MC05g0206.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0206.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA repair protein RAD50
Location	MC05: 1467889 .. 1482446 (-)
Sequence length	4873
RNA-Seq Expression	MC05g0206.1
Synteny	MC05g0206.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGCCTAAATTTGTTGTTATTCGGGCAGGTCCAAAAGTTTACGAATTGGAAGCCCAGGCCCATGAACTAACAGGTGTCGATGGTCAAAGAGTCAAAGCCAGACTCGCGCGCCATATATATATAATATAATTCCTTACCGCGACTGTCCGTCGTTGAAAACTCCGGCGATTTCTTTCTCCGATGGCGTCGGAATTACGGAGCTGAGTCATGGCGACGAGGCGACGAAGTGATACTCTGCAAGCTTCTTCCGAAGTACTTTCTTCAGTGGCAGCATTCTGAAAACCGAACCGATTCCCCACCGTGTGGAGTCTCAGAGTGGGAGAGTGAAACTCCATTCCCGCCATGGTTGCGATTGCTTACCGGCGAAGCTTTCCCGTGTGATTCTCACCTGTGGATTTTCTTGCTCTGTTGTTTTGAAAAGAATAATCGAATAGCAGAGAGAAGGAAAGATGAGTACAGTAGACAAGATGCTGATTAAAGGTATTCGGAGTTTCGACCCCGAAAACAGGAACGTCATCACCTTCTTCAAGCCATTAACTCTGATCGTTGGCCCTAATGGTGCTGGGAAAACTGTAATTTCCTCTCAAACTCCATTTTGAGCTTCTAGTAATTGGTGTTTGTGGTTTTTGCTTTATGATTACTTTCCTCATATAGTGATGAAACATTAACTTTGTTGTAATGGCGGTGCCTTGATTTTTTATTTTTTATTTCCAGACCATAATTGAATGCTTGAAGCTCTCTTGCACTGGCGAGTTGCCTCCCAACGCCAGGTCTGGCCACAGTTTCATTCACGATCCTAAGGTGCGTCGATTTTTGATCCTTAAGACTACTTTTCACTATTCTGCCTTGCACTTTTGATTCGCGAACTTTTTGGTATTCGCTGAGGCGTGCGCCCTAGCGGGGATTTTTGGTAAGCATGCTCAGGTGTACTTTTCAGAACACTCATTTTAGTAGTTCTAAATTATTAATCGCAAACAAAGCAAGATCTCAATCAACCTCATCTTCGAGTGTATAGAATTGGGGATGGATTTAAAGCATCAAGTATCTTTGTTTACTCATTTTGAGTGCCTTCTAGGGAAGCCAGCTAAAGAAATATTGGTTTCATAATTTCCCCTCAACATAGCAATGCAATCAGGTTCAAAAACCTAGTTTATCCATATGCGGGCTTGCCAATATTATCAGTTCATGTAGCTTCTCAATTTGCTGGAGGATTTGGGTTTTACTTCCTTCAAAAACTTACTAGTTTGTCTCTCTGCATGTTGGACCCTTGTGCAGGTTGCAGGAGAGACAGAGACAAAGGGGCAAATAAAACTTCGGTTTAAGACAGCGGCGGGCAAGGATGTGGTTTGTATAAGGTCCTTCCAGCTTACTCAAAAGGCTTCAAAAATGGAGTACAAAGCAATTGAGAGCGTGCTTCAGACTATAAATCCACATACCGGAGAGGTGTTGCAAATTCTTTATTCATGAACATAAACATGAACTTCATTTTATTTTTACTTTTTTACTTATCACTCGCACGGTTAGTCATTTTTTATTTATTACTCACACGGTTTGTCATTATACCGGAGAGGTGGTTGTTTGTTCTGTTGATCATGCATACTCGTTGAAGGATTAGTGGCTATGATATGTTGTGATTTAACCTGTGTGCTTTTGGTTAAAATATTTGACATTCTTAATTTCAGTTATCATTATTTTTATTGTTGTAAAATTGCAGAAAGTTTGTCTCAGCTATAGGTGTGCAGATATGGATAGGGAAATTCCAGCTTTAATGGGTGTGTCAAAGGCTATCCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCTAACTGGCCATTGCAAGATCCTTCAACATTAAAGAAGAAATTTGATGATATATTTTCTGCTACAAGGTACTGTCTCTATGATTTGTCTATGTATTGGAAAAGCCTTTTTTTTTGTTCTTTAATGTTTTTTCCCATATTCCTGTTCTCTGGTCTTTGATTCCCACCATTTCCTCCATTCTTGAGTTGAATGGTGTTTGACTGATTGATGACACAAGTTCATATGTTAATTTTTGAGCATGTACTAATGACCAGATATACGAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGGTTCTTGTTTTTTTTTTTTTTTTGATTGGATATAAGGTTATTGTTTATGTTTTCCATTCATGTGCTGATAACTGATGACATGTACCATATCATCTTGGCTAGCATTTTCCTTTTTGGTGGAGGTAGGTCTAACCTGGGATCCTCCACATCATGAAGTAGATGGGAGTTCCACGTTAATAGTTCCATGAGCGACTCAAGTGGTTGGAACTTTGGGCAACTGGTTTTTCATGTAGGCAATCAGGAATTGAGTCATATTCTTAGTTTGTTGTAATTATTTAGTTTTCTAACTTAGTCTTAGATAAATTATGCTTTGATATTTTACCTGTTTTGAAAGAGAATTAAGGTGAATCAACGGCAAACCTCTAGGGGCACTTGAATTCACAATTTTTTACCTGACTATACAGATGAAAGTTTCTTTTCCTGCTCTATCTGTCTCTCTTCCAGTAACCCTGGCTATCTGAACTAACTTTTGTGCACCTAGACCAATCCTAAAAATGTTTCAACTTTTCAATTTTTCAACATGTGTCCACTTATTAGCACCCTGCTGCCTGAGATCAAAATTGGAATCTCAATTGTATTTTAGTTTGTATTTTGTTCCATCGACACTAGGTTGACCACATGTGAATGTTTGGTAGGTGCAAAGTGTCGATGTTTGGTAATCAATTGTTTAACTGGTTTTCTGTCCTGAGATTTGCACATGGATGTTAAGTCATCCATGTCGTTGAGCCACTTGTATTATTTATCTTCAGTTATCTTTTTGTTTGAGATAGGATGGCAGGTATGGTATCAACCTTCAAATGGCTACTCTGCTTATTTTGTTTGAATACTTTTTTTGATAGTGTTATTTTGCACTGTAGGAGTAGGGGGAGAGGGTCAATATGTGGGAGAATATTAATGAAATTTGTTCGGGTTAACACTCATTTGAAGATGAAAAGAAAAAAGATACGAGTGTTTGAACTCTGAGAAAGAAATGACAGATTGGTTTGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGTAGTTTAGGTATGGACCATATGGTGAGTATTGTAGTCTAGTTCTTAGGTGGGTTGGGTGGTGAAATATGAATTTTAGCTCATTTGTTGATTCTGTTGCCTATGGTGAGATTGTTATGTTGAGGAAAACATGTGGTCGGTCTAAATGTTGTAACTGAATTTAACTACACTATTCAACTTCTGTTTTGCATTCTTACTTGGGGTCCTCTTCTCTCTGTTGGCACTGAATAATGTAACTACTAATTAGCTGCATCCTTGTTTTGTTCTTTTGTGGTTCTGTGATCTGTCCTTGAAGTTTTTATTTGACATTTTAATTGTGAAAGAGAAAGATGTTAGATTTATACTGTACTTGTGTGCGAAGGAGTTGTCTTGCTGACATTTGCTCTCATTATTGCAGCTTAGGGAAAGCATTTCTCAAGATGAAGAAAAAACAGAATCTGTAAAAAGTCAAATGCAGGAACTGGAGAAGAATATCCAAGATATTGATGCTAAAATTCATCATGCTGAAACAATCCTGAAGGATGTCCGAAAACTACAGGACCAAATATCTACTAAGACTGCTGAAAGAAGCACTTTATTTAAGGAGCAGCAGAAGCAATATGCTGCCCTTGCCGAGGAGAATGAAGGTTAGTTCTCGTTGGAGCAGAATAAATAGATTCCAGTTCCTTTATGAATATTAGAAACTTGGTAAAGAACTTTTATCTGGGAGGACTAGCATCCTTATATGGAAAAAAAACCATGTAGTGCATCTATATATTCAATGATTAATGATGTTTAAGATTAGTTGATGTTTGTTTAATTTTTCAGGTTTGGTATTTAAACCATTTAAGTTATCTTTTTTATCTTAATTTTATGTGAAATCCCTTTCATTTTATTTTCCTATTTGGGAAAAGGGTAAAAGGGAAGCCAAGTCCCATGAGAAATTTTAGCAGGTAACTACCTTCTGACTTTTTGTTGTTTGTATTCTACTAATTTGCTTTTCCTTTGCCCCACGTTATCATAATTATTTTATGTCTTCTCAGTACGATCTTCAGTGTGATGTTTCCTTTTTCTGCGGGTTTTCTTCTCATTGACTTCTTTCCATTTGGTAGACACCGATGAAGAATTGAAGGAATGGAAAACCAAGTTTGAAGAAAGGATTGCTATTTTGGAGTCTAAAGTAAGCAAGTTAGAGAGGGAGATGAACGACATGGAGACTAAAAGTTCCTTTCTTAAACAGACAATTAATGAATATATATGGGAGATAAGCAAGCTTCAAACAGAAGCTGAGGTTAGAGATCTTGATACAAAATTTTAACAATTTTCTCCCTGCTTTTTACCATAAAAAAGAATGGGTATGCATTGCACATTCAAATATAGAAGGTGATGGCACACTACTCGTGGAACCTATTTCTGGAATTTTTTAACTTTCGACTTCAGGTGCACATGTCATTGAAGATCGAACGTGATTCTACTATTGAAGAACTTTTTGCAAGACATAATCTAGGTTCTGTGCCAAATACTCCTTTCAGTGACGAAGTTGCATTCAACCTAACAAATAGAATAAAATCAAGATTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGGTAAGTTCTTAGCTTATTTTTTAATTAACTTTCTATTATCTTAGTTGGGTAATGATTTAATCCTCGTGATACACACGGAGTATTTTATAGAAAGCAGTTTGTATCTGTTTTTTTTTTTTAAACCAATATAAAGGAAGTTGAAATTGCAGCTTTCAAATGATGTTGAGCTTAATACTGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATGTTGAGGCTCAAAAACATGCTAAAGCAGAGATTAAGGTATGTCTGAAACAATTGGATAACTTTTAAGTTTTAACCTTATGTCGTATATTAATTGAACTTATGCAGAGAGGAATTATGAAACGAATTGAAGAAAAGGAGAGCGAGCGAGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGGTGGGTTGTAGTTGTCCTACTTCAGGTTTTTTAATTGCATAGTTTTTCTGGGAGGGAGGGACTGGAGATGATCTATATGGACACCATCTCTTGATTATTGCAGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAGAGTGACCTATATGGCATAGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGACTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCAGAGTTAGATAATCATAAAAAGAAGCATAGAAAAATGTAAGTGAATTATCTCTTTCTGGTAAAGATCTGAGGATGCTTCAAACCTTTGGACTAACTTTGTGGGATATTATGCATCTCATATATTTCCTCACTGTCAAAGTGTCGTAGGCCAGTGGTATCCCTATTAACGGACCTGGTTAACATTGAGTGTTTGGGAATTTATACGCAAAGATGTTTTGTCAGCTTGCATTGCAGATATTTATGTTTTTACTTTCCTCTCCATACTTGTTTCTTCAGAATAGATGAGTACAAGGACAAAATTAGAGGAGTACTGAAGGGAAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGTTCTTCTAGCCTCAGTACCTTTTTGCTATCTATTGAAGTATAATTCTAAAGTTGAATGCTTGCTTAATATTATGATTGGGACCAATGCTATCACATATATGAAAGTAGATGATTATTTTGTTTATTTTCTTTACTTGCTAAAATAAGGAACAGTGGAATAAATAAACCGCATTCATAATTAGGGATCATATGAGAGGCATGAAATGTGTTCAACTTCATTTCTATCGCACAACAGGCTATGTCATCGTATTTGCTTGGAATACATTTCAAGAGGATGGTTTCTTTGTACATTGTTTACTGCTCGAGGATGGGGTAGTTATGCTTTAATGTGTCTACTGTTTTGTTATATTATACTTGGAATTTTGTTCTTTAATTTTTCATAGTTAGATATGTTATATTTTTTTCAATTCTCTGTTGCAAGGACATAATATCCCCATGGTAGGAATAGTTAGTTTCTGCCTAAAAGCAATGGCAGAATGAACTGTTGGAGTTCTCAAGAATGTAATATTTGTAATTGTTGATTACCCATCAATTTTTAGTTCTTCTCTTTTGCTTTTGGAATTGGCATGTTTCACAAATTAAGTCTTTGGAGAATATTAGTCTACCCGTTCTGGCTAACTATAGTTTTGAGGGGATTATGTTAGCATAAAAATAGATTGGTCTTCTTGAGATGATTGAATAGAATGGGCTTTATATTCTTTGCAATAGCCATGGCTTTACCTTCCTGTTCAAAGAGCAAGTTTAGATTTTCCTTTCTTGACCCCGAGCACTACACCTTGCTTCTCCTAAAAAGGCCTACCTATCTGGTATGCTTATTGCCATGGCAAATATTGCCTATTTAGCTTATTTAGACAGTAACACAAATAAAATGTGATACATGCTAACAGATGGTATATGCGTTTCAAAATTTTCCAAATAATAGTAATATCATTGTTCTAATATATATTTATAATATTTTTCCTTCAATTTTTTTTCAATAAGAAGCATTTTATCAAAATACCATGGGTATGTTCCATTATACGAAAAATACAAGTTATCTACAATAAAAAAGAATAAAAATATTAGAACATAATTTGTGTGAAGAGTTGGCTAACAGCAAGTAATAGTCAGAATACTGTAGGAGGTAGGAGCATACTCTTTATAGAAAATACAGTGTGGCTGATGAATCTGATTGATGTGCTGAGATAAGCTACCTTGTATTCCTCAAATTCTCTTGTCTCAGGGCTGTTGGAATGGAGCATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTGAACAATAACATTTCTAGATATCAAAAGGAAATGGAATGTGAGTTATCCTTTGTGGCAGTATTTAAGGAATGCAACCATTCTTAATTATTTTCTCTTCACTTATATTATTAGATGTATATTGTTCATTATTGTTACGAGAATGGTTTTTCTACATTCATATGTTTCTGGTACATGAATATTTAAGCAACATGGCTTTGCCTTCTCGGTAAAGTAACCTGATATAAGAAAATCCAAGCGGCTAACATTTGAAGATAAAGGTTGACTCATGAGATGGCTGTGAAAAATTGACTGGATTCCACCATTTTCCTCTATATACGATTGTTTGATTGTAAATGTTTTTTTTTTCATCATCTGTTTTTTGGCTTGATGCAGCAAGAAAGAGATTTATTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTGTATCTCAGGGCCTTGGAAGTGGCTAAGGAGAAAAAAGACGTGCAAAAAAGGTTACAGTTGTGGCCTTTAATTTCATGAAGCTGCCATTTTGAGATTTCAATTTTTGATCTATTTTCTTTCTTTCTGGTGACTAATAAGGTTTTTGGTGCATTACCTGCAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTCGAAAGGGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGCCCCTTCACAGCAGAAGAAGAAGATGAATTTGTTAAAAAGGTTGATATACTGTATGTTTCAACTTTTAAGCCCTGGATTCCATCTTGCACTTGAATCGCCCCTTCTCCTGCTAATTTTTTCCTTATGATTTCTCCTGTTTTTCTTATGATTTCTTCTGCTATTTTTTAAGTAGTTCTTGTTCTTCTTTCTTCCAATTGAATGATGCTATAATTTCCCAATCTCCGGTCTTAGGGTTTTTTTTCTTTTGGTCTTTCTAATTTCAGCAAAGAGTGAAGGCTGCAAGTTCTGCTGAGCATATGAAAGTGCTTGCAGTTGAGTCTTCAAGTGCTGACTCTCATTTTCAGCAACTGGACAAGCTCCGCATGGTTTTTGAAGAACACATCAAACTAAGCAATGAAACAATTCCTAATGCAGAGAAAGTACTTCATCAGCTTAATGAAGAGTTGGATGAAAAGTCACAGGCCTTTGATGATGTAATTGCCATATCACCTTTTACGTGCTGCCTCTTCATTCTTTTTTTTTTTTTTTTGTCGTTCTTCTCCTTTTTCTTATTTACTATATTTACGTAGCATGATGTCTCTCTTTACCTGTAGGTGGTGGGTGTCTTAGCTCATGTAAAGGCTGACCGGGACGCAGTTGAGAACTTGGTGCAACCTATTGACACTGCTGACAGGCTTTTTCAAGAAATTCAAACTTTGCAAAAGCAAGTTGATGATTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACAATGGAAGAAATTCAGTCTGAGCTGAATGCATTGCAAAACACCAAGTAACTAACTCACTTTCATGTTTCCATTTGCCTTTCTTCCACTTTCGCTGTTGTTGTTTGCAATTCCTTTTAAGTCAACTACTTATTTTTCTATACTCTCTATTATAGCTGATCTTTTTCTTATTTTTCAAATTTATTGAATAACTTTTTTCTATTTTCTGGGAAACAGAGATGGTTTACACAATGAACTAGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGTCAAACATTCAGATAAGATGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATGTGAAGAAGGCAGAAGAAGAGTTGGACCGTCTGACTGAGGAAAAAAGTCAAGTTGATCTTGATGAGAAGGTAGTTTTTTTCTCTCGGTAGGGAAACAAAGAAAATATGAATTAAAAAGACAAATTTCAAAGATGCAAGAGGTTAAGGAGTTGTCTTATAAAAATATATTGCAAATATGAGGTAAAAGAACCAAAATATAAAAAGTTCACATTCTTATACCAACAGCGAGTGGGAAATAAACTCTAACCCGTACAGCATTAACAATCTCACAGTTCTTTCTAAAAGTTATTGTTTTCCTCCAAAATAAATGACTTGATTTTAAGAAAGGAAGTGATGATAGATTCACGTGATCTTCAATAAAGAATACTACATCATGGAAACGGAGTATAAAACAACCTTGTCATTTACAACAAGTCTCAAGCACTGAATCATTCCAAAACTGAGATACAAAGGGATAACAAACATCTTAAGGGATCAGTTTAGACTAAACATTTAAGGCTAAAACTAAGTGACGAAGAATCAGACACAATGAAATGAATAGAGTGGTCTGTAAAGAACTACATGAAAACTTGAACTACTTGAGTTTTATATCATGAACAAAATATGTAACCGAATTCAGCAAGCTTGGAATGTTTAAATTTTGATAATTGGTGTGACCGTTTTATGAAATTCACGTAGTCTTAGGGGCATCTTTTGATAATAGATAAGGGAATATGTTATTGCAAGGTTTATGGGCTTGTCTGCCAATCTCTTGCACGTATTTAGAAATGGTGAACAATGGAACTGATAATTTATATGGTTGGAGAATTGAGGTCATAGCTATTGAAGTCTATTAAAATGTTTATCAAAGTGATTGGAAGCTAGATGTTTAGAATTAACCGCCAAATCTAGAAAAGAAGCCGAGTACGGCATCTTGGTGGATCAGTTGCTTAGATTTAAAATATTCGTTCTCTTTTTCTCATCATTGCGGAACTTCTTTGTCCGACTTCTCATTTTATATTACAAAATAAAATATAAAAGTAGACAAGAAAATGCAAAGGTGACTTAGTTTCTACGTAACAGTTTACATGCCTTTGACCAATGGTAGGACTTAATTATGTTATAGAATAGAGAGGCACTTGAAATTGCTGTGCCAATAAAATGTCATGGAGAATGATTGAATGCTAAAAGTTTCTGAATGAAGATAATAATTTTTTGCTTTGTCCTATTTATTTTCTGATCTGGTCTGATCTTTAGCTTCCCTTGTTTCTAACCATTTTATAGTGATGACCTTTCCTGCACTTGCAGCATTTGGCAGAAGCAATTGTCCCTTTGTCAAAGGAGAAAGATAAATTACTTAACGACTATAATGAACTAAAAGAAAAGCTTAATCGTGAATACGAGGAACTGGGTGAGAAAAAGAGGAATTTCCAACAGGAAGTTGAGACACTTCTTAGAACAGCTTCTAAGATTAAGGAGTACGTGCATCGAGTTCTAAAGTGATCTAAATTTTCTTTCATGCCTTCAAAGCTGATGTTTGGTTTTATACTACAAGGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTACAGGAAAAGAAAGCTCAGGCTGAATCTCAACTTCAAAGTTGCGACATTAGGAAGCAGGAAATATCAGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGACAACTTGAACTACCGGAAAACAAAGGCTGAAGTTGACGAGCTTGCCCGTGATATCGAATCATTGGAAGAGCAAATTTTAAAGATTGGAGGGGTTTCAACCATTGAGGCTGAAATTGGAAAGCTCTCACAGGAAAGAGAGAGGCTTTTGTCTGAGGTTTTTTCCTTTCTTCTGCCTACTCATATGAAATCTTTTTCTTTTCCATCTATGTTGTGCAATCAATTAATCTTTAGGTGATATGTATTTCACTGATACACATGGCTTTAATATTTGGAATCACAGGATTTTTTGCTTATTGGATAATTATATTGGAACTGATCAGTGTGGAGACTAGCTAGAATTTGCAAGGGGGTGAAAGGGCAAGGCCATGTACTTTATGAGTTGTGGGAATGGAGAATGAGACTGAACTACTTTGAGTTATAGGAAAAGCAGACATTAATTTTGCTTGGGCTAGAGATGTTAACTTTTCTTGAGCAAGTACAATCTTGGTTTGATAGAGATAGGGTGCATTTTCCCATAAATTAGAAAGTCAATACATAGGGTAGAGTTGAGTTCTACCATCATTTATGAAATTTCCAGTTAAATAATTGATATTTATTTAAGATAGTGTTAAGATATTTGAGTTTGAATTGTGAACGTCCTTATTGATTTTGGCATTTCTTAAACTATTCTCTATTGGTGGCTTGACCTTTTTTAGTATCACGATTTTTTCTCCAACTCATTAGTTATATAGAAGTACTTGACATCCATCGTTTCCTTTTTCCTGAATGGTTGTGTATAAATCTTTTAACAGCTAAACAGGTGTCATGGGACAATGTCTGTCTATCAAAGCAATATTTCAAGAAATAAAATTGATTTGAAACATGCCCAATATAAGGACATTGACAAGCGATACTTTGATCAGCTAATCCAGCTTAAGGTTTGATTTTTTTTTTTCAGCTGCAAATATGTGGTGCTTTTCTAATTTAGTTTTACTGATAACCCTAAGACTTTATGACAGACAACTGAGATGGCAAACAAGGACCTGGACAGATATTACAATGCCCTTGACAAGTGAGCTTCTAAAATTACTTCTAATTTTTATTAGTTCTTCTACCTATCAATATTGTTTTTTTTATTGGCAAGAAATTCCTCACTGTCTGTGTCATCATTACCATTCTTTTACCGATGATCAATTCCTCGTTACCATTTTTTAAGCAAGCCTGGAGTTCGATGCAGTTTTAAATTAAAGAATCTCTGTTTTTAGTGCTTATTAGAAATGTTATGAAATAATTCTATTTTCTCTCTTATTAAACTTGCTACTCAAATCATTCTTCATATTTTCTGAGCTCACCTAGACCTACCAATTTTGGTTCTCTCGCTGCTGCAGCAATGCATGGAAGTTGTATTCAGAATTTTGAGAAAGAGGAAAAGACATTCAAGCCTGTAACTTGCAATTTTTTGGTGATAGAAAATCCTCGACATGCACTGTTTATTGATGATTTCTACAAATCCATTATTCAATAAATCATTATATGTTGAGTTTTAAGTAAAGATGAATATTCAGCAGTTTGGTTCATGGATAGATTAATTAGAGTTCTGATATTTTCACCGTTTATATTTATATTTTGTGACTTTATTTCAGAGCACTCATGCGCTTTCACACGATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCATTCAGATTCCGAGGGTGCAGGAACTCGTTCATACAGCTACAAGGTCTGCAAGATTTCTAGCAGTTGTCGGTATTCTTTTTTACCATATACTCAACATTAGTAGTGTATACTATTCAGGTTCTCATGCAGACTGGAGATGCTGAATTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTGGGATCCAATTTTATTCTTTTGCTTATTCCTTGCCCCTTTTTGGTTGGAAGAATTAGTGCTAATAGTGAAGTTACAGGTTCTTGCTTCACTTATAATTCGATTAGCATTGGCCGAGACGTTTTGCCTCAACTGCGGAATACTCGCTCTAGATGAGCCAACCACTAACCTAGATGGTCCAAATGCTGAAAGTCTTGCTGCAGCTCTTCTGCGGTATTTATAGATTTATGCATTCATTTTAATTTATTCTGATTCAGCTTTTATTTCAAGTTCCAACCAATTTAAAGAACTCTAATTGAGCCAAAATGCAAATGGAAACTGCCTTTGCGACCAAACATATTTTAGGTACTACTCATTCCATTTGTTTTTCTGCAGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATTGGTCAGAGGCAGCATGCGGAGAAATATTATCGAGTTATGAAAGACGACCAGTATGGCTCTTTCTATATGTGTATCTATGTGGTGTATTTTATGGTTGTCATTTGTTTATCACCTGAATCTTTTCACCACTGATTTGTCTACTTCTGCTTTACAGTCAGCATAGCATTATTGAAAGCCAGGAGATATTTGATTGAAGCCATGGAAGAATGTTAGAATTTTCAATTGAATTTGAGCAGCAGCAAGTTGAAGAATGGATCTGTATGGAAACAGGTCAGTTTACAAACCCAGAATTGAGTAATGCTTTGCTTCAAAATTAGTGGCATAATCTATTGGTTTCACAACGGAGTGATAGGAACCGGATAAATAAATACAAAAAAGATAACTATCAAGTAATTCTAGGTATTTGGACCCTCCCCGAGTATCCTTGTACATATATTCATATATGAATTAAATTTATCTAACTCATTAGTTTAAGCTTATGAGTTGAGTGATGGTTTATTCATTTTTTAACATAGCATCAGAGCAAGAGATTCCGTGTTCGAACTCCTCCATTTTATAATAATTTCCACTTATTGGGTGAACAAGTGAGGGGAGTGTTGAGATATCCAGTAATCTACCCAATCCATCAGCTTAAGTTTTTGGGTTAACATATCCTTGATGCTCTAATAGCATTCCCGTAAGGGAACTTTATTTAAACAAACTCTGATTCCCTGGGAGTGAGACATCCCTCCTATTAAATTCATACATACGTAAATATAATTACAACTTTCTTTAAGTTCTAAACCTAAAGTGAAAATTACAAACACGAACCTAGCTCAACTAGTCAAGGACTTGTTTTTTCGAAGGTTATAAAAAAAAAAAGAGCGAAGATTCAAATGAACGATCTTTGAAAGAGGTTATAATACTCTAATTGATTGAATTACTACTGGATAAATATGAATTATTATACCCTTTTATTTTAGCAAAAAACAGTAGTTTCTATTAAATTTCGTGATGTTTGGATATTTTAGATTATAAAGTCTTCATTTGAAAATTTCAACGATTCTAAATTGTCGTGAATCTGACGTGGATTTTTTTAGTGAATAATCAATGTTTTGGTTCTTATCAGATTGGCGAATGGTTAGGACTTCATGGTGCGGTGACATAGAAACATGACAGGCAACCAAACAAGCAACCTTAGAGTTGTTGGACAATTTGGTCCTTTCAGCTTTTTACCAACCTCACCTGATGCTGACGTGTACCGACCCCTCCAATCAACTTGCGAGTGTAAGCAACGACCGTTGTACTTGCCCGCACCAGAGCACAGCTCTAGTGCATTACAATTGTGTTATACGTCCCATATACTGGGATTTTAAATGATTTGTTTTTAGTTGTAATTATCTTTAGTGCTCCTTTAGAAAAATGGAACTTATTTTATGCGTTTTCAAGTATGCTCCAATAGCAAAATGATTTTATCTAATTATTATTTTTGTTATTTCAGGATTTTAGAATTTCTTTTTGTATG

mRNA sequence

CGGGCCTAAATTTGTTGTTATTCGGGCAGGTCCAAAAGTTTACGAATTGGAAGCCCAGGCCCATGAACTAACAGGTGTCGATGGTCAAAGAGTCAAAGCCAGACTCGCGCGCCATATATATATAATATAATTCCTTACCGCGACTGTCCGTCGTTGAAAACTCCGGCGATTTCTTTCTCCGATGGCGTCGGAATTACGGAGCTGAGTCATGGCGACGAGGCGACGAAGTGATACTCTGCAAGCTTCTTCCGAAGTACTTTCTTCAGTGGCAGCATTCTGAAAACCGAACCGATTCCCCACCGTGTGGAGTCTCAGAGTGGGAGAGTGAAACTCCATTCCCGCCATGGTTGCGATTGCTTACCGGCGAAGCTTTCCCGTGTGATTCTCACCTGTGGATTTTCTTGCTCTGTTGTTTTGAAAAGAATAATCGAATAGCAGAGAGAAGGAAAGATGAGTACAGTAGACAAGATGCTGATTAAAGGTATTCGGAGTTTCGACCCCGAAAACAGGAACGTCATCACCTTCTTCAAGCCATTAACTCTGATCGTTGGCCCTAATGGTGCTGGGAAAACTACCATAATTGAATGCTTGAAGCTCTCTTGCACTGGCGAGTTGCCTCCCAACGCCAGGTCTGGCCACAGTTTCATTCACGATCCTAAGGTTGCAGGAGAGACAGAGACAAAGGGGCAAATAAAACTTCGGTTTAAGACAGCGGCGGGCAAGGATGTGGTTTGTATAAGGTCCTTCCAGCTTACTCAAAAGGCTTCAAAAATGGAGTACAAAGCAATTGAGAGCGTGCTTCAGACTATAAATCCACATACCGGAGAGAAAGTTTGTCTCAGCTATAGGTGTGCAGATATGGATAGGGAAATTCCAGCTTTAATGGGTGTGTCAAAGGCTATCCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCTAACTGGCCATTGCAAGATCCTTCAACATTAAAGAAGAAATTTGATGATATATTTTCTGCTACAAGATATACGAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGCTTAGGGAAAGCATTTCTCAAGATGAAGAAAAAACAGAATCTGTAAAAAGTCAAATGCAGGAACTGGAGAAGAATATCCAAGATATTGATGCTAAAATTCATCATGCTGAAACAATCCTGAAGGATGTCCGAAAACTACAGGACCAAATATCTACTAAGACTGCTGAAAGAAGCACTTTATTTAAGGAGCAGCAGAAGCAATATGCTGCCCTTGCCGAGGAGAATGAAGACACCGATGAAGAATTGAAGGAATGGAAAACCAAGTTTGAAGAAAGGATTGCTATTTTGGAGTCTAAAGTAAGCAAGTTAGAGAGGGAGATGAACGACATGGAGACTAAAAGTTCCTTTCTTAAACAGACAATTAATGAATATATATGGGAGATAAGCAAGCTTCAAACAGAAGCTGAGGTGCACATGTCATTGAAGATCGAACGTGATTCTACTATTGAAGAACTTTTTGCAAGACATAATCTAGGTTCTGTGCCAAATACTCCTTTCAGTGACGAAGTTGCATTCAACCTAACAAATAGAATAAAATCAAGATTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGCTTTCAAATGATGTTGAGCTTAATACTGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATGTTGAGGCTCAAAAACATGCTAAAGCAGAGATTAAGAGAGGAATTATGAAACGAATTGAAGAAAAGGAGAGCGAGCGAGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAGAGTGACCTATATGGCATAGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGACTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCAGAGTTAGATAATCATAAAAAGAAGCATAGAAAAATAATAGATGAGTACAAGGACAAAATTAGAGGAGTACTGAAGGGAAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGGCTGTTGGAATGGAGCATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTGAACAATAACATTTCTAGATATCAAAAGGAAATGGAATCAAGAAAGAGATTTATTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTGTATCTCAGGGCCTTGGAAGTGGCTAAGGAGAAAAAAGACGTGCAAAAAAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTCGAAAGGGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGCCCCTTCACAGCAGAAGAAGAAGATGAATTTGTTAAAAAGCAAAGAGTGAAGGCTGCAAGTTCTGCTGAGCATATGAAAGTGCTTGCAGTTGAGTCTTCAAGTGCTGACTCTCATTTTCAGCAACTGGACAAGCTCCGCATGGTTTTTGAAGAACACATCAAACTAAGCAATGAAACAATTCCTAATGCAGAGAAAGTACTTCATCAGCTTAATGAAGAGTTGGATGAAAAGTCACAGGCCTTTGATGATGTGGTGGGTGTCTTAGCTCATGTAAAGGCTGACCGGGACGCAGTTGAGAACTTGGTGCAACCTATTGACACTGCTGACAGGCTTTTTCAAGAAATTCAAACTTTGCAAAAGCAAGTTGATGATTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACAATGGAAGAAATTCAGTCTGAGCTGAATGCATTGCAAAACACCAAAGATGGTTTACACAATGAACTAGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGTCAAACATTCAGATAAGATGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATGTGAAGAAGGCAGAAGAAGAGTTGGACCGTCTGACTGAGGAAAAAAGTCAAGTTGATCTTGATGAGAAGCATTTGGCAGAAGCAATTGTCCCTTTGTCAAAGGAGAAAGATAAATTACTTAACGACTATAATGAACTAAAAGAAAAGCTTAATCGTGAATACGAGGAACTGGGTGAGAAAAAGAGGAATTTCCAACAGGAAGTTGAGACACTTCTTAGAACAGCTTCTAAGATTAAGGAGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTACAGGAAAAGAAAGCTCAGGCTGAATCTCAACTTCAAAGTTGCGACATTAGGAAGCAGGAAATATCAGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGACAACTTGAACTACCGGAAAACAAAGGCTGAAGTTGACGAGCTTGCCCGTGATATCGAATCATTGGAAGAGCAAATTTTAAAGATTGGAGGGGTTTCAACCATTGAGGCTGAAATTGGAAAGCTCTCACAGGAAAGAGAGAGGCTTTTGTCTGAGCTAAACAGGTGTCATGGGACAATGTCTGTCTATCAAAGCAATATTTCAAGAAATAAAATTGATTTGAAACATGCCCAATATAAGGACATTGACAAGCGATACTTTGATCAGCTAATCCAGCTTAAGACAACTGAGATGGCAAACAAGGACCTGGACAGATATTACAATGCCCTTGACAAAGCACTCATGCGCTTTCACACGATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCATTCAGATTCCGAGGGTGCAGGAACTCGTTCATACAGCTACAAGGTTCTCATGCAGACTGGAGATGCTGAATTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTTCTTGCTTCACTTATAATTCGATTAGCATTGGCCGAGACGTTTTGCCTCAACTGCGGAATACTCGCTCTAGATGAGCCAACCACTAACCTAGATGGTCCAAATGCTGAAAGTCTTGCTGCAGCTCTTCTGCGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATTGGTCAGAGGCAGCATGCGGAGAAATATTATCGAGTTATGAAAGACGACCATCAGCATAGCATTATTGAAAGCCAGGAGATATTTGATTGAAGCCATGGAAGAATGTTAGAATTTTCAATTGAATTTGAGCAGCAGCAAGTTGAAGAATGGATCTGTATGGAAACAGATTGGCGAATGGTTAGGACTTCATGGTGCGGTGACATAGAAACATGACAGGCAACCAAACAAGCAACCTTAGAGTTGTTGGACAATTTGGTCCTTTCAGCTTTTTACCAACCTCACCTGATGCTGACGTGTACCGACCCCTCCAATCAACTTGCGAGTGTAAGCAACGACCGTTGTACTTGCCCGCACCAGAGCACAGCTCTAGTGCATTACAATTGTGTTATACGTCCCATATACTGGGATTTTAAATGATTTGTTTTTAGTTGTAATTATCTTTAGTGCTCCTTTAGAAAAATGGAACTTATTTTATGCGTTTTCAAGTATGCTCCAATAGCAAAATGATTTTATCTAATTATTATTTTTGTTATTTCAGGATTTTAGAATTTCTTTTTGTATG

Coding sequence (CDS)

ATGAGTACAGTAGACAAGATGCTGATTAAAGGTATTCGGAGTTTCGACCCCGAAAACAGGAACGTCATCACCTTCTTCAAGCCATTAACTCTGATCGTTGGCCCTAATGGTGCTGGGAAAACTACCATAATTGAATGCTTGAAGCTCTCTTGCACTGGCGAGTTGCCTCCCAACGCCAGGTCTGGCCACAGTTTCATTCACGATCCTAAGGTTGCAGGAGAGACAGAGACAAAGGGGCAAATAAAACTTCGGTTTAAGACAGCGGCGGGCAAGGATGTGGTTTGTATAAGGTCCTTCCAGCTTACTCAAAAGGCTTCAAAAATGGAGTACAAAGCAATTGAGAGCGTGCTTCAGACTATAAATCCACATACCGGAGAGAAAGTTTGTCTCAGCTATAGGTGTGCAGATATGGATAGGGAAATTCCAGCTTTAATGGGTGTGTCAAAGGCTATCCTGGAAAATGTGATATTTGTTCACCAAGATGAAGCTAACTGGCCATTGCAAGATCCTTCAACATTAAAGAAGAAATTTGATGATATATTTTCTGCTACAAGATATACGAAGGCATTGGAGGTCATAAAGAAGCTTCACAAGGATCAGGCTCATGAAATAAAGACTTACAAACTGAAGTTGGAGAATCTTCAAACTTTAAAAGATGCAGCATATAAGCTTAGGGAAAGCATTTCTCAAGATGAAGAAAAAACAGAATCTGTAAAAAGTCAAATGCAGGAACTGGAGAAGAATATCCAAGATATTGATGCTAAAATTCATCATGCTGAAACAATCCTGAAGGATGTCCGAAAACTACAGGACCAAATATCTACTAAGACTGCTGAAAGAAGCACTTTATTTAAGGAGCAGCAGAAGCAATATGCTGCCCTTGCCGAGGAGAATGAAGACACCGATGAAGAATTGAAGGAATGGAAAACCAAGTTTGAAGAAAGGATTGCTATTTTGGAGTCTAAAGTAAGCAAGTTAGAGAGGGAGATGAACGACATGGAGACTAAAAGTTCCTTTCTTAAACAGACAATTAATGAATATATATGGGAGATAAGCAAGCTTCAAACAGAAGCTGAGGTGCACATGTCATTGAAGATCGAACGTGATTCTACTATTGAAGAACTTTTTGCAAGACATAATCTAGGTTCTGTGCCAAATACTCCTTTCAGTGACGAAGTTGCATTCAACCTAACAAATAGAATAAAATCAAGATTAGTGGACCTTGACAAGGATATGCAAGATAAAAGGCTTTCAAATGATGTTGAGCTTAATACTGCCTGGGATTGCTACATGGATGCAAATGATCGATGGAAAAATGTTGAGGCTCAAAAACATGCTAAAGCAGAGATTAAGAGAGGAATTATGAAACGAATTGAAGAAAAGGAGAGCGAGCGAGATTCATTTGAACTTCAAATTTCTCATGTCGATCTTTCTCACATTGATGAAAGAGAAAAAAACATGCAAATTGAGGTTGAGAGAAAGACAAACCAGCTTGCTGAAAGAGAATTTGAATCAACAATACGTCAAAAGCAGAGTGACCTATATGGCATAGAGCAGAAAATTAAGGCTGTTAACAGAGAGAAGGACATAATGGCTGGTGACTCTGAGGACAGAGTAAAACTTGCTCTCAAGAAAGCAGAGTTAGATAATCATAAAAAGAAGCATAGAAAAATAATAGATGAGTACAAGGACAAAATTAGAGGAGTACTGAAGGGAAGATTTCCTCCAGAGAAGGATTTGAAAAAAGAAATCACTCAAGCACTCAGGGCTGTTGGAATGGAGCATGATGACCTAAATTCTAAATCTCGTGAAGCTGAGAAGGATGTGAATATGTTGCAGATGAAAATACAGGAAGTGAACAATAACATTTCTAGATATCAAAAGGAAATGGAATCAAGAAAGAGATTTATTGAATCCAAACTCCAGTCCTTGGATCCACACTCTTTTAGTGTTGATTTGTATCTCAGGGCCTTGGAAGTGGCTAAGGAGAAAAAAGACGTGCAAAAAAGCAAGTACAATATTGCAGATGGTATGCGTCAAATGTTTGATCCATTCGAAAGGGTTGCCCGTGCTCATCATGTTTGCCCTTGTTGTGAGCGCCCCTTCACAGCAGAAGAAGAAGATGAATTTGTTAAAAAGCAAAGAGTGAAGGCTGCAAGTTCTGCTGAGCATATGAAAGTGCTTGCAGTTGAGTCTTCAAGTGCTGACTCTCATTTTCAGCAACTGGACAAGCTCCGCATGGTTTTTGAAGAACACATCAAACTAAGCAATGAAACAATTCCTAATGCAGAGAAAGTACTTCATCAGCTTAATGAAGAGTTGGATGAAAAGTCACAGGCCTTTGATGATGTGGTGGGTGTCTTAGCTCATGTAAAGGCTGACCGGGACGCAGTTGAGAACTTGGTGCAACCTATTGACACTGCTGACAGGCTTTTTCAAGAAATTCAAACTTTGCAAAAGCAAGTTGATGATTTGGTCTACAAGCTTGATTTTCGAGGGAAAGGTGTGAAAACAATGGAAGAAATTCAGTCTGAGCTGAATGCATTGCAAAACACCAAAGATGGTTTACACAATGAACTAGAGAAGCTAAGGGATGAACAAAGATATATGGAAAATGATTTGTCAAACATTCAGATAAGATGGCACACTCTAAGAGAGGAAAAAGTGAAAGCAGCTAATACTTTGCGTGATGTGAAGAAGGCAGAAGAAGAGTTGGACCGTCTGACTGAGGAAAAAAGTCAAGTTGATCTTGATGAGAAGCATTTGGCAGAAGCAATTGTCCCTTTGTCAAAGGAGAAAGATAAATTACTTAACGACTATAATGAACTAAAAGAAAAGCTTAATCGTGAATACGAGGAACTGGGTGAGAAAAAGAGGAATTTCCAACAGGAAGTTGAGACACTTCTTAGAACAGCTTCTAAGATTAAGGAGTATCTTGATTTAAAGAAAGGTGAGAGGCTGAAAGAACTACAGGAAAAGAAAGCTCAGGCTGAATCTCAACTTCAAAGTTGCGACATTAGGAAGCAGGAAATATCAGCTGAATTAAACAAAAGTAAGGACTTGATGCGGAATCAAGATCAATTAAGAAGGAATATTGAGGACAACTTGAACTACCGGAAAACAAAGGCTGAAGTTGACGAGCTTGCCCGTGATATCGAATCATTGGAAGAGCAAATTTTAAAGATTGGAGGGGTTTCAACCATTGAGGCTGAAATTGGAAAGCTCTCACAGGAAAGAGAGAGGCTTTTGTCTGAGCTAAACAGGTGTCATGGGACAATGTCTGTCTATCAAAGCAATATTTCAAGAAATAAAATTGATTTGAAACATGCCCAATATAAGGACATTGACAAGCGATACTTTGATCAGCTAATCCAGCTTAAGACAACTGAGATGGCAAACAAGGACCTGGACAGATATTACAATGCCCTTGACAAAGCACTCATGCGCTTTCACACGATGAAAATGGAGGAAATAAATAAAATTATAAGGGAGTTGTGGCAACAAACATATAGGGGACAGGATATAGACTATATAAGTATTCATTCAGATTCCGAGGGTGCAGGAACTCGTTCATACAGCTACAAGGTTCTCATGCAGACTGGAGATGCTGAATTAGAAATGAGAGGAAGGTGCAGTGCTGGTCAAAAGGTTCTTGCTTCACTTATAATTCGATTAGCATTGGCCGAGACGTTTTGCCTCAACTGCGGAATACTCGCTCTAGATGAGCCAACCACTAACCTAGATGGTCCAAATGCTGAAAGTCTTGCTGCAGCTCTTCTGCGAATCATGGAGGACAGGAAAGGGCAGGAGAACTTTCAGCTCATAGTAATTACACACGACGAGCGTTTCGCTCAGCTAATTGGTCAGAGGCAGCATGCGGAGAAATATTATCGAGTTATGAAAGACGACCATCAGCATAGCATTATTGAAAGCCAGGAGATATTTGATTGA

Protein sequence

MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKSQMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSNDVELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNSKSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEVAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRNFQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERERLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD

Homology

[Close]

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot
Match: Q9SL02 (DNA repair protein RAD50 OS=Arabidopsis thaliana OX=3702 GN=RAD50 PE=1 SV=2)

HSP 1 Score: 1946.4 bits (5041), Expect = 0.0e+00
Identity = 1005/1316 (76.37%), Postives = 1162/1316 (88.30%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPEN+NV+TFF+PLTLIVG NGAGKTTIIECLK+SCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETK QIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDE+NWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQA EIKT+KLKLENLQTLKDAAYKLRESI+QD+E+TES K 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKV 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QM ELE ++Q +DA++H+ E +LKD+RKLQDQ+S KTAERSTLFKEQQ+QYAAL EENED
Sbjct: 241  QMLELETSVQKVDAEVHNKEMMLKDLRKLQDQVSIKTAERSTLFKEQQRQYAALPEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            T EELKEWK+KFEER+A+L +K+ K+EREM D ET  S L      Y+ EISKLQTEAE 
Sbjct: 301  TIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNYMLEISKLQTEAEA 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HM LK ERDSTI+ +F  +NLG+VP+TPFS EV  NLTNRIKSRL +L+ D+ DK+ SN+
Sbjct: 361  HMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEVVLNLTNRIKSRLGELEMDLLDKKKSNE 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
              L+TAWDCYMDANDRWK++EAQK AK EIK GI KRIEEKE ERDSFE +IS VD+   
Sbjct: 421  TALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDSFEFEISTVDVKQT 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREK +Q+E+ERKT Q +ER FES I QKQ ++Y +E KIK +NRE+D+MAGD+EDRVK
Sbjct: 481  DEREKQVQVELERKTKQNSERGFESKIEQKQHEIYSLEHKIKTLNRERDVMAGDAEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            L+LKK E +N KKKH+KIIDE KD+IRGVLKGR PPEKD+K+EI QALR++  E+DDL+ 
Sbjct: 541  LSLKKTEQENLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQALRSIEREYDDLSL 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEK+VNMLQMKIQEVNN++ ++ K+ ESRKR+IESKLQ+L   S ++D Y + LE 
Sbjct: 601  KSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLES 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AK+K+D +K +YN+A+GMRQMF+PFE+ AR  H CPCCER FTA+EE  F+KKQRVKA+S
Sbjct: 661  AKDKRDDRKREYNMANGMRQMFEPFEKRARQEHSCPCCERSFTADEEASFIKKQRVKASS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            + EH+K LAVESS+ADS FQQLDKLR VFEE+ KL+ E IP AEK L +  EEL +KS+A
Sbjct: 721  TGEHLKALAVESSNADSVFQQLDKLRAVFEEYSKLTTEIIPLAEKTLQEHTEELGQKSEA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDV+G+ A +KAD+D++E LVQP++ ADR+FQEI + QKQ++DL YKLDFRG GVKTME
Sbjct: 781  LDDVLGISAQIKADKDSIEALVQPLENADRIFQEIVSYQKQIEDLEYKLDFRGLGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSEL++LQ++KD LH ELEKLRD+Q YME D+S +Q RWH +REEK KAAN LRDV K
Sbjct: 841  EIQSELSSLQSSKDKLHGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEE+L+RL EEKSQ+DLD K+L EA+ PLSKEK++LL+DYN++K + N+EYEEL EKKRN
Sbjct: 901  AEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRN 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            +QQEVE LL+ + KI EY DLKKGERL ++QEK+  ++SQLQSC+ RK E++ ELN++KD
Sbjct: 961  YQQEVEALLKASYKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNELAGELNRNKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYR TKA+V+EL R+IESLEEQIL IGG++ +EAEI K+ +ERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIAAVEAEIVKILRERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNRC GT+SVY+S+IS+N+++LK AQYKDIDKR+FDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQD+DYI IHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GD ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN+ESLA ALL
Sbjct: 1201 GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1317
            RIMEDRKGQENFQLIVITHDERFAQ+IGQRQHAEKYYRV KDD QHSIIE+QEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot
Match: Q92878 (DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.2e-164
Identity = 413/1329 (31.08%), Postives = 714/1329 (53.72%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM I G+RSF  + +++ +ITFF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ +   RS   TQK+ K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVI- 120

Query: 121  TINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFD 180
            T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL +   LK+KFD
Sbjct: 121  TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFD 180

Query: 181  DIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESV 240
            +IFSATRY KALE ++++ + Q  ++K Y+++L+ L+  K+ A ++R+ I+  E +  S 
Sbjct: 181  EIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSS 240

Query: 241  KSQMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEEN 300
            K  ++  E  +  +  ++   E  L  + KL ++I    + +  + K+  +    + +  
Sbjct: 241  KEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRKKQMEKDNSELEEKMEKVF 300

Query: 301  EDTDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEA 360
            + TDE+L +     +  +   E K+    RE+  +  +S  L Q  +E + E  +LQ +A
Sbjct: 301  QGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQA 360

Query: 361  EVHMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLS 420
            + H      RDS I+ L  +  L      PFS+    N    ++ R     K     +L 
Sbjct: 361  DRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRERQEGEAKTA--NQLM 420

Query: 421  ND-VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDL 480
            ND  E  T     +   D  ++ +       E+K  I+ + ++ E +   +ELQ      
Sbjct: 421  NDFAEKETLKQKQI---DEIRDKKTGLGRIIELKSEILSK-KQNELKNVKYELQQLEGSS 480

Query: 481  SHIDEREKNMQIEVERKTNQLAEREFESTIRQK----QSDLYGIEQKIKAVNREKDIMAG 540
              I E ++ + I+ ER+ ++  +     T++ +    Q++   +++ ++ +++E + +  
Sbjct: 481  DRILELDQEL-IKAERELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNH 540

Query: 541  DSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGM 600
             +  R ++ +   +  +  ++ RKI   + D++  +L G FP +K L+  +    + +  
Sbjct: 541  HTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLEDWLHSKSKEINQ 600

Query: 601  EHDDLNSKSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSL-DPHSFSVD 660
              D L     +  K++   +     +NN + R ++++ S     E KL  +     F  D
Sbjct: 601  TRDRL----AKLNKELASSEQNKNHINNELKRKEEQLSS----YEDKLFDVCGSQDFESD 660

Query: 661  LYLRALEVAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEE-DEFV 720
            L     E+ K  K  Q++    A  +   F   +        CP C+R F  E E  E +
Sbjct: 661  LDRLKEEIEKSSK--QRAMLAGATAVYSQFIT-QLTDENQSCCPVCQRVFQTEAELQEVI 720

Query: 721  KKQRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLN 780
               + K   + + +K    E    +    ++  L  + +  I L  + IP     L  +N
Sbjct: 721  SDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVN 780

Query: 781  EELDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDF 840
             ++       ++   +L  +  + ++ +  +  +   +R   E++ +++++     KL  
Sbjct: 781  RDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKL-- 840

Query: 841  RGKGV---KTMEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEK 900
              +G+   +T++++  E    Q+  D + +++E  R   +  +  + +++   + L+ EK
Sbjct: 841  --QGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEK 900

Query: 901  VKAANTLRDVKKAEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLN 960
            ++ +  L+  ++ EE+   L+ E   +  + K   E + PL    +K   +  EL  K N
Sbjct: 901  LQISTNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKN 960

Query: 961  REYEELGEKKRNFQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRK 1020
               +   +K  + +++V+ +      I+ Y+   K +  K+ + +  +  +QL  C+  K
Sbjct: 961  TSNKIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHK 1020

Query: 1021 QEISAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGG---V 1080
            ++I+ ++   +  +  Q    R ++DNL  RK   E+    +++E   +Q LK  G   V
Sbjct: 1021 EKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRNEEL----KEVEEERKQHLKEMGQMQV 1080

Query: 1081 STIEAEIGKLSQERERLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQ 1140
              +++E  KL +  + +    N   G    Y+  I   K +L+  Q++D +++Y + +I 
Sbjct: 1081 LQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIV 1140

Query: 1141 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSD-- 1200
            ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD  
Sbjct: 1141 MRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDAD 1200

Query: 1201 ---SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1260
               S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+AL
Sbjct: 1201 ENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIAL 1260

Query: 1261 DEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVM 1310
            DEPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ 
Sbjct: 1261 DEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIK 1299

[Close]

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot
Match: Q9JIL8 (DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.6e-162
Identity = 411/1347 (30.51%), Postives = 713/1347 (52.93%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM   G+RSF  + +++ +I+FF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSTLGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ V+  RS   +QK+ K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVLVQRSMLCSQKSKKTEFKTLEGVIT 120

Query: 121  TINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFD 180
             I    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL +   LK+KFD
Sbjct: 121  RIK--HGEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFD 180

Query: 181  DIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESV 240
            +IFSATRY KAL+ ++++ + Q  ++K  + +L+ L+  K+ A ++R+ I+  E +  S 
Sbjct: 181  EIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNKEKACEIRDQITSKEAQLASS 240

Query: 241  KSQMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEEN 300
            +  ++  E  ++ +  ++   E  L  + +L ++I    + +  + K+  +    + +  
Sbjct: 241  REIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVF 300

Query: 301  EDTDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEA 360
            + TDE+L +     +  +   E ++   +RE+  +  ++  L Q   E + E  +LQ +A
Sbjct: 301  QGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEARLLNQERAELLVEQGRLQLQA 360

Query: 361  EVHMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLS 420
            + H      RDS I+ L A   L      PFS+    N    ++ R              
Sbjct: 361  DRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFHELVRER-------------- 420

Query: 421  NDVELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHV--- 480
             + E  TA     D  D+    + Q     + K G+ + IE K       + ++ +V   
Sbjct: 421  QEREAKTASQLLSDLTDKEALKQRQMDEMRDKKSGLGRMIELKTEILTKKQTELRNVRNE 480

Query: 481  --DLSHIDEREKNMQIEVERKTNQLAEREFESTIR-------QKQSDLYGIEQKIKAVNR 540
               L    +R   +  E+ +   +L++ E  S+I          QS+   +++ ++ +++
Sbjct: 481  LQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEKADLDRNLRKLDQ 540

Query: 541  EKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQ 600
            E + +   +  R ++ +   +  +  ++ RKI   + D++  +L G FP +K L+  +  
Sbjct: 541  EMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYFPNKKQLEDWLHS 600

Query: 601  ALRAVGMEHD---DLNSKSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQS 660
              + +    D    LN +   AE++ N        +NN + + ++++ S +  +     S
Sbjct: 601  KSKEINQTRDRLAKLNKELASAEQNKN-------HINNELKKKEEQLSSYEDKLFDVCGS 660

Query: 661  LDPHSFSVDLYLRALEVAKEKKDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVCPCCE 720
             D  S          ++ + K+D++KS    A   G   ++  F  +        CP C+
Sbjct: 661  QDFES----------DLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPGCQ 720

Query: 721  RPFTAEEE-DEFVKKQRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNE 780
            R F  E E  E +   + K   + + +K    E    +    ++  L  + +  I L  +
Sbjct: 721  RVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEK 780

Query: 781  TIPNAEKVLHQLNEELDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTL 840
             IP     L  +N ++       ++   +L  V  + ++ +  +  +   +R   E++ +
Sbjct: 781  EIPELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDV 840

Query: 841  QKQVDDLVYKLDFRGKGV---KTMEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLS 900
            ++++     KL    +GV   +T++++  E    Q+  D + +++E  R   +  +  + 
Sbjct: 841  ERKIAQQAAKL----QGVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQ 900

Query: 901  NIQIRWHTLREEKVKAANTLRDVKKAEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDK 960
            +++ + + L+ EK++ A  L+  ++ EE+   L+ E   ++ + K   E I PL    +K
Sbjct: 901  HLKSKTNELKSEKLQIATNLQRRQQMEEQTVELSTEVQSLNREIKDAKEQINPLEIALEK 960

Query: 961  LLNDYNELKEKLNREYEELGEKKRNFQQEVETLLRTASKIKEYLDLKKGERLKELQEKKA 1020
            L  +  EL  + N   +   +K  + +++V+ +      I+ Y+   K +  K+ + +  
Sbjct: 961  LQQEKEELIHRKNTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELN 1020

Query: 1021 QAESQLQSCDIRKQEISAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESL 1080
            +   QL  CD  K++I+ E+   +  +  +    R ++DNL  RK + E+    +++E  
Sbjct: 1021 EVVIQLNECDKHKEKINKEMGTMRQDIDTKKIQERWLQDNLTLRKRREEL----KEVEEE 1080

Query: 1081 EEQILKIGG---VSTIEAEIGKLSQERERLLSELNRCHGTMSVYQSNISRNKIDLKHAQY 1140
             +Q LK  G   V  ++ E  KL +  + +    +   G    Y+  I   K +L+  Q+
Sbjct: 1081 RKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEEEILHFKKELREPQF 1140

Query: 1141 KDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1200
            +D +++Y + +I ++TTE+ NKDLD YY  LD A+M+FH+MKMEEINKIIR+LW+ TYRG
Sbjct: 1141 RDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKIIRDLWRSTYRG 1200

Query: 1201 QDIDYISIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1260
            QDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLAL
Sbjct: 1201 QDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLAL 1260

Query: 1261 AETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLI 1315
            AETFCLNCGILALDEPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+
Sbjct: 1261 AETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 1304

[Close]

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot
Match: P70388 (DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.9e-161
Identity = 409/1342 (30.48%), Postives = 711/1342 (52.98%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSF--DPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 60
            MS ++KM I G+RSF  + +++ +I+FF PLT++VGPNGAGKTTIIECLK  CTG+ PP 
Sbjct: 1    MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60

Query: 61   ARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQ 120
             + G++F+HDPKVA ET+ + QI+L+F+   G+ V   RS   +QK  K E+K +E V+ 
Sbjct: 61   TK-GNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRSMLCSQKNKKTEFKTLEGVIT 120

Query: 121  TINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFD 180
             +    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL +   LK+KFD
Sbjct: 121  RMK--HGEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFD 180

Query: 181  DIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESV 240
            +IFSATRY KAL+ ++++ + Q  ++K  + +L+ L+  K+ A ++R+ I+  E +  S 
Sbjct: 181  EIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLASS 240

Query: 241  KSQMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEEN 300
            +  ++  E  ++ +  ++   E  L  + KL ++I    + +  + K+  +    + +  
Sbjct: 241  QEIVRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVF 300

Query: 301  EDTDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEA 360
            + TDE+L +     +  +   E ++   +RE+  +  ++  L Q   E + E  +LQ +A
Sbjct: 301  QGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEKAELLVEQGRLQLQA 360

Query: 361  EVHMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLS 420
            + H      RDS I+ L     L      PFS+    N    +K R              
Sbjct: 361  DRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKER-------------- 420

Query: 421  NDVELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHV--- 480
             + E  TA     D  D+    + Q     + K G+ + IE K       + ++ HV   
Sbjct: 421  QEREAKTASQLLSDLTDKEALKQRQLDELRDRKSGLGRTIELKTEILTKKQSELRHVRSE 480

Query: 481  --DLSHIDEREKNMQIEVERKTNQLAEREFESTIR-------QKQSDLYGIEQKIKAVNR 540
               L    +R   +  E+ +   +L++ E  S+I          Q++   +++ ++ +++
Sbjct: 481  LQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEVMSLQNEKADLDRSLRKLDQ 540

Query: 541  EKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQ 600
            E + +   +  R ++ +   +  +  ++ RKI   + D++  +L G FP +K L+  +  
Sbjct: 541  EMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYFPNKKQLEDWLHS 600

Query: 601  ALRAVGMEHD---DLNSKSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQS 660
              + +    D    LN +   AE++ N        +NN + + ++++ S +  +     S
Sbjct: 601  KSKEINQTRDRLAKLNKELASAEQNKN-------HINNELKKKEEQLSSYEDKLFDVCGS 660

Query: 661  LDPHSFSVDLYLRALEVAKEKKDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVCPCCE 720
             D  S          ++ + K++++KS    A   G   ++  F  +        CP C+
Sbjct: 661  QDLES----------DLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQ 720

Query: 721  RPFTAEEE-DEFVKKQRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNE 780
            R F  E E  E +   + K   + + +K    E    +    ++  L  V +  I L  +
Sbjct: 721  RVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPVRQSIIDLKEK 780

Query: 781  TIPNAEKVLHQLNEELDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTL 840
             IP     L  +N ++       ++   +L  +  + ++ +  +  +   +R   E++ +
Sbjct: 781  EIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDV 840

Query: 841  QKQVDDLVYKLDFRGKGV---KTMEEIQSELNALQNTKDGLHNELEKLRDEQRYMENDLS 900
            ++++     KL    +GV   +T++++  E    Q+  D + +++E  R   +  +  + 
Sbjct: 841  ERKIAQQAAKL----QGVDLDRTVQQVNQEKQEKQHRLDTVTSKIELNRKLIQDQQEQIQ 900

Query: 901  NIQIRWHTLREEKVKAANTLRDVKKAEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDK 960
            +++ + + L+ EK++ A  L+  ++ EE+   L+ E   ++ + K   E I PL    +K
Sbjct: 901  HLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREIKDAKEQISPLETALEK 960

Query: 961  LLNDYNELKEKLNREYEELGEKKRNFQQEVETLLRTASKIKEYLDLKKGERLKELQEKKA 1020
            L  +  EL  + +   +   +K  + +++V+ +      I+ Y+   K +  K+ + +  
Sbjct: 961  LQQEKEELIHRKHTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELN 1020

Query: 1021 QAESQLQSCDIRKQEISAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESL 1080
                QL  C+  +++I+ ++   +  +  Q    R ++DNL  RK +   DEL +++E  
Sbjct: 1021 GVAVQLNECEKHREKINKDMGTMRQDIDTQKIQERWLQDNLTLRKRR---DEL-KEVEEE 1080

Query: 1081 EEQILKIGG---VSTIEAEIGKLSQERERLLSELNRCHGTMSVYQSNISRNKIDLKHAQY 1140
             +Q LK  G   V  ++ E  KL +  + +    +   G    Y+  I   K +L+  Q+
Sbjct: 1081 PKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEDEILHFKKELREPQF 1140

Query: 1141 KDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1200
            +D +++Y + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRG
Sbjct: 1141 RDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRG 1200

Query: 1201 QDIDYISIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1260
            QDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLAL
Sbjct: 1201 QDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLAL 1260

Query: 1261 AETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLI 1310
            AETFCLNCGILALDEPTTNLD  N ESLA AL+ I++ R  Q NFQL+VITHDE F +L+
Sbjct: 1261 AETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 1299

[Close]

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot
Match: Q54CS9 (DNA repair protein RAD50 OS=Dictyostelium discoideum OX=44689 GN=rad50 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 8.6e-161
Identity = 408/1368 (29.82%), Postives = 721/1368 (52.70%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            M++++K+L++GIRSFDP   +VI F+ PLTLIVG NGAGKTTIIECLK +CTGE+PPN  
Sbjct: 1    MTSIEKLLVQGIRSFDPREASVIDFYSPLTLIVGQNGAGKTTIIECLKYTCTGEMPPNCS 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKAS-KMEYKAIESVLQT 120
            SG +FIHD K+AGE+E K QIKLRFK   GK +V  RS  L QK++ K EYK I++ LQ+
Sbjct: 61   SGQAFIHDTKIAGESEVKAQIKLRFKNPIGKPIVASRSLSLIQKSNKKQEYKQIDASLQS 120

Query: 121  INPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDD 180
                 G+KV  S+RC+DMD+EIP LMGV+K IL++VIF HQ+++NWPL + + LK KFD+
Sbjct: 121  YT-SDGQKVSKSFRCSDMDKEIPDLMGVAKPILKHVIFCHQEDSNWPLSESAKLKLKFDE 180

Query: 181  IFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVK 240
            IFSA +YTKAL+ +K   K+    IK  KL+LE +    +   ++R+ + + EE   +  
Sbjct: 181  IFSAVKYTKALKSLKDKRKELTTLIKELKLRLETISANIEHCNRIRKELIKAEEIYSNGN 240

Query: 241  SQMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAE-EN 300
              +++++  I +    +   +     +++L+++++   A +  + + + + + +L E   
Sbjct: 241  KSLEDIKIAIIEKQKTLSTIKIAESKLQELKNEVTVLNARKLEMERVKNQLFNSLTEVYQ 300

Query: 301  EDTDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEA 360
             +TDEEL   +++F      + +   +L      + ++   +   I E   +  +LQ+  
Sbjct: 301  NETDEELVFMQSEFNRECETMATAEKELLENSEVLLSQKEVINNLIKENSSQKGRLQSLI 360

Query: 361  EVHMSLKIERDSTIEELFARHNLGSV--PNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKR 420
                S+  +RD  ++EL  R+ +        P+  E+     N I  +   L   + +  
Sbjct: 361  SQQDSILSDRDKQMKELVTRYKMSDFIQIQLPYQKEIVIKFINEITQKFDTLTSGISNYS 420

Query: 421  LSNDVELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVD 480
             +N  +LN      M  N   K V++ +   +  ++     +  K+ +    E+Q     
Sbjct: 421  KTNKQKLNA---IQMKINQ--KRVDSNQFTSSSNEKMSTITLNSKKIQSLDQEIQQHTNS 480

Query: 481  LSHIDEREKNMQI---EVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAG 540
            +  ID  EK +Q    E+    +    +E + ++    ++   IE++I+++     ++  
Sbjct: 481  IGEIDTLEKQIQFSQSELSILKSDANLQEIQQSLDNLTTEKLEIEKEIQSLQSSLKLLNL 540

Query: 541  DSEDRVKLALKKAEL-DNHKKKHRKIIDEYKDKIRGVLKGRFPPEK-----------DLK 600
             +  R +L +K+ E+  N +  + ++  +  + I  +L   F  +            ++ 
Sbjct: 541  QASSRTRLNIKRKEIQQNQQNINSQLNSQIINSINLILPNEFNNDNNNDDDDDQFRFNII 600

Query: 601  KEITQALRAVGMEHDDLNSKSREAEKDVNMLQMKIQEVNNNIS--------RYQKEMESR 660
            + I   +  +  +     ++  E ++   +LQ K  +++  ++        + Q E+ES 
Sbjct: 601  QRIEPIVPLINKKRLIFTNQLNELKQQFQILQNKKNQIDAQLTSSIEPQLKKKQIELESY 660

Query: 661  KRFI-ESKLQ---------------SLDPHSFSVDLYLRALEVAKEKKDVQKSKYNIADG 720
            ++ I +SKL+               + + +  +V L+   +   K   +  +  + + + 
Sbjct: 661  EKLINDSKLKQSNLFENVNSNNNNNNNNNNGITVLLFENKINEMKLSLEKLEKSFIVLES 720

Query: 721  MRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVESSSADS 780
               ++  +   A     C  C+      E   FV             +K L +E S++  
Sbjct: 721  EDILYKEYIEKANQDKECSLCKNEMNGNELTSFVHTLETHCNDIPNQLKQLKIEISNSKI 780

Query: 781  HFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQAFDDVVGVLAHVKADRDA 840
              ++ +KL  +  +  +L  ++IP  ++    L E+  + ++   +    +  +++    
Sbjct: 781  QLEKFNKLLPIIVKREELIEKSIPELKESQKNLLEQQLKSNEMVLEKQNQIESLESQSVL 840

Query: 841  VENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTMEEIQSELNALQNTKDGLH 900
             + +       D+  Q IQ+++ ++     ++  +   ++T+EE+  +L   Q     + 
Sbjct: 841  YQQVTLVFQYIDQTKQSIQSIESEIQKEEKEIMKQSSDLRTIEEVDKDLEIQQEQLKTIE 900

Query: 901  NELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELDRLTEEK----- 960
             E+    ++Q+       N QI       + +   N L  +K A   +D L + K     
Sbjct: 901  KEISNFTNKQK-------NDQIGIFEKERQLISIKNQLTTIKSASGIIDHLRDTKKELQS 960

Query: 961  --SQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRNFQQEVETLLR 1020
               Q+ L+ ++L ++I   + +  +L N++ +L+ +  ++ +   ++K  F   ++++  
Sbjct: 961  NNQQLQLEIENLQQSIDQSNNDAKQLENEFQQLEIEFEKKIDAYSKEKNTFSVRLDSINS 1020

Query: 1021 TASKIKEYLDLKKGERLKELQEKKAQAESQLQSCD----IRKQEISAELNKSKDLMRNQD 1080
              SKI +  +L K  +L E+QEK  + ES L +      I +Q IS      +  + ++D
Sbjct: 1021 LQSKILDPSELCK--QLNEIQEKNQELESNLSTLSQDYLIGQQHIST----IQQNLSSKD 1080

Query: 1081 QLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERERLLSEL 1140
              +R I DN+++R+ K  V+++ R I S + +++K    S +E +  KL QE   L S+ 
Sbjct: 1081 ITKRAISDNISFRQHKNNVEQIIRQI-SRKNELIKEMMQSQLEIDSNKLEQEINSLKSKF 1140

Query: 1141 NRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKA 1200
            ++  G  +V QS I+ N+ +L    YK+ID    D LI+L+TTE   KDLD+YY ALDK+
Sbjct: 1141 DQITGQTAVLQSQINSNRQELSKPTYKNIDDVNKDLLIKLQTTETVGKDLDKYYKALDKS 1200

Query: 1201 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELE 1260
            LM++HT+KM+EIN+ I+E+WQ TY+G DID I I S+  G   ++ +Y+V+M  GD EL+
Sbjct: 1201 LMKYHTLKMDEINRSIKEIWQTTYKGSDIDTIEIRSEESGTANKTINYRVVMIKGDVELD 1260

Query: 1261 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDR 1315
            MRGRCSAGQKVLA L+IRLALAE FC NCGILALDEPT++LD  N ES A +LL I+E R
Sbjct: 1261 MRGRCSAGQKVLACLVIRLALAENFCSNCGILALDEPTSHLDRANIESFANSLLNIIESR 1320

[Close]

BLAST of MC05g0206.1 vs. NCBI nr
Match: XP_022146955.1 (DNA repair protein RAD50 [Momordica charantia])

HSP 1 Score: 2485 bits (6440), Expect = 0.0
Identity = 1313/1316 (99.77%), Postives = 1314/1316 (99.85%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDA  +LRESISQDEEKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDALLQLRESISQDEEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV
Sbjct: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
            FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME
Sbjct: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN
Sbjct: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD
Sbjct: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. NCBI nr
Match: XP_038891799.1 (DNA repair protein RAD50 isoform X1 [Benincasa hispida] >XP_038891805.1 DNA repair protein RAD50 isoform X1 [Benincasa hispida])

HSP 1 Score: 2413 bits (6253), Expect = 0.0
Identity = 1268/1316 (96.35%), Postives = 1293/1316 (98.25%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QM+ELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMEELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARH+LGSVPN PFSDEVA NLTNRIKSRLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKNERDSTIEELFARHHLGSVPNAPFSDEVASNLTNRIKSRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYMDANDRWKN+EAQKHAK +IKRGIMKRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMDANDRWKNIEAQKHAKVDIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIR VLKGRFPPEKDLKKEITQALR VGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRAVLKGRFPPEKDLKKEITQALRGVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVN N+SRYQKEMESRKRF+ESKLQSLDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNCNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESS+ADSHFQQLDKLRMVFEE++KL NETIPNAEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSTADSHFQQLDKLRMVFEEYVKLRNETIPNAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRD+VENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKT+E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLE 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEK QVDLDEKHL EA++PLSKEKDKLLNDYNELK+KLNREYEELGEKKR 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLTEALIPLSKEKDKLLNDYNELKDKLNREYEELGEKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI AELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. NCBI nr
Match: XP_008438322.1 (PREDICTED: DNA repair protein RAD50 [Cucumis melo])

HSP 1 Score: 2409 bits (6243), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1294/1316 (98.33%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTL+KEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINE+IWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEHIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIK RLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYMDANDRWKN++AQKHAKA+IKRGI+KRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIVKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKD+MAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDVMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELD+HKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDSHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVN+N+SRYQKEMESRKRF+ESKLQ LDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQFLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSSADSHFQQLDKLRMVFEE++KLSNETIPNAEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRD+VENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKT+E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLE 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELN LQNTKDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEK QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLNREYEELG+KKR 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI AELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVS +EAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSAVEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. NCBI nr
Match: XP_004133980.1 (DNA repair protein RAD50 isoform X1 [Cucumis sativus] >KGN56710.1 hypothetical protein Csa_010500 [Cucumis sativus])

HSP 1 Score: 2409 bits (6243), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1294/1316 (98.33%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTL+KEQQKQYAAL+EENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALSEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMND+ETKSSFLKQ INEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIK RLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYMDANDRWKN++AQKHAKA+IKRGIMKRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVN+N+SRYQKEMESRKRF+ESKLQSLDP SFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSS+DSHFQQLDKLRMVFEE++KLSNETIPNAEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRD+VENLVQPIDTADRL+QEIQTLQKQVDDLVYKLDFRGKGVKT+E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLE 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELN LQNTKDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEK QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLNREYEELG+KKR 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI AELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSY+VLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. NCBI nr
Match: KAG6582490.1 (DNA repair protein RAD50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2403 bits (6228), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1292/1316 (98.18%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINE+IWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEHIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIKSRLVDLDKDMQDKR+SND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKSRLVDLDKDMQDKRVSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYM ANDRWKN+EAQKHAKA+IKRGI+KRIE KESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMGANDRWKNIEAQKHAKADIKRGIVKRIEAKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGR PPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRLPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVNNN+SRYQKEMESRKRF+ESKLQSLDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLA+ESSSADSHFQ LDKLRMVFEE++KLSNETIP AEK LHQLNEELDEK+QA
Sbjct: 721  SAEHMKVLAMESSSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKTQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRDAVENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKTME
Sbjct: 781  LDDVVGVLAQVKADRDAVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEE+ QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLN EYEELG+KKR 
Sbjct: 901  AEEELDRLTEERGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI  ELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAE+GKLSQ+RE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDD QHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL
Match: A0A6J1CYT2 (DNA repair protein RAD50 OS=Momordica charantia OX=3673 GN=LOC111016026 PE=3 SV=1)

HSP 1 Score: 2485 bits (6440), Expect = 0.0
Identity = 1313/1316 (99.77%), Postives = 1314/1316 (99.85%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDA  +LRESISQDEEKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDALLQLRESISQDEEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV
Sbjct: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
            FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME
Sbjct: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN
Sbjct: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD
Sbjct: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL
Match: A0A0A0L416 (Zinc-hook domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129670 PE=3 SV=1)

HSP 1 Score: 2409 bits (6243), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1294/1316 (98.33%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTL+KEQQKQYAAL+EENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALSEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMND+ETKSSFLKQ INEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIK RLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYMDANDRWKN++AQKHAKA+IKRGIMKRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVN+N+SRYQKEMESRKRF+ESKLQSLDP SFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSS+DSHFQQLDKLRMVFEE++KLSNETIPNAEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRD+VENLVQPIDTADRL+QEIQTLQKQVDDLVYKLDFRGKGVKT+E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLE 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELN LQNTKDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEK QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLNREYEELG+KKR 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI AELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSY+VLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL
Match: A0A1S3AWR7 (DNA repair protein RAD50 OS=Cucumis melo OX=3656 GN=LOC103483462 PE=3 SV=1)

HSP 1 Score: 2409 bits (6243), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1294/1316 (98.33%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTL+KEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINE+IWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEHIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIK RLVDLDKDMQDKRLSND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLDKDMQDKRLSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYMDANDRWKN++AQKHAKA+IKRGI+KRIEEKESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIVKRIEEKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKD+MAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDVMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELD+HKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDSHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVN+N+SRYQKEMESRKRF+ESKLQ LDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQFLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSSADSHFQQLDKLRMVFEE++KLSNETIPNAEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRD+VENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKT+E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTLE 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELN LQNTKDGLHNELEKLRDEQRYMENDL+NIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEEK QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLNREYEELG+KKR 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI AELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVS +EAEIGKLSQERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSAVEAEIGKLSQERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKH QYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL
Match: A0A6J1IVK4 (DNA repair protein RAD50 OS=Cucurbita maxima OX=3661 GN=LOC111479648 PE=3 SV=1)

HSP 1 Score: 2402 bits (6226), Expect = 0.0
Identity = 1264/1316 (96.05%), Postives = 1291/1316 (98.10%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDSTIEELFARHNLGSVPNTPFSDEVA NLTNRIKSRLVDLDKDMQDKR+SND
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKSRLVDLDKDMQDKRVSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYM ANDRWKN+EAQKHAKA+IKRGI+KRIE KESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMGANDRWKNIEAQKHAKADIKRGIVKRIEVKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGR PPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRLPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVNNN+SRYQKEMESRKRF+ESKLQSLDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLAVESSSADSHFQ LDKLRMVFEE++KLSNETIP AEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAVESSSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRDAVENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKTME
Sbjct: 781  LDDVVGVLAQVKADRDAVENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSN+QIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNLQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELD LTEE+ QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLN EYEELG+KKR 
Sbjct: 901  AEEELDLLTEERGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLL+T SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI  ELNKSKD
Sbjct: 961  FQQEVETLLKTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAE+GKLSQ+RE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDD QHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL
Match: A0A6J1E9E7 (DNA repair protein RAD50 OS=Cucurbita moschata OX=3662 GN=LOC111432029 PE=3 SV=1)

HSP 1 Score: 2398 bits (6214), Expect = 0.0
Identity = 1261/1316 (95.82%), Postives = 1290/1316 (98.02%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQD+EKTESVKS
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKS 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QMQELEKNIQD+DAKIHHAET+LKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINE+IWEISKLQTEAEV
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEHIWEISKLQTEAEV 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HMSLK ERDS IEELFARHNLGSVPNT FSDEVA NLTNRIKSRLVDLDKDMQDKR+SND
Sbjct: 361  HMSLKNERDSNIEELFARHNLGSVPNTSFSDEVASNLTNRIKSRLVDLDKDMQDKRVSND 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
            VEL TAWDCYM ANDRWKN+EAQKHAKA+IKRGI++RIE KESERDSFELQISHVDLSHI
Sbjct: 421  VELKTAWDCYMGANDRWKNIEAQKHAKADIKRGIVRRIEAKESERDSFELQISHVDLSHI 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGR PPEKDLKKEITQALRAVGME+DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRLPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEKDVNMLQMKIQEVNNN+SRYQKEMESRKRF+ESKLQSLDPHSFSVDLYL+ALE 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEG 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            SAEHMKVLA+ESSSADSHFQ LDKLRMVFEE++KLSNETIP AEK LHQLNEELDEKSQA
Sbjct: 721  SAEHMKVLAMESSSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDVVGVLA VKADRDA+ENLVQPIDTADRL+QEIQT QKQVDDLVYKLDFRGKGVKTME
Sbjct: 781  LDDVVGVLAQVKADRDAIENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDV+K
Sbjct: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEEELDRLTEE+ QVDLDEKHLAEA++PLSKEKDKLLNDYNELK+KLN EYEELG+KKR 
Sbjct: 901  AEEELDRLTEERGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRