MC05g0270.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GGGGAAAAAGGTAAAATTTAAACCACACGAAATTGGAAGAAAGAGGAAAAATAGATAGAAGCAGCGCCATTCTTGAGAGCTCAGCGGGCGCGGCAAAAATGGCGCCGTCCCTTTGCTTCCAGTTACACACTTGCTCGCAGCTCGGTTGCATTGCTGCTGCTAAGGCGGCGGCGCCGTCGAGCGTCGCAACCGCAAATAGAACATTGTCTCCGTTCCTCAGGCTCAGACGACCATTTCTCCATAGCTTCTGTGTAAGATTGGGCCCTTCCGCCGAGGTTTTCGAGCCGCAACATCTCCGGAGTCCGGAACTCGTGGCGTTGGAATATGCCGACCTTAATCTCCCTCACAGGATCTTCGAGGTTTGTTCTCTGTTCACGAATTTTGCCCCTAATTTCTGAAATTGCAATTTCATCTCGAAGTAGAAAGTGGTGATAATTAGAATTGATGTGCATTTGACTTGAATTTGGTAATTGCAGGATTCGGGTCACGTTAGAATCAGACAGCACGTTAACCCTCTCAGCTCTTCTTTCGCTGTATGTAATTTGAACTTTGGAACTATGGCTTTGAAATTTAGTTGAGTGTTGGTGGCTTAAAGGAAGGTTCCCCATCTTTTACCTTTCAGGTCCCTGCACCAGCACCTAATTGGAACGAAGTCTTCAAGGATCCCACATTACCCCTCATGGTCGATATAGGAAGTGGTGAGCGAGTTTTCTCAGTTCATATTATACAGACCTCTGACATACCTGTTTTCTCCATAATTGCCTTATTTTTTAGCATCCGAGCTAGTTTATATGTACTTTAACAAATTTCACGAGATAACTGTCCATCTTATATAACATTTGGCTGAGCCCATATTCCTAAAATCCTTCTACCTTTTGCCTTTGATTACTAAGTCAACCCAGGATGATTACTATTGTCATTGTCTTTTTATCTTTTAGCCTCCTGCTTTGAATGGAAGACAGTCATGAACAAATCTTCAAAGCTGCTGCTGCTGCTTTGAATAAGACGTACAAACTGAGTAAATAAAAGGGTAATCTGGCTGGTGAAAAAATTGTATTTAACAACGGTTAATGTCTGAAGAATGAAATATCATTCGCAAGTAACATATTGATTAGTGCATTCACTAATCTACTTTACCTTGCACTGTAACTCAAAATTAAACTTGACATGCATAATAAAGCAGCTATAGTTATGAAATCAATACAGTACATGCGGAGCAAAAAACTCTGAGCAATAGCAGCTATGAGCTACCCCTCATGACTTCTATATGTTGGTGCTAGCCAGTAAATGCTAATAAAAATGTCAGTCCCCTAAGTTGACCCGAAGGATTTACAGTGTTCGTAGTGATAGTAAGGTTTCAAATGCTCGTTGCATATCAAAAAGTATGTATTCACATGCAAGAAAATTATCTGTCTGATATGCTGTAATGATCTACGATAGGTCATTACTTTTAAAAATGTTCAAAACCTTGATTACCTCCCAACATTGGTTTAATTAGCCTCATTACATGCTTCTTGTGGGATTTATGAGGCTGTTTTATGCTTTTTTGTCCATTAAGAATCTAAACATGTATTATTACTCCCAGGTAGTGGCAGATTTCTCCTTTGGCTTGCAAAAAGACATCTTGATATGAGAAATTTCTTGGGTCTGGAAATACGACATAAAGTATGCAACCAAAAATTTTCACTTTTGACGCACCCTTAGTTGGTTTGAACTATCTGATTTTCATTCTGTCTAGGCCTTATATTGTGGTTTGGTTCCTTTTGTGCTCTTGCAGCTGGTCAAGCGTGCCGATATCTGGGTCAAAGAGTTGGGACTTAGCAACGTGTAAGGACCTTAACTTCATATCAGGTAGTGAAAAACAACCTCCTTTATACTACTGGTGCATTAGTAATGAACTTTTTCAAAACTTGAATGCAGACATTTCATGTTTGCAAATGCTACAATTTCCTTTAAACAGATCATATCTTCCTATCCTGGACCCCTGATGCTGGTTTCCATACTGGTTAGTGTAACACACTAGATCAACATATTTTTTTCGGTTACCGTTGATCTGATCCGATAATTATCGACAAAGAAAGAACTCGCTCACGTTTAATCTCAGTGCCCAGATCCCCATTTCAAGAAACGGCATCACAAGCGAAGGGTTGTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAACTCCTGGAGGGCAGGTATATGATCTTGTAATTCATCCATTACATTGAAAGTTTGGCTCTCTGTTCTTTGAACTTGATGCAATCTGATGCTGTTTTCTTTTGAGATCAATGCAACTTGATGAGTCTGATGTTGGAACTTCTCTTCTTTATGAGATTCTACAGGTGCTCATACAATCTGATGTTCTTGAAGTGGCAGTCGACATGAGGCTTTGGTTCGATTCTGAAGCCGATGTTCTAAAACACATCGATGTGCTCGACCCGAGTGTTTTGTGTGACGAAGATGGATGGTTGTTGAACAATCCAATGGGAATAAGGACCGAAAGAGAAATTCATGCCGAATCCGAAGGTGCGAAAATTTATAGAAGAATGTATCAAAAGTTTACATGACAAAAGAATAACTGAAGAGTAACTAGATAGATTGTTTAATGGTAATCTGTTTGCATTTTAGTCAGTATTTACTGGTTTATCTTTTGAGGCCATCTATCTACTCTTATTGTTAGGAAATTATGAAATATTTTCTTCAAATAAATTTATTACATATTTATGAAAATAATAAAATAGAAATCTTTTATAATATTTCAATTAAAATATAGTTTGGTC GGGGAAAAAGGTAAAATTTAAACCACACGAAATTGGAAGAAAGAGGAAAAATAGATAGAAGCAGCGCCATTCTTGAGAGCTCAGCGGGCGCGGCAAAAATGGCGCCGTCCCTTTGCTTCCAGTTACACACTTGCTCGCAGCTCGGTTGCATTGCTGCTGCTAAGGCGGCGGCGCCGTCGAGCGTCGCAACCGCAAATAGAACATTGTCTCCGTTCCTCAGGCTCAGACGACCATTTCTCCATAGCTTCTGTGTAAGATTGGGCCCTTCCGCCGAGGTTTTCGAGCCGCAACATCTCCGGAGTCCGGAACTCGTGGCGTTGGAATATGCCGACCTTAATCTCCCTCACAGGATCTTCGAGGATTCGGGTCACGTTAGAATCAGACAGCACGTTAACCCTCTCAGCTCTTCTTTCGCTGTCCCTGCACCAGCACCTAATTGGAACGAAGTCTTCAAGGATCCCACATTACCCCTCATGGTCGATATAGGAAGTGGTAGTGGCAGATTTCTCCTTTGGCTTGCAAAAAGACATCTTGATATGAGAAATTTCTTGGGTCTGGAAATACGACATAAACTGGTCAAGCGTGCCGATATCTGGGTCAAAGAGTTGGGACTTAGCAACGTACATTTCATGTTTGCAAATGCTACAATTTCCTTTAAACAGATCATATCTTCCTATCCTGGACCCCTGATGCTGGTTTCCATACTGTGCCCAGATCCCCATTTCAAGAAACGGCATCACAAGCGAAGGGTTGTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAACTCCTGGAGGGCAGGTGCTCATACAATCTGATGTTCTTGAAGTGGCAGTCGACATGAGGCTTTGGTTCGATTCTGAAGCCGATGTTCTAAAACACATCGATGTGCTCGACCCGAGTGTTTTGTGTGACGAAGATGGATGGTTGTTGAACAATCCAATGGGAATAAGGACCGAAAGAGAAATTCATGCCGAATCCGAAGGTGCGAAAATTTATAGAAGAATGTATCAAAAGTTTACATGACAAAAGAATAACTGAAGAGTAACTAGATAGATTGTTTAATGGTAATCTGTTTGCATTTTAGTCAGTATTTACTGGTTTATCTTTTGAGGCCATCTATCTACTCTTATTGTTAGGAAATTATGAAATATTTTCTTCAAATAAATTTATTACATATTTATGAAAATAATAAAATAGAAATCTTTTATAATATTTCAATTAAAATATAGTTTGGTC ATGGCGCCGTCCCTTTGCTTCCAGTTACACACTTGCTCGCAGCTCGGTTGCATTGCTGCTGCTAAGGCGGCGGCGCCGTCGAGCGTCGCAACCGCAAATAGAACATTGTCTCCGTTCCTCAGGCTCAGACGACCATTTCTCCATAGCTTCTGTGTAAGATTGGGCCCTTCCGCCGAGGTTTTCGAGCCGCAACATCTCCGGAGTCCGGAACTCGTGGCGTTGGAATATGCCGACCTTAATCTCCCTCACAGGATCTTCGAGGATTCGGGTCACGTTAGAATCAGACAGCACGTTAACCCTCTCAGCTCTTCTTTCGCTGTCCCTGCACCAGCACCTAATTGGAACGAAGTCTTCAAGGATCCCACATTACCCCTCATGGTCGATATAGGAAGTGGTAGTGGCAGATTTCTCCTTTGGCTTGCAAAAAGACATCTTGATATGAGAAATTTCTTGGGTCTGGAAATACGACATAAACTGGTCAAGCGTGCCGATATCTGGGTCAAAGAGTTGGGACTTAGCAACGTACATTTCATGTTTGCAAATGCTACAATTTCCTTTAAACAGATCATATCTTCCTATCCTGGACCCCTGATGCTGGTTTCCATACTGTGCCCAGATCCCCATTTCAAGAAACGGCATCACAAGCGAAGGGTTGTGCAGAAGCCTTTAGTAGAATCTATAGTAGACAGTTTAACTCCTGGAGGGCAGGTGCTCATACAATCTGATGTTCTTGAAGTGGCAGTCGACATGAGGCTTTGGTTCGATTCTGAAGCCGATGTTCTAAAACACATCGATGTGCTCGACCCGAGTGTTTTGTGTGACGAAGATGGATGGTTGTTGAACAATCCAATGGGAATAAGGACCGAAAGAGAAATTCATGCCGAATCCGAAGGTGCGAAAATTTATAGAAGAATGTATCAAAAGTTTACATGA MAPSLCFQLHTCSQLGCIAAAKAAAPSSVATANRTLSPFLRLRRPFLHSFCVRLGPSAEVFEPQHLRSPELVALEYADLNLPHRIFEDSGHVRIRQHVNPLSSSFAVPAPAPNWNEVFKDPTLPLMVDIGSGSGRFLLWLAKRHLDMRNFLGLEIRHKLVKRADIWVKELGLSNVHFMFANATISFKQIISSYPGPLMLVSILCPDPHFKKRHHKRRVVQKPLVESIVDSLTPGGQVLIQSDVLEVAVDMRLWFDSEADVLKHIDVLDPSVLCDEDGWLLNNPMGIRTEREIHAESEGAKIYRRMYQKFT Homology
BLAST of MC05g0270.1 vs. ExPASy Swiss-Prot
Match: Q2JJQ0 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=trmB PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45 Identity = 104/214 (48.60%), Postives = 131/214 (61.21%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy Swiss-Prot
Match: Q2JRH1 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=trmB PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.0e-43 Identity = 102/211 (48.34%), Postives = 128/211 (60.66%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy Swiss-Prot
Match: P73161 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=trmB PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 1.6e-41 Identity = 96/217 (44.24%), Postives = 127/217 (58.53%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy Swiss-Prot
Match: P72546 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trmB PE=3 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-38 Identity = 92/216 (42.59%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy Swiss-Prot
Match: Q5N2X5 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=trmB PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-38 Identity = 92/216 (42.59%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of MC05g0270.1 vs. NCBI nr
Match: XP_022146903.1 (uncharacterized protein LOC111015991 [Momordica charantia]) HSP 1 Score: 632 bits (1630), Expect = 1.05e-228 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of MC05g0270.1 vs. NCBI nr
Match: XP_022980361.1 (uncharacterized protein LOC111479752 [Cucurbita maxima]) HSP 1 Score: 543 bits (1398), Expect = 2.68e-193 Identity = 269/313 (85.94%), Postives = 287/313 (91.69%), Query Frame = 0
BLAST of MC05g0270.1 vs. NCBI nr
Match: XP_023527130.1 (uncharacterized protein LOC111790461 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 540 bits (1392), Expect = 2.20e-192 Identity = 269/313 (85.94%), Postives = 285/313 (91.05%), Query Frame = 0
BLAST of MC05g0270.1 vs. NCBI nr
Match: KAG7018929.1 (trmB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 537 bits (1384), Expect = 3.64e-191 Identity = 266/313 (84.98%), Postives = 285/313 (91.05%), Query Frame = 0
BLAST of MC05g0270.1 vs. NCBI nr
Match: XP_022924717.1 (uncharacterized protein LOC111432133 [Cucurbita moschata]) HSP 1 Score: 535 bits (1377), Expect = 4.24e-190 Identity = 266/313 (84.98%), Postives = 284/313 (90.73%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy TrEMBL
Match: A0A6J1CZT2 (uncharacterized protein LOC111015991 OS=Momordica charantia OX=3673 GN=LOC111015991 PE=4 SV=1) HSP 1 Score: 632 bits (1630), Expect = 5.06e-229 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy TrEMBL
Match: A0A6J1ITE1 (uncharacterized protein LOC111479752 OS=Cucurbita maxima OX=3661 GN=LOC111479752 PE=4 SV=1) HSP 1 Score: 543 bits (1398), Expect = 1.30e-193 Identity = 269/313 (85.94%), Postives = 287/313 (91.69%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy TrEMBL
Match: A0A6J1E9S1 (uncharacterized protein LOC111432133 OS=Cucurbita moschata OX=3662 GN=LOC111432133 PE=4 SV=1) HSP 1 Score: 535 bits (1377), Expect = 2.05e-190 Identity = 266/313 (84.98%), Postives = 284/313 (90.73%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy TrEMBL
Match: A0A5A7U1F8 (tRNA (Guanine-N(7)-)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003710 PE=4 SV=1) HSP 1 Score: 500 bits (1287), Expect = 1.05e-176 Identity = 248/308 (80.52%), Postives = 267/308 (86.69%), Query Frame = 0
BLAST of MC05g0270.1 vs. ExPASy TrEMBL
Match: A0A1S3AVT2 (tRNA (Guanine-N(7)-)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483376 PE=4 SV=1) HSP 1 Score: 499 bits (1285), Expect = 2.12e-176 Identity = 248/308 (80.52%), Postives = 267/308 (86.69%), Query Frame = 0
BLAST of MC05g0270.1 vs. TAIR 10
Match: AT5G17660.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 364.8 bits (935), Expect = 7.0e-101 Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
BLAST of MC05g0270.1 vs. TAIR 10
Match: AT5G24840.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 59.3 bits (142), Expect = 6.3e-09 Identity = 53/175 (30.29%), Postives = 83/175 (47.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|