MC06g1511.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1511.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	histone H1
Location	MC06: 22419526 .. 22424200 (+)
Sequence length	1953
RNA-Seq Expression	MC06g1511.1
Synteny	MC06g1511.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATTTCTCAATAGAATGACATGAAAAAATATTCATTGGAAAGCTAATGTAATGAGCTACCAAATGAAAAAAATCCTACTTAAATCTATCTAGTGTAGCTCAAATTATGCCCATATTAATCAAGCTTAAAAGCACACCCAATTCTTCATGTACATACTTCCCCTTCCAAAACTCCTCCATCAATGCCACCCAAATCAAGCGCTATCAGCCGTCGATGGCGTTTGATCGAACGGCTGGAATTTAAACTTGGAAAAGGTAGCGATCCGCGTGATAGGCGTATTTACCAATCAGATTTCAGCTTCCTTGTGTTGAACATGACATGCCGACTATTTAAGCCTAAACATTTTATTCATTTACTCGCAACGAAATTACCAGTAAGATACAGCTGCTCTCTCTTCTCTCTAGATCGCAATTTCATTTCGGTAATCTTCCCTTCCAATTTAATTCTTCTGTTCGTAAACCCTAATTCTACTTTTGGGTTGTGGAATCCGGTCTCGTGTTTACTCTAATGGCTACTGAGGAACCGGTCGTACCGGTGGAGTCTGCTGCGGAGCCGACCAGCGCCGAAGCAGCAGAAGAGAACCCGCCGAACAAGGCTGCCAAGTCGAAGAAGTCTAAAGAGCCTAAAGAGAAGAAGCCTGCTGCTCCTCGAAAACCTAGAAATCCTCCAACTCATCCTCCCTATGAAGAGGTGTGCTGCTGAATTGAATTCGGATTGTCGAACTGAATTTTATGTTGTTTAATTGGTTTTTGGTTGTTGGATCTGTTGTGTTGATTTGGTTTGGTTGTTTTGGTTTTCAGATGATTAACGATGCGATTGTCACGTTGAAGGAGAGGACAGGTTCGAGTCAGTATGCGATCACGAAATTCATCGAGGAGAAGCAGAAGCACCTTCCTTCAAATTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAACTTGTAGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAGCCGGCGAAGTCAGCAGTTGTAAAACCCCCTTCACCTGCGAAGAAGAAGCCAGCAGCTGCCAAGCCGAAACCCAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCAGCGAAGCCAAAGCCTAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCAAAACCTGCTCCAGCCAAATCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGAACGTCGACGAGAACCTCACCGGGGAGGCGGGCACCGGCTCCGAAACCGGCGCCGAAGAAAGCACCGGCGGCTAAAAAGGCCCCGGCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCCGGCGAAGAAGGCTCCGGCCAAAAGAGGGAAGAAGTAAAGGGGGTAGGAGGAACATAGCATTTGTAGCGGTCCTGTAAATCCGTTATCCGTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTTTTAATTTGAGACTTCAAATTTTCTTTTATTTGTTTATTTGTAGAAGGCGACCTTTTCTCCCCCAAGATGATGTATCGCTCAGCTTAGTTTTTAATGGATAAATTCTGTGATCAATTAGGAGCGTCGAAACAGTTCTCACCCTGTGATCTCCACGGCCAATACGAACGGCATCAATTACCAGGAAACTTTTCGTTTCTCGTACGCTAGAATTGGATATGGATTGGGTAACTGAAGTTTGAAGCTTCGTTTTTAAGCTTGGTAAATCTCAATCTTTCTCTGTACTTCTCGCCCCAACTTTCTCTTGTGTGGTTCCAATTTCAACTAATTTATGTCTAAACAATGAATAATTATTATAGGTAGAATTAATTGATTAGCTAGCTATATATGATCTCTTATTATATACTTCATTATTTGGGCATAGGATTAGCATCCTTTTCGTAATGAATGGTAATGGTATAATGTACAAATGTTTGCTTTGTTTCCTGCCTATGTAGATTGTTAGCCTTTTAGGGCGTTGGTAGGATGTATTGGGTTTTATATAACTGGGTTAAGAAGTCGTTTGAAACACAATTGTTGAAGGATGCTAGATACCGTTTCAAAAGTATTAAGGTTAGGAAGCTTGCTTTAGATTAATTTGAATGTGTGTTAGTTGTGGGTTTATGTTCTGTAAATGCTACTTTTTTATGGTATAAATGGTGATGTAGATTAATCTAATTTATGGGACTAGGTTTATGTCTAGTTTATGAGATTAATGTACACAAATGTGTTGTGTGAACCAAACGTACTCCTTATATTACATTCTAACTCTTATATATCATAAACTAAAAAACCAAACACAACTAACGTGTCAGTAAAATATATACTTATGGTACATACTAACTCATAAACCATGTTTATATGCTCTCTTATAAAATTCAAATATTGATTGCACAAATTTAGATTTTCAATTCTAGACTTCATAAACTCATGCTTATTGATATCTTTGGAATCATCTGTTCAGGTTTATGTTTTTTGCCCCTAGGACTTAATGTTAGGAGATTTGTTGGGTTTAAATCGACTGATAGTGGTTATCAGTAGGGAAAACTATTGAAAGGGAAATTATCCTTTTAGTAACAGATTCGTAAAATACATTAGAGGGGGAAATCCTATGGAATATGGCTTATTTATAGAAGGAAGGTATTGAGGAGAACAAATGTAGTAGGAAATCAGAAGGAATTGACGATGGGTGGAGAATCCTGCTGTATATTCTAGCTAGCTCGAATTTCTTTAATTCAAGTATTAGGAGAGCAAGTCTGTTATTATGGTGGAGAACCATTTACCAAAATGAGAACCATTTACCAAAATTTTCTATCTTTCCTATCTCATCGAATTCCAAATTGTTGTTTGAGACCTCTTCTAGAGGGTGTTTCCGGAATTAAGAAATTAAATCTATATTTGATACCTCAAGTTTCTTTAATTCAATAAATTTGGTATATGGGTGGAGAAACCATTTAGCCATTTTGTCTACCTTCCCTATCTCATTAATTCCAAATGGTTGTTCTGGACGTTCTTTAGAGGGTGTTTGATTCGTGTAATTTGGAATTAAGAAATTAAATCTATGTTTGAATTTTGAGTATGTTTATCTTCAACTATAAATAGGCTTGCTTAAATCTAGACTTACTGAATACATCTTTTATGATACACATCCACCTCTACTAATCCTGAGTTACTATAATTCAATTCATTTGCACCATCTAACTTTCCAACCTTTGACATCAGAAGCCAGTATTAAAATCATGGACTGAACCGAACTTCCTCTTGCTAAGTCAATCGTTAATTGGTTCCATGTTGAGACAAATGATGTGCAAACTAGACTACTCTGAAACCTCTTTAAATAAAGTCAGTCTAGTCAAAATTTAGTCCTACCATCCTACGACCATGGATATGGAAAATGCCAATGCGTGGCCCTATGGTTACAGTTGACTTTTATGGCAATATCATCCATCAATTTTAGTTTCTTATTAGCACTTCTTTTTATCCTATAGATCTCACTGTGTTAGCTTATACTAATCAGCATCTATTAAAGTTGTTAGCAACGGATGATCTCACGATTTGAATGTCTAGCTTGCAGCTTCGAAAGGCTCCTTGTCTTCAGTAGTTTATTGTTGGTCTGCCTTTGCGATCTTGATCGATCTAGATTTCAGCTTTGGCCCTTTTAGACATTTTACAGGACAATAAGGCTTCTTTGGAACCATACTTCTTGATATCCAGTGCACTAGGTAATTAAAAATACTATCAGTTTGGTCATGTTTCTGGATATAAATCAGCGCCACCTAGTAGAATTAGGATATTATCAGGTTGGCGACGAGAGATTAATTAGATAACTCATGGTCACTTTTATGAGGATAGTATGAGGCAGTGGTTCTACCACTGGAAGAAGAGCATGGTAGAAACTAGAAAGATGCGGTTAATTTGGCTAATCCACTAGGAATGCTTATGTAAGATCGATCTTCTCAGAGTCGTGCAAGTCATTTAGGCTTTAGGACCTCGGCTTAATTTGGTACAGTTATTTGAATGTTGTCCTCTTAGCTACGATGGGGTGTTTTAAAGTAATGAAATCGTTTCAGCTTGCATCAACCTTAACCAGTCTGCTCCCTCCCTCACCATTTCCTCATCTCCCTTCATTTCCAGTGATGTGCAGACATGTGCAGCTGCATTATCTTATATGTTGCCACCATTTGTAACTTGTTTATATCTCATCCTTGTGTGTCTGCATGTTACGTGGAATCTGAATAAATTGACCATTTCTTATTTTGCCACTATTTGGTAAATAATAGAGGATATGTATTTTGTTGGATAACAAATGATAGTTTGAATTTCTCTTTATCAAGGTCTACAGAATTTTTTCGTCAGCTGTACATTTATGACTTTCTGGCATCCTCCCTATTGGCAAGTGGCAACTGTATCTATTTCTCTTGCATGGCCTTCAGCTCTTTTAATTTAAACATCTTGCTAGTACTTCTCCTCAACTGTTCTTATTTTCCTTCTCGACAAGCTGGTTTATCCATGAAAAGAAGCGTAAGTTCAAATTATAATTGAATTGATTCCATATAGTTGAGCTGATTCCATAGTTGTCCATCAGCTTGAGCTAGCGTGGGATCCTG

