MC05g0296.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CAGTCTGTTACTTTGCACACGAACCTCGGAGACATCAAGTGCGAGATTTTTTGCGATGAAGTTCCGAAGACTGCCGAGGCAAGTTCATCGTTCGTTTCTTCTGATTTTTAAGTTTACTCCATGTATCGGGAACTGCTATAGATTAAGCAAGTAGTAATTGCCTACTGATAATTTGATACCCCGATCCTTTTATCCGTAAGAATGATCAGACTTTTCTTAAGAGTTTCGTAGTGGTTAGTCGTGACTAGAACTCAATTCCTCGAGATGAAGTAAGGAGCTAGGTTTAAATTTGTCGTGAAGCGTATCAGCGTGTTTATTAGTTTTTGCAACCATTGCATTTCCGAAAGGGATATCTGCATTTTCTTTTAATTTTATTATCTATAAAACCTCGAGCGCGCAGTTCCTCCTAATTGCTAGAGGTTTATGGCTTGTCATTTGCCTTCTGCTTCACAATGGGGAGGGTGATAATTAAGAAATACTTATAATAACTGTAAGTAGTTTCTGGGCAAATGGTTTCATTGAAATTAAACTAACACTTAACTGACTTCTCTCGGCATATGTTAAGTAATGAAAAATTGCTTGTTTTCTCCTTCGTTGTTGCAAATGAATGGCAGCTAGCGAAGTTCACTTAACCTGAGTAATTTTGGTACGGCGTGTTTTGGTAATTACATTGAGATTGAGATGTTATTAATTAGTTCTCATTGGTCTTAGATTATGCATTAGTTTTTCATACATGTTGAATTGGCCTGGCTTGGCAAATAGAGAAGTAGCAAAGTCATGGATTTGGATATTGTCCATATTTAAGGTGTATGAAGCTGTAGACGTCAGAATGGTATCATTTTCTAGGCCAATGTATATTTACACTCTGAGAGTTGGAGAGTTGTTCTTCTTTCAGTTTTTCTGTAGCATAGGAAGTCTTCATTTCATTCCGAGAAGATTTTCTTGTCTAGCTTCTTGTTAACTCAGTTTATTATCTTAAAATGACATCCTTCTGTACGTTCATGTGCTTTTTATGTTAGAGTGCCTAGAAAATACTGGCCAGAATTCTGCTTCCTCCCGTTTTCTGTCTGCTGGATTTTTGTCATTTGCAATGTTCATTCTGATGACACAAATATTTTCTTGGTTACAGAATTTTTTGGCACTATGTGCAAGTGGTTACTATGATGGAACCATATTCCATCGAAATATTAAAGGTTTTATGATTCAAGGTGGAGATCCAACAGGCACGGGAAAAGGGGGAACCAGCATATGGGGTAAAAAGTTTAATGACGAGATAAGAGAGTCGCTCAAGGTACGTAATGAGATGTACACCATGTCATCTATCAGCTTACTATAACTCAAGCTTCTTGTTCTGACCTAAATACAATGGGAGACATGCTTATTCGATGAAAAATTGCATCCCAAACTATGCTGTCAAATCTGAGGTCCAAATCGGAAGTTCAATAAGGCTTCCTGTCATAAGCTGTTTATATGATCTAATCTGATTCCTATTTTAAAATTGTCTGTCTCTGTTCTGGTTGTGCAGCACAATGCAAGAGGAATACTATCAATGGCTAATAGTGGAGCTAATACAAATGGAAGCCAATTTTTTATAAGTTATGCAAAGCAGCCACATCTAAATGGATTATACACTGTATTTGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGGTACACGTTTATTTGGGGAGTTTTTTCTTTTTGGTATCTTCCCATGCCCTCACTGCCCTTCCTTGTGCACTCATCCAGCACTGTCCACTTGAGCACGACTTATGCAAATCAAGTTATATCCTTTTAATTTAACCACCACGAATTTTTCTTGTACTAGCATTTAAAAAAAAGAGCTGCAAATCTAGGTGTTTTTGAAGTCATGGGTTCTGCTTTGATAACCAACTAGGTAGGAGTCGTAGGACATAAGCAGGCTAAGAACTCCCAATTATTATAAATTGGTAGCTAGAGAAGATGCTGGGCATAGCTTTGCAGGTAACTTGTTGAGTATGATTTGAAGTATGAATTTGCTACTTGCATTGATTTGCAGCCAGTGAATCTTTGTTTTTTGTTGTATGGGTTCTTTATCTTTGAGCTAGCTGGTTAAAACGTTTAAATCGTTTACACCTGATAGAATCTCGATTCTATTATTTATTTTAAGAGAAGAAACTACAAGCCAAGGGAGAATTTGAGATTTCCCTGTTCTCTCCTGACACCATTTATTCATAAACAAGCCAAAAAAATCCCTATCCTTCTCCCCTGTATTGAGATATATACCCTATACTATGTAATACCATATTTGCTTCTCTAGCTAACTTTGGCCCGCGCCCGTAACAGAAATCTCACCGCCCTTTACATCAGCTGCTCACCCCCTCTTTTTTTCTTTCCGTAATATACCTTCCTAATTGGGGTCTACCAGTGTCTTAACCCGATGTATTGCTTTGTGCAGACTCAAACTGGAACCGGAGATCGACCTCTTGCAGAGATCAGGCTCAATCGGGTTACGATACACGCCAATCCTCTTGCTGGCTAACCTTGAATTAGCAGCAGTTGAAATGAATATTGATGGAAGTCCCATTATTTGAATGATACAAATTGTTTAGAGTTAAATGCTGCTGCTATGATCAGCTAGAAGCTGTTTAGTGAAATTAACACGACTCGTTCGAAATAGAGAATCAGAAGTAAATCATACACAACTCGCAATATGGTATGACTATTTTCAGATGTACAATTTTCTCTTATCAATTTTCTCCTGTACTGAAAATTTCGTGTATGTTTGGTTGAATTGGTTTTATGTATTCTCCCAAACCATATTTAGACATTTTTTTTTATTTAAAAAAAGCAAAATCATATTTAGACAATCTTGTACTTGAGGATTTCCC