MC06g0603.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0603.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosomal protein
Location	MC06: 4936912 .. 4937852 (-)
Sequence length	300
RNA-Seq Expression	MC06g0603.1
Synteny	MC06g0603.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGTGAATTCTGTAGGACAGTAAAGCGCCGGGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATTTGCAAGTGAAGGCCCTTCTCCTCCCTTGTAAGTACTTTCTGTTCCTTTTGATCTGGGCGTTGTCAGTCATTAGTCTTTGAATGCACATTTTATCCATTTAAGTAATCTGTTAAGACTTTTGAAGTCGTCAAAACGTGAATAAATCGGTGGAAAACTCTGAAAGAGTTATGCTTTTTGCCACTAAAGAGAATTGTTGCATAACTGAAGGTAAGGATTGGAATTTGTTACTTGAGGGGTAGTTGTATAAATGTGGTTTGAGTTGATGTTAAACAGAGTTCTGAACTCATACATGTAAAATTGTAGAATTTCTGCAATTCCTTCAGTATCGAGAAAAGTATGTGTCTTTTCTTTGTTTTTGTTTAAAGAAGAATATGCTGAAAAAGGAAGGGTCAAATTCCTGGAAAGAATGAAAACTCCGAGCTTCTTGGTTCCATATACTTTTCACTGAGAAGTCTTCTTCCATCCTCAATGAGTTCCTTACACTTTTCACTGGGAAGTCTTCTTCCATTCTCTATGAAGGAGCTAGAGATTTATTTTGGGGATTGTTGGATGCTGTTTTTCCATTTTCATGATTAATATCCATGTATGATATGATGGTATGCAGGCTTTACTTGGGATTAACCACATGATTCTTGTAGCTAGATGATTTAACTTGACCCGTTTTTCAGGTTCTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTTATAGCCCGCGAACAGGGCTGGCTTCTCTCATCCCCCAAAAGCACGAGCCAACTACAATGTTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAAT

mRNA sequence

ATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGTGAATTCTGTAGGACAGTAAAGCGCCGGGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATTTGCAAGTGAAGGCCCTTCTCCTCCCTTGTTCTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTTATAGCCCGCGAACAGGGCTGGCTTCTCTCATCCCCCAAAAGCACGAGCCAACTACAATGTTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAAT

Coding sequence (CDS)

ATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGTGAATTCTGTAGGACAGTAAAGCGCCGGGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATTTGCAAGTGAAGGCCCTTCTCCTCCCTTGTTCTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTTATAGCCCGCGAACAGGGCTGGCTTCTCTCATCCCCCAAAAGCACGAGCCAACTACAATGTTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAAT

Protein sequence

MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

Homology

[Close]

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot
Match: P73300 (50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR+SVKKMC+ CR ++RRGRV V CS+NPKHKQRQG
Sbjct: 1  MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38

[Close]

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot
Match: A5VLI2 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-10
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot
Match: B2G8V5 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-10
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot
Match: B3WAJ5 (50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-10
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot
Match: Q035A6 (50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) OX=321967 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-10
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of MC06g0603.1 vs. NCBI nr
Match: XP_022144930.1 (uncharacterized protein LOC111014487 [Momordica charantia])

HSP 1 Score: 202 bits (515), Expect = 1.23e-65
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
Sbjct: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100

[Close]

BLAST of MC06g0603.1 vs. NCBI nr
Match: XP_038879717.1 (uncharacterized protein LOC120071478 [Benincasa hispida])

HSP 1 Score: 182 bits (461), Expect = 2.13e-57
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGP P LFSRSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPPPSLFSRSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           +LPS+S RTGLASLIPQKHEPT + GWRMGLASILLKK N
Sbjct: 61  LLPSHSSRTGLASLIPQKHEPTMLLGWRMGLASILLKKRN 100

[Close]

BLAST of MC06g0603.1 vs. NCBI nr
Match: XP_022987917.1 (uncharacterized protein LOC111485318 [Cucurbita maxima])

HSP 1 Score: 181 bits (460), Expect = 3.03e-57
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST ASEGPSP LF  SEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS+S RTGLASL+PQKHEPT +FGWRMGLASILLKKHN
Sbjct: 61  ILPSHSSRTGLASLLPQKHEPTMLFGWRMGLASILLKKHN 100

[Close]

BLAST of MC06g0603.1 vs. NCBI nr
Match: XP_022933442.1 (uncharacterized protein LOC111440855 [Cucurbita moschata] >XP_023531008.1 uncharacterized protein LOC111793393 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (455), Expect = 1.75e-56
Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLSTFASE PSP LFSRSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVRRRGRVYIYCSANPKHKQRQGLSTFASEAPSPSLFSRSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Sbjct: 61  ILPSHSSRTGLASLIPQKHEPTMLFGWRMGLASILWKKQN 100

[Close]

BLAST of MC06g0603.1 vs. NCBI nr
Match: XP_004150587.2 (uncharacterized protein LOC101223220 [Cucumis sativus] >KGN65627.2 hypothetical protein Csa_020116 [Cucumis sativus])

HSP 1 Score: 181 bits (458), Expect = 2.40e-56
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSP LFSR+EVKQE
Sbjct: 44  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQE 103

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS S RTGLASLIPQK+EPT   GWRMGLASILLKKHN
Sbjct: 104 ILPSQSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN 143

[Close]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL
Match: A0A6J1CT08 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111014487 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 5.95e-66
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
Sbjct: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100

[Close]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL
Match: A0A6J1JBN8 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111485318 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 1.47e-57
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST ASEGPSP LF  SEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS+S RTGLASL+PQKHEPT +FGWRMGLASILLKKHN
Sbjct: 61  ILPSHSSRTGLASLLPQKHEPTMLFGWRMGLASILLKKHN 100