mRNA sequence

TGAATTTCTCAATAGAATGACATGAAAAAATATTCATTGGAAAGCTAATGTAATGAGCTACCAAATGAAAAAAATCCTACTTAAATCTATCTAGTGTAGCTCAAATTATGCCCATATTAATCAAGCTTAAAAGCACACCCAATTCTTCATGTACATACTTCCCCTTCCAAAACTCCTCCATCAATGCCACCCAAATCAAGCGCTATCAGCCGTCGATGGCGTTTGATCGAACGGCTGGAATTTAAACTTGGAAAAGGTAGCGATCCGCGTGATAGGCGTATTTACCAATCAGATTTCAGCTTCCTTGTGTTGAACATGACATGCCGACTATTTAAGCCTAAACATTTTATTCATTTACTCGCAACGAAATTACCAGTAAGATACAGCTGCTCTCTCTTCTCTCTAGATCGCAATTTCATTTCGGTAATCTTCCCTTCCAATTTAATTCTTCTGTTCGTAAACCCTAATTCTACTTTTGGGTTGTGGAATCCGGTCTCGTGTTTACTCTAATGGCTACTGAGGAACCGGTCGTACCGGTGGAGTCTGCTGCGGAGCCGACCAGCGCCGAAGCAGCAGAAGAGAACCCGCCGAACAAGGCTGCCAAGTCGAAGAAGTCTAAAGAGCCTAAAGAGAAGAAGCCTGCTGCTCCTCGAAAACCTAGAAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAACGATGCGATTGTCACGTTGAAGGAGAGGACAGGTTCGAGTCAGTATGCGATCACGAAATTCATCGAGGAGAAGCAGAAGCACCTTCCTTCAAATTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAACTTGTAGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAGCCGGCGAAGTCAGCAGTTGTAAAACCCCCTTCACCTGCGAAGAAGAAGCCAGCAGCTGCCAAGCCGAAACCCAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCAGCGAAGCCAAAGCCTAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCAAAACCTGCTCCAGCCAAATCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGAACGTCGACGAGAACCTCACCGGGGAGGCGGGCACCGGCTCCGAAACCGGCGCCGAAGAAAGCACCGGCGGCTAAAAAGGCCCCGGCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCCGGCGAAGAAGGCTCCGGCCAAAAGAGGGAAGAAGTAAAGGGGGTAGGAGGAACATAGCATTTGTAGCGGTCCTGTAAATCCGTTATCCGTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTTTTAATTTGAGACTTCAAATTTTCTTTTATTTGTTTATTTGTAGAAGGCGACCTTTTCTCCCCCAAGATGATGTATCGCTCAGCTTAGTTTTTAATGGATAAATTCTGTGATCAATTAGGAGCGTCGAAACAGTTCTCACCCTGTGATCTCCACGGCCAATACGAACGGCATCAATTACCAGGAAACTTTTCGTTTCTCGTACGCTAGAATTGGATATGGATTGGGTAACTGAAGTTTGAAGCTTCGTTTTTAAGCTTGGTCTACAGAATTTTTTCGTCAGCTGTACATTTATGACTTTCTGGCATCCTCCCTATTGGCAAGTGGCAACTGTATCTATTTCTCTTGCATGGCCTTCAGCTCTTTTAATTTAAACATCTTGCTAGTACTTCTCCTCAACTGTTCTTATTTTCCTTCTCGACAAGCTGGTTTATCCATGAAAAGAAGCGTAAGTTCAAATTATAATTGAATTGATTCCATATAGTTGAGCTGATTCCATAGTTGTCCATCAGCTTGAGCTAGCGTGGGATCCTG

Coding sequence (CDS)