CAGTCTGTTACTTTGCACACGAACCTCGGAGACATCAAGTGCGAGATTTTTTGCGATGAAGTTCCGAAGACTGCCGAGGCAAGTTCATCGTTCAATTTTTTGGCACTATGTGCAAGTGGTTACTATGATGGAACCATATTCCATCGAAATATTAAAGGTTTTATGATTCAAGGTGGAGATCCAACAGGCACGGGAAAAGGGGGAACCAGCATATGGGGTAAAAAGTTTAATGACGAGATAAGAGAGTCGCTCAAGCACAATGCAAGAGGAATACTATCAATGGCTAATAGTGGAGCTAATACAAATGGAAGCCAATTTTTTATAAGTTATGCAAAGCAGCCACATCTAAATGGATTATACACTGTATTTGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGACTCAAACTGGAACCGGAGATCGACCTCTTGCAGAGATCAGGCTCAATCGGGTTACGATACACGCCAATCCTCTTGCTGGCTAACCTTGAATTAGCAGCAGTTGAAATGAATATTGATGGAAGTCCCATTATTTGAATGATACAAATTGTTTAGAGTTAAATGCTGCTGCTATGATCAGCTAGAAGCTGTTTAGTGAAATTAACACGACTCGTTCGAAATAGAGAATCAGAAGTAAATCATACACAACTCGCAATATGGTATGACTATTTTCAGATGTACAATTTTCTCTTATCAATTTTCTCCTGTACTGAAAATTTCGTGTATGTTTGGTTGAATTGGTTTTATGTATTCTCCCAAACCATATTTAGACATTTTTTTTTATTTAAAAAAAGCAAAATCATATTTAGACAATCTTGTACTTGAGGATTTCCC CAGTCTGTTACTTTGCACACGAACCTCGGAGACATCAAGTGCGAGATTTTTTGCGATGAAGTTCCGAAGACTGCCGAGGCAAGTTCATCGTTCAATTTTTTGGCACTATGTGCAAGTGGTTACTATGATGGAACCATATTCCATCGAAATATTAAAGGTTTTATGATTCAAGGTGGAGATCCAACAGGCACGGGAAAAGGGGGAACCAGCATATGGGGTAAAAAGTTTAATGACGAGATAAGAGAGTCGCTCAAGCACAATGCAAGAGGAATACTATCAATGGCTAATAGTGGAGCTAATACAAATGGAAGCCAATTTTTTATAAGTTATGCAAAGCAGCCACATCTAAATGGATTATACACTGTATTTGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGACTCAAACTGGAACCGGAGATCGACCTCTTGCAGAGATCAGGCTCAATCGGGTTACGATACACGCCAATCCTCTTGCTGGCTAA QSVTLHTNLGDIKCEIFCDEVPKTAEASSSFNFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGANTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDIMEKTQTGTGDRPLAEIRLNRVTIHANPLAG Homology
BLAST of MC05g0296.1 vs. ExPASy Swiss-Prot
Match: Q9LPC7 (Peptidyl-prolyl cis-trans isomerase CYP18-1 OS=Arabidopsis thaliana OX=3702 GN=CYP18-1 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.4e-84 Identity = 150/164 (91.46%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy Swiss-Prot
Match: P0CP87 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CYP10 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61 Identity = 111/163 (68.10%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy Swiss-Prot
Match: P0CP86 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CYP10 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61 Identity = 111/163 (68.10%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy Swiss-Prot
Match: P0C1I5 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=cyp4 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-60 Identity = 118/170 (69.41%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy Swiss-Prot
Match: Q54E95 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum OX=44689 GN=ppil3 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.9e-58 Identity = 112/163 (68.71%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of MC05g0296.1 vs. NCBI nr
Match: KAG7028652.1 (Peptidyl-prolyl cis-trans isomerase CYP18-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 330 bits (846), Expect = 8.32e-114 Identity = 159/164 (96.95%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of MC05g0296.1 vs. NCBI nr
Match: XP_022146899.1 (peptidyl-prolyl cis-trans isomerase CYP18-1 [Momordica charantia]) HSP 1 Score: 325 bits (833), Expect = 4.11e-112 Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 0
BLAST of MC05g0296.1 vs. NCBI nr