[Close]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL
Match: A0A6J1EZS5 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111440855 PE=3 SV=1)

HSP 1 Score: 179 bits (455), Expect = 8.48e-57
Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLSTFASE PSP LFSRSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVRRRGRVYIYCSANPKHKQRQGLSTFASEAPSPSLFSRSEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Sbjct: 61  ILPSHSSRTGLASLIPQKHEPTMLFGWRMGLASILWKKQN 100

[Close]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL
Match: A0A6J1I4R0 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111470644 PE=3 SV=1)

HSP 1 Score: 178 bits (451), Expect = 3.46e-56
Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVR+SVKKMCEFCRTV+RRGRVY+YCSSNPKHKQRQGLSTFASE PSP LFSRSEVK++
Sbjct: 1   MKVRASVKKMCEFCRTVRRRGRVYIYCSSNPKHKQRQGLSTFASEAPSPSLFSRSEVKEK 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Sbjct: 61  ILPSHSSRTGLASLIPQKHEPTMLFGWRMGLASILWKKQN 100

[Close]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL
Match: A0A1S3B8W2 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103487446 PE=3 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.41e-55
Identity = 87/100 (87.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60
           MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFA EGPSP LFSR+EVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFACEGPSPSLFSRTEVKQE 60

Query: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100
           ILPS   R GLASLIPQK+EPT + GWRMGLASILLKKHN
Sbjct: 61  ILPSQGSRMGLASLIPQKNEPTMLLGWRMGLASILLKKHN 100

[Close]

BLAST of MC06g0603.1 vs. TAIR 10
Match: AT5G20180.1 (Ribosomal protein L36 )

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 68/103 (66.02%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSP-PLFSRSEVKQ 60
           MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA EG +P PLF+     Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60

Query: 61  EI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 101
           E+  LP      GLASL+ ++  PT  FGWR GLASIL K+ N
Sbjct: 61  ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 103

[Close]

BLAST of MC06g0603.1 vs. TAIR 10
Match: AT5G20180.2 (Ribosomal protein L36 )

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 68/103 (66.02%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSP-PLFSRSEVKQ 60
           MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA EG +P PLF+     Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60

Query: 61  EI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 101
           E+  LP      GLASL+ ++  PT  FGWR GLASIL K+ N
Sbjct: 61  ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 103

[Close]

BLAST of MC06g0603.1 vs. TAIR 10
Match: ATCG00760.1 (ribosomal protein L36 )

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MK+R+SV+K+CE CR ++RRGR+ V C SNP+HKQRQG
Sbjct: 1  MKIRASVRKICEKCRLIRRRGRIIVIC-SNPRHKQRQG 37

The following BLAST results are available for this feature:

BLAST of MC06g0603.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73300	4.0e-10	76.32	50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111...	[more]
A5VLI2	6.8e-10	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 ...	[more]
B2G8V5	6.8e-10	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 G...	[more]
B3WAJ5	8.9e-10	73.68	50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ...	[more]
Q035A6	8.9e-10	73.68	50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 170...	[more]

BLAST of MC06g0603.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144930.1	1.23e-65	100.00	uncharacterized protein LOC111014487 [Momordica charantia]	[more]
XP_038879717.1	2.13e-57	90.00	uncharacterized protein LOC120071478 [Benincasa hispida]	[more]
XP_022987917.1	3.03e-57	90.00	uncharacterized protein LOC111485318 [Cucurbita maxima]	[more]
XP_022933442.1	1.75e-56	88.00	uncharacterized protein LOC111440855 [Cucurbita moschata] >XP_023531008.1 unchar...	[more]
XP_004150587.2	2.40e-56	90.00	uncharacterized protein LOC101223220 [Cucumis sativus] >KGN65627.2 hypothetical ...	[more]

BLAST of MC06g0603.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT08	5.95e-66	100.00	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111014487 PE=3 SV=1	[more]
A0A6J1JBN8	1.47e-57	90.00	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111485318 PE=3 SV=1	[more]
A0A6J1EZS5	8.48e-57	88.00	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111440855 PE=3 SV=1	[more]
A0A6J1I4R0	3.46e-56	87.00	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111470644 PE=3 SV=1	[more]
A0A1S3B8W2	1.41e-55	87.00	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103487446 PE=3 SV=1	[more]

BLAST of MC06g0603.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20180.1	3.6e-30	66.02	Ribosomal protein L36	[more]
AT5G20180.2	3.6e-30	66.02	Ribosomal protein L36	[more]
ATCG00760.1	1.3e-08	65.79	ribosomal protein L36	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000473	Ribosomal protein L36	TIGRFAM	TIGR01022	TIGR01022	coord: 1..38 e-value: 7.1E-18 score: 62.4
IPR000473	Ribosomal protein L36	PFAM	PF00444	Ribosomal_L36	coord: 1..38 e-value: 5.6E-22 score: 77.6
IPR000473	Ribosomal protein L36	PROSITE	PS00828	RIBOSOMAL_L36	coord: 11..37
IPR000473	Ribosomal protein L36	HAMAP	MF_00251	Ribosomal_L36	coord: 1..38 score: 18.611782
None	No IPR available	PANTHER	PTHR18804:SF16	RIBOSOMAL PROTEIN	coord: 1..99
None	No IPR available	PANTHER	PTHR18804	FAMILY NOT NAMED	coord: 1..99
IPR035977	Ribosomal protein L36 superfamily	SUPERFAMILY	57840	Ribosomal protein L36	coord: 1..38

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC06g0603	MC06g0603	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC06g0603.1-cds	MC06g0603.1-cds-MC06:4936912..4937059	CDS
MC06g0603.1-cds	MC06g0603.1-cds-MC06:4937701..4937852	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC06g0603.1	MC06g0603.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome