MC05g_new0206.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC05g_new0206.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 11005847 .. 11009342 (+)
Sequence length	282
RNA-Seq Expression	MC05g_new0206.1
Synteny	MC05g_new0206.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCTCCTGCGAAGACGAGTGGCGACCGAAGCTGGTATAGCGAACGGTAAAGGTCGGCGACGACGGAAATTGCAAAGGTCGACGGCGACGGGAGCTAGAAGGTCTGCAATGACGAGAGCTGCGAAGGCTCGCGACAACGGGGAGCTTGAGTGAGAGAAGAAAATGGAGGATGGAGGCTTAAAGAGAAAGGTTGGATGAAAATGTGATTGAAAGTGAAAAGATAGGAACCCTAGCTTACCATCAATTGCTAGGATTAAAAGTCAATAAAGGGTTGAGATTGGAGATAAAAAGATTATTATATATTTATAATTTTAAAATAAGATATATATATATAAAGGTTTTATCAGGTTGGGTCGGGTTGACCCGAATTTTTAAAGGTCTAACCCGAGACCCGACACGATCCTGTCGGGTTGGAAATTTCTCAACTCAACCCGAACCGGAGATTAATTGAACCCAACCGGGTTGGGTTGGGTTTTTCGGGTTCGTCGGATCATCGGGTTTTTTAAACACCCCAAATAGAAATTGGAGTTTTGAAGAGAACAAAAATTGAAGCTTTAAAGAGAGATTAACAAGGTAGAAATTGGAGAGAAAATTAGGGAGAAAAAGATATTGAAATTTGGAAGAGAATAATTGTTTAAATAGAAGGGAAAAAGTTTGAAAGAATTTTGAAATTGAAATTAAATTTGGACCATTGGATTGAGAATAAATAAGAAATTAAAAGATGAGATTTAATTGAATATAATAATATATATAAAATAACCCAACGGTCAATTTGAGAAAAATCAAGATATTTTTTTAAATAAAACTGACACAGGGTCGGTAACTATTTGCTTTTTCTCTTTTTTTTAAACCTCAAACGGTAACTTCCAAACTTTCTTTCTTTTTTTTTTCTTTCGTTTCTTTCAAGTTACCTCAACTGTAACTTTTTATATTTCTTTTTTTTTTCAAATACTTTTTCTTTTCTTTTTCATTTCATTTCTTTTCTTTTCCGTTTCTTTTTCCTTCTTTTTTTTAACAATACATTTTGCCACATGTCAATATTTTTTTAATAATGCAGCTCGCCACGTGTCATCATGTTATTGATCTACTTGTGGATCCAACTGCCACGTCATCCACTTGAGTATTTTTCCAACTGCCACGTCATCCACTTGAGTATTTTTCCTTCCAATTTCTTTCGATCATAATTTCTTCATTTGAGCTCCGATTTGGGTAATTCAGAATTCGTTGGAATCGTCATATCGAGCTCCACCCTGTGTGGACACTTTAAAAAACTAAAATTATCAATAAACAAAATATGTATCATCAGTAAATCATATAATATTATTGAAGCTCATAATAAACTTATGTTTTATAACAATAATTCTTACACACCAAAAACAATTAATACTAAATGTGTTTGTTATCATCAAAATATTAATTAATTAAATTAATTAACCGAGATTAAGGGCTAAAAAGCCAACAATATATACACTATTTATTAAATATATACCATATATAAGTTATATACTGTTCCAGTTACATGACATTGTTGGATCGGTATTATTAAATATATACCATATATCAGTTATATAATGTTCCAGTTACATGACATTATTGGATCGATATGACAACCCTAGCAGAGGGTGAATACGGGTTAATCAATAAACAAATAAGTAAACTTTTTAACACAGTGGACCAAATTTAAACAAATAAGTAAACTTTTTATGAGCACGTAATTGTAACACAAAATTAATCAATAAATTAGAGATAACATTTCAAGCACCCAAATTAATTTCAATGTAAATATTACACATAAAACATGAATAACAAATTCTAGCAATTAATTTCATGCAATTTATGATATAGAAAATTAATTGCAAAAATTAAATAGATGAGAATTAGAGAAAATGACACCGAAAATTTTATAGTGGTTCGGGAACATCGGCCTACTCCACTTCCCAAGCTCTGACTCTTTCCACGCTGGGAGTCACACCGGTACAATGCCTTCTTTTTTTGGGAGTAAGAAGAAACTCGATCCTTTCCATGGTTTAGGATCAAACCGTTACAACATTCTTTTTTTTTTCGGGCTCAAGAGCAACCCTTACAAATAATTGGAAATTTTAAGAACAAGATTACAACTCTCTCAAAAGAGTGGATGTAGAAATTTACATTCACAAATTTGTAAGAAAAATTCTTACAAATAAAAGGATTTCTCTCCCAGCTTTGCATAGCTCAAGATTAAATGGCCTAGAGAAATAAAATTGAATAGATCAAAGATCTCTCAAATTAAAATTTTCTCTCACTAGAAATTATAAAAACATTGAAATTTTGGAGAGAAGAAACATGAAAAAATTGGAGAGAAAATGGGGCGAGAATTGTTGTAAAAATTTGAGAGAATGAAAGGGTTTAAATAAAGAAAGAAAAGTTGGAAAGAAATTTGAAATCAAATTTGGATTTGAACCATTCGATCTTAAATGATTAAAAATAAAAGGTAAAGATTAATTTGAAAAAGAAATTGAATTTGAAAATATAATATAATATAATAATGTTATATATATATATATATATATTTCTCTCTCTAACAATTACTTTTTTTTAACTAACAGCTCATTTCTCTCTCTCTCTCTTTTTCTTTAAGTTACCTTCAATGGTAACGTTTCTTTTATTTTCTTTATTTTCTATTTCTTTTTCTTCTTTTCTTTTTCTATTTATTTTTCATATTTTCTTTATCTTTCCTTTTTTTAATAACACAAATTGCGCCACATGTCGTTTTTCCTTTGGTATGCTTGGATAACTCAGTTGTCACACAATGTCGCTTTTCCTTTGGTATTTTTCCTTTCAACTTCATTCGGGTGTAACTTCTCTGTTTGAGCTTTTATTTAAATGATCTAATAGTCGTTGAAATCATTGTAACGAGCTCTACGCTGTAGACACTTTAAAATACTAAAAATGTTAATAAATAAAATTAAGTTTGTTATCATCAAAACATTAATTAATTATTTATTTAAAATTAATTAATTTGAGATTAAGGGCCAAAAAACCAACAAACATCACCTTGAATGTTAGTTTATAAAATTTTAGGTTAATTCAATTTAAAAAAAACATCAATAACAACTTTATTGAATAAATATTTGTTTTACATTTACAATCACGAGTTTATGACATAAAACCCAACATTCAGAAGGTATCCGAACATCCTGGGTAATGAATTACCCAACCTCTTATAGGTGAGTGAAGCCGAATTAGTTTGTAAGGAAAGCAAAGATTTCCTCCCTCAATTTCGATTGATCATGGTTAGATTGGCAATTGGTGCTGAGTACACTTAATAAAGTCTGCTAATGGCGGTAGCGATATGGCGAGGTTGACATGGCTTTTCCTCTGCAGTCGAGCTGACATCACCAGGTCGGCATACCTCCTGGATGTTCGACAAAGTGGTTGCCCATTTTTCTCCCCCATAACATCAACCCCCACTTTGCAAGTTCAAGGATCTATCTCCCAGCTTTGCAAATGA

