERIGGLKKNKDEASFLSKVFTYFSPAR 102

[Close]

BLAST of MC06g_new0340.1 vs. NCBI nr
Match: KAF3945961.1 (hypothetical protein CMV_027718 [Castanea mollissima])

HSP 1 Score: 61.6 bits (148), Expect = 3.15e-07
Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 260 MGHPKPGANISIGNPRRIAARRKGQTEAEDHKMQ-HNKG 297
           MG PKPGA+ISIGN RRI A RK QTEAEDHKMQ HNKG
Sbjct: 1   MGRPKPGADISIGNQRRIPAIRKTQTEAEDHKMQQHNKG 39

[Close]

BLAST of MC06g_new0340.1 vs. NCBI nr
Match: WP_131796644.1 (hypothetical protein [Candidatus Frankia datiscae])

HSP 1 Score: 59.7 bits (143), Expect = 1.51e-06
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 219 THADMRPKIHKHHVTDRIRGLFKSRAIVVVKASNSDSCPH 258
           THADMRP+I KHHV DRIRG+F+S AIVVVK S+ +S  H
Sbjct: 17  THADMRPEIEKHHVKDRIRGVFESLAIVVVKESHEESGDH 56

[Close]

BLAST of MC06g_new0340.1 vs. ExPASy TrEMBL
Match: A0A6S7KR38 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS1270 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.28e-05
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 260 MGHPKPGANISIGNPRRIAARRKGQTEAEDHKMQHNKG 297
           MG PKPGA+I IGN RR  A R+ QTEAE+ KMQHNKG
Sbjct: 1   MGRPKPGADIEIGNQRRTPAIRRRQTEAEEQKMQHNKG 38

[Close]

BLAST of MC06g_new0340.1 vs. TAIR 10
Match: AT1G72970.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 5.4e-04
Identity = 22/53 (41.51%), Postives = 27/53 (50.94%), Query Frame = 0


Query: 313 DQTVGTKIGGSTFDSFSHRHNIADLLSYAKAMFLHRLVIPPRSYLFFPTRNDR 366
           D   GTKIGG+ FD F  RH  A+LL+YA    L  L+      + F T   R
Sbjct: 209 DHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYATVQKIVFDTSGTR 261

[Close]

BLAST of MC06g_new0340.1 vs. TAIR 10
Match: AT1G72970.2 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 5.4e-04
Identity = 22/53 (41.51%), Postives = 27/53 (50.94%), Query Frame = 0


Query: 313 DQTVGTKIGGSTFDSFSHRHNIADLLSYAKAMFLHRLVIPPRSYLFFPTRNDR 366
           D   GTKIGG+ FD F  RH  A+LL+YA    L  L+      + F T   R
Sbjct: 209 DHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYATVQKIVFDTSGTR 261

The following BLAST results are available for this feature:

BLAST of MC06g_new0340.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG9157571.1	6.60e-09	76.92	hypothetical protein Leryth_022799 [Lithospermum erythrorhizon]	[more]
KAG8365805.1	1.09e-08	60.00	hypothetical protein BUALT_Bualt17G0010000 [Buddleja alternifolia]	[more]
KAG8362742.1	1.32e-08	83.33	hypothetical protein BUALT_BualtUnG0037200 [Buddleja alternifolia]	[more]
KAF3945961.1	3.15e-07	82.05	hypothetical protein CMV_027718 [Castanea mollissima]	[more]
WP_131796644.1	1.51e-06	70.00	hypothetical protein [Candidatus Frankia datiscae]	[more]

BLAST of MC06g_new0340.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6S7KR38	2.28e-05	71.05	Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS1270 PE=4 SV=1	[more]

BLAST of MC06g_new0340.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72970.1	5.4e-04	41.51	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]
AT1G72970.2	5.4e-04	41.51	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 569..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..600
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC06g_new0340	MC06g_new0340	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15454464..15454604	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15455166..15455244	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15455757..15455863	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15457600..15457669	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15458746..15458804	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15458926..15458994	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15459096..15459264	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15459824..15460025	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15460434..15460734	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15460951..15461051	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15461460..15461705	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15461939..15462061	CDS
MC06g_new0340.1-cds	MC06g_new0340.1-cds-MC06:15462152..15462326	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC06g_new0340.1	MC06g_new0340.1-protein	polypeptide