Match: XP_022936304.1 (peptidyl-prolyl cis-trans isomerase CYP18-1 [Cucurbita moschata] >XP_023540164.1 peptidyl-prolyl cis-trans isomerase CYP18-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 321 bits (822), Expect = 1.96e-110 Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0
BLAST of MC05g0296.1 vs. NCBI nr
Match: XP_008438142.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Cucumis melo] >KAA0049022.1 peptidyl-prolyl cis-trans isomerase CYP18-1 [Cucumis melo var. makuwa]) HSP 1 Score: 319 bits (817), Expect = 1.13e-109 Identity = 155/165 (93.94%), Postives = 158/165 (95.76%), Query Frame = 0
BLAST of MC05g0296.1 vs. NCBI nr
Match: XP_004306904.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Fragaria vesca subsp. vesca] >XP_024172248.1 peptidyl-prolyl cis-trans isomerase CYP18-1 [Rosa chinensis] >PRQ57667.1 putative peptidylprolyl isomerase [Rosa chinensis]) HSP 1 Score: 319 bits (817), Expect = 1.13e-109 Identity = 154/165 (93.33%), Postives = 157/165 (95.15%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy TrEMBL
Match: A0A6J1CZE3 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111015986 PE=3 SV=1) HSP 1 Score: 325 bits (833), Expect = 1.99e-112 Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy TrEMBL
Match: A0A6J1F7X6 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111442962 PE=3 SV=1) HSP 1 Score: 321 bits (822), Expect = 9.48e-111 Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy TrEMBL
Match: A0A2P6SG56 (Peptidyl-prolyl cis-trans isomerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0350841 PE=3 SV=1) HSP 1 Score: 319 bits (817), Expect = 5.49e-110 Identity = 154/165 (93.33%), Postives = 157/165 (95.15%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy TrEMBL
Match: A0A5A7TZQ4 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002480 PE=3 SV=1) HSP 1 Score: 319 bits (817), Expect = 5.49e-110 Identity = 155/165 (93.94%), Postives = 158/165 (95.76%), Query Frame = 0
BLAST of MC05g0296.1 vs. ExPASy TrEMBL
Match: A0A1S3AVB8 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103483338 PE=3 SV=1) HSP 1 Score: 319 bits (817), Expect = 5.49e-110 Identity = 155/165 (93.94%), Postives = 158/165 (95.76%), Query Frame = 0
BLAST of MC05g0296.1 vs. TAIR 10
Match: AT1G01940.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 313.5 bits (802), Expect = 9.9e-86 Identity = 150/164 (91.46%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of MC05g0296.1 vs. TAIR 10
Match: AT5G67530.1 (plant U-box 49 ) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43 Identity = 82/160 (51.25%), Postives = 100/160 (62.50%), Query Frame = 0
BLAST of MC05g0296.1 vs. TAIR 10
Match: AT2G36130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.1e-42 Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 0
BLAST of MC05g0296.1 vs. TAIR 10
Match: AT3G44600.1 (cyclophilin71 ) HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41 Identity = 78/158 (49.37%), Postives = 107/158 (67.72%), Query Frame = 0
BLAST of MC05g0296.1 vs. TAIR 10
Match: AT3G63400.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29 Identity = 73/154 (47.40%), Postives = 93/154 (60.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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