mRNA sequence

ATGGCGAAGCTCCTGCGAAGACGAGTGGCGACCGAAGCTGGTATAGCGAACGGTAAAGGTCGGCGACGACGGAAATTGCAAAGGTCGACGGCGACGGGAGCTAGAAGGTCTGCAATGACGAGAGCTGCGAAGGCTCGCGACAACGGGGAGCTTGATCGAGCTGACATCACCAGGTCGGCATACCTCCTGGATGTTCGACAAAGTGGTTGCCCATTTTTCTCCCCCATAACATCAACCCCCACTTTGCAAGTTCAAGGATCTATCTCCCAGCTTTGCAAATGA

Coding sequence (CDS)

ATGGCGAAGCTCCTGCGAAGACGAGTGGCGACCGAAGCTGGTATAGCGAACGGTAAAGGTCGGCGACGACGGAAATTGCAAAGGTCGACGGCGACGGGAGCTAGAAGGTCTGCAATGACGAGAGCTGCGAAGGCTCGCGACAACGGGGAGCTTGATCGAGCTGACATCACCAGGTCGGCATACCTCCTGGATGTTCGACAAAGTGGTTGCCCATTTTTCTCCCCCATAACATCAACCCCCACTTTGCAAGTTCAAGGATCTATCTCCCAGCTTTGCAAATGA

Protein sequence

MAKLLRRRVATEAGIANGKGRRRRKLQRSTATGARRSAMTRAAKARDNGELDRADITRSAYLLDVRQSGCPFFSPITSTPTLQVQGSISQLCK

Homology

The following BLAST results are available for this feature:

BLAST of MC05g_new0206.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g_new0206.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g_new0206.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g_new0206.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..49

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC05g_new0206	MC05g_new0206	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC05g_new0206.1-cds	MC05g_new0206.1-cds-MC05:11005847..11006001	CDS
MC05g_new0206.1-cds	MC05g_new0206.1-cds-MC05:11009216..11009342	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC05g_new0206.1	MC05g_new0206.1-protein	polypeptide