ATGGCTACTGAGGAACCGGTCGTACCGGTGGAGTCTGCTGCGGAGCCGACCAGCGCCGAAGCAGCAGAAGAGAACCCGCCGAACAAGGCTGCCAAGTCGAAGAAGTCTAAAGAGCCTAAAGAGAAGAAGCCTGCTGCTCCTCGAAAACCTAGAAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAACGATGCGATTGTCACGTTGAAGGAGAGGACAGGTTCGAGTCAGTATGCGATCACGAAATTCATCGAGGAGAAGCAGAAGCACCTTCCTTCAAATTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAACTTGTAGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAGCCGGCGAAGTCAGCAGTTGTAAAACCCCCTTCACCTGCGAAGAAGAAGCCAGCAGCTGCCAAGCCGAAACCCAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCAGCGAAGCCAAAGCCTAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCAAAACCTGCTCCAGCCAAATCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGAACGTCGACGAGAACCTCACCGGGGAGGCGGGCACCGGCTCCGAAACCGGCGCCGAAGAAAGCACCGGCGGCTAAAAAGGCCCCGGCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCCGGCGAAGAAGGCTCCGGCCAAAAGAGGGAAGAAGTAA

Protein sequence

MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

Homology

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BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.0e-49
Identity = 182/300 (60.67%), Postives = 198/300 (66.00%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAA--EENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPP 60
           MATEEPV+  E   E  + E    E NPP K+ K+K  KE K KKPAAPRK    PTHPP
Sbjct: 1   MATEEPVIVNEVVEEQAAPETVKDEANPPAKSGKAK--KETKAKKPAAPRKRSATPTHPP 60

Query: 61  YEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKS 120
           Y EMI DAIVTLKERTGSSQ+AITKFIEEKQK LPSNFKKLLL  LKK VAS KLVKVK+
Sbjct: 61  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKN 120

Query: 121 SFKL----KPAKSAVVKPPSPAKKKPAAAK----PKPKAAAKTKAVAKSPAKPKAAAKP- 180
           S+KL    KPA +AV     PAKKKPAAAK     KPKAA K KA   + AKP A AKP 
Sbjct: 121 SYKLPSGSKPAAAAV-----PAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAKPAAKAKPA 180

Query: 181 -------KPKTAAKPKAAPKPKP-APAKSKSSAVAKPKAATKTKAAP-------KP--KA 240
                  K K AAK K A K KP A AK K++A AKPKAA K KAAP       KP  KA
Sbjct: 181 AKAKPAAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKA 240

Query: 241 KEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           K   AKVA+T+TRT+P R+A     APK  P AKK P K   AK VKSPAKKA  KRG+K
Sbjct: 241 KTTTAKVAKTATRTTPSRKA-----APKATP-AKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46
Identity = 161/280 (57.50%), Postives = 183/280 (65.36%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEP--------TSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRN 60
           MATEEP+V VE+  EP        T  E  E+  P   A+ +K+K+ K  KP    KPRN
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPK--AEVEKTKKAKGSKPKKASKPRN 60

Query: 61  PPTHPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGK 120
           P +HP YEEMI DAIV+LKE+ GSSQYAI KFIEEKQK LP+NFKKLLL +LKK VASGK
Sbjct: 61  PASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGK 120

Query: 121 LVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAV-AKSPAKPKAAAKPKP 180
           L+KVK SFKL           S A KKPA AKPK K AAK K+V AK  AKPKA A  KP
Sbjct: 121 LIKVKGSFKL-----------SAAAKKPAVAKPKAKTAAKAKSVKAKPAAKPKAKAVVKP 180

Query: 181 KTAAKPKA-APKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGR 240
           K A+K KA A KPK A AK K+ A      A K KA  KPK+K KPAKVA+TS +T+PG+
Sbjct: 181 KVASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPGK 240

Query: 241 RAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRG 271
           +  A K       AAKK P KSVKAK VKSP KK   KRG
Sbjct: 241 KVAAVKKV-----AAKKVPVKSVKAKSVKSPVKKVSVKRG 262

[Close]

BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.5e-40
Identity = 161/286 (56.29%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMI DAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KP +P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRT 240
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           SPG++  AP    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot
Match: P26568 (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.5e-31
Identity = 138/264 (52.27%), Postives = 159/264 (60.23%), Query Frame = 0


Query: 12  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMINDAIVTL 71
           +A  P +  A E+ P  K  K+K  KE KEKK  AA  K R   +HP YEEMI DAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K LP  F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
             P  A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAA 251
           P  +         AATK KA   KPKAK +PAK A+T+  TSP ++A A           
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATK 256

Query: 252 KKAPAKS-VKAKKVKSPAKKAPAK 269
           KK P K  VK K VKSPAK+A ++
Sbjct: 257 KKTPVKKVVKPKTVKSPAKRASSR 271

[Close]

BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-30
Identity = 138/259 (53.28%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 3   TEEPVVPVESAAE-PTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEE 62
           TE P   V++A E P  A AA     N AAK+KK+  PK+         R  PTH PY E
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADAN-AAKAKKATAPKK---------RASPTHLPYAE 65

Query: 63  MINDAIVTLKERTGSSQYAITKFIEEKQK-HLPSNFKKLLLFHLKKLVASGKLVKVKSSF 122
           M+++AI +LKERTGSS YAI KF+E+K K  LP NF+KLL   LKKLVA GKL KVK+S+
Sbjct: 66  MVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSY 125

Query: 123 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 182
           KL  A     KP + A KKP     KPKAAAK K  AK+PAK K A KPKP  AAKPKA 
Sbjct: 126 KLSSATKPNPKPKA-APKKPKTGAKKPKAAAKPK--AKTPAKAKPATKPKP--AAKPKAV 185

Query: 183 PKPK-PAPAKSKSSAVAKPKAATKTKAAPKPKAKEK-PAKVARTSTRTSPGRRAPAPKPA 242
            KPK PA  K+K +A AKPK A    A PKP AK+   AK A+TS + +PG++APA K A
Sbjct: 186 VKPKTPAKPKAKPAAKAKPKTA---GAKPKPLAKKAGRAKAAKTSAKDTPGKKAPAKKAA 245

Query: 243 PKKAPAAKKAPAKSVKAKK 258
           P K  A     A S KAKK
Sbjct: 246 PSKKAATPVRKAPSRKAKK 246

[Close]

BLAST of MC06g1511.1 vs. NCBI nr
Match: XP_022145924.1 (histone H1 [Momordica charantia])

HSP 1 Score: 447 bits (1149), Expect = 1.13e-156
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of MC06g1511.1 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 402 bits (1034), Expect = 3.95e-139
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1034), Expect = 8.02e-138
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. NCBI nr
Match: XP_004140078.1 (histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumis sativus])

HSP 1 Score: 387 bits (994), Expect = 4.84e-133
Identity = 242/272 (88.97%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. NCBI nr
Match: XP_038888055.1 (histone H1-like [Benincasa hispida])

HSP 1 Score: 386 bits (992), Expect = 9.08e-133
Identity = 243/272 (89.34%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEP + E AEENP NKAAKSKKSKEPKEKKPAA +K RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPDNVEQAEENPANKAAKSKKSKEPKEKKPAARKKTRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEK+K LP NFKK+LLFHLKKLVASGKLVKVK+SF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKEKQLPPNFKKILLFHLKKLVASGKLVKVKNSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSA+VKP +PAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAIVKPAAPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPKPA AKSKSSAVAKPKAA KTKAAPKPKAKEKPAKVARTSTRTSPGR+APAPKPA K
Sbjct: 181 PKPKPATAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPAVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KA A KKAPAKSVKAKKVKSPAKKA AKRG+K
Sbjct: 241 KAQATKKAPAKSVKAKKVKSPAKKALAKRGRK 272

[Close]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL
Match: A0A6J1CWP2 (histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 5.49e-157
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 1.91e-139
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 3.88e-138
Identity = 251/272 (92.28%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 387 bits (994), Expect = 2.34e-133
Identity = 242/272 (88.97%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272

[Close]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL
Match: A0A6J1ES19 (histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1)

HSP 1 Score: 384 bits (985), Expect = 4.93e-132
Identity = 243/272 (89.34%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NKAAKSKKSK+PKEKKPAA RK RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYE 60

Query: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLK AKSA+VKP SPAK+ PAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKSAKSAIVKPASPAKR-PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240
            KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAK +RTSTRTSPG++APAPKPA K
Sbjct: 181 AKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVK 240

Query: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272
           KAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Sbjct: 241 KAPASKKAPAKSVPAKKVKSPARKAPARRAKK 271

[Close]

BLAST of MC06g1511.1 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41
Identity = 161/286 (56.29%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMI DAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KP +P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRT 240
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           SPG++  AP    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of MC06g1511.1 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 135.6 bits (340), Expect = 6.1e-32
Identity = 138/264 (52.27%), Postives = 159/264 (60.23%), Query Frame = 0


Query: 12  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMINDAIVTL 71
           +A  P +  A E+ P  K  K+K  KE KEKK  AA  K R   +HP YEEMI DAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K LP  F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
             P  A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAA 251
           P  +         AATK KA   KPKAK +PAK A+T+  TSP ++A A           
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATK 256

Query: 252 KKAPAKS-VKAKKVKSPAKKAPAK 269
           KK P K  VK K VKSPAK+A ++
Sbjct: 257 KKTPVKKVVKPKTVKSPAKRASSR 271

[Close]

BLAST of MC06g1511.1 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-28
Identity = 125/278 (44.96%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMI DAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTA 180
           KVK+SFK+  A+SA                                              
Sbjct: 121 KVKASFKIPSARSA---------------------------------------------- 180

Query: 181 AKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPA 240
               A PKP  AP K K++ VAKPKA                   +RTSTRTSPG++  A
Sbjct: 181 ----ATPKP-AAPVKKKATVVAKPKA-------------------SRTSTRTSPGKKVAA 202

Query: 241 PKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 273
           P    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Sbjct: 241 P---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 202

[Close]

BLAST of MC06g1511.1 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-09
Identity = 65/168 (38.69%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 42  KKPAAPRKPRNP--PTHPPYEEMINDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKK 101
           KK  A +KPR P   THPPY +MI +A++ LKE+ GSS YAI K IEEK K  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAK 161
            L   LK  VA GKLVK+++S+KL      + +      KK    + K +   +T++ + 
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSST 127

Query: 162 SPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA 207
            P K  +  K + K   K    P       KS  S+V K KA   + A
Sbjct: 128 RPKKTVSVNKQEKKRKVKKARQP-------KSIKSSVGKKKAMKASAA 167

[Close]

BLAST of MC06g1511.1 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 43.5 bits (101), Expect = 3.1e-04
Identity = 53/146 (36.30%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 62  MINDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKKLLLFHLKKLVASGKLVKVKSSF 121
           MI +A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 181
           KL      + +      KK    + K +   +T++ +  P K  +  K + K   K    
Sbjct: 61  KLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQ 120

Query: 182 PKPKPAPAKSKSSAVAKPKAATKTKA 207
           P       KS  S+V K KA   + A
Sbjct: 121 P-------KSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of MC06g1511.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	7.0e-49	60.67	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P08283	1.4e-46	57.50	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P26569	3.5e-40	56.29	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P26568	8.5e-31	52.27	Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1	[more]
P23444	7.2e-30	53.28	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of MC06g1511.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145924.1	1.13e-156	100.00	histone H1 [Momordica charantia]	[more]
XP_008449373.1	3.95e-139	92.28	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	8.02e-138	92.28	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_004140078.1	4.84e-133	88.97	histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumi...	[more]
XP_038888055.1	9.08e-133	89.34	histone H1-like [Benincasa hispida]	[more]

BLAST of MC06g1511.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWP2	5.49e-157	100.00	histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1	[more]
A0A1S3BL93	1.91e-139	92.28	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A5A7UQL0	3.88e-138	92.28	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A0A0KDR2	2.34e-133	88.97	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]
A0A6J1ES19	4.93e-132	89.34	histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1	[more]

BLAST of MC06g1511.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	2.5e-41	56.29	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	6.1e-32	52.27	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	2.4e-28	44.96	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	5.5e-09	38.69	histone H1-3	[more]
AT2G18050.2	3.1e-04	36.30	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 194..213 score: 25.0 coord: 42..63 score: 37.37 coord: 142..156 score: 33.33 coord: 172..189 score: 53.09 coord: 69..86 score: 43.21
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 1.1E-33 score: 127.9
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 1.1E-18 score: 67.3
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 29.976166
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..129 e-value: 3.6673E-18 score: 75.3503
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..129 e-value: 7.0E-22 score: 79.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..272
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..272
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC06g1511	MC06g1511	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g1511.1-utr5	MC06g1511.1-utr5-MC06:22419526..22420034	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g1511.1-cds	MC06g1511.1-cds-MC06:22420035..22420217	CDS
MC06g1511.1-cds	MC06g1511.1-cds-MC06:22420328..22420963	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g1511.1-utr3	MC06g1511.1-utr3-MC06:22420964..22421315	utr3
MC06g1511.1-utr3	MC06g1511.1-utr3-MC06:22423928..22424200	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC06g1511.1	MC06g1511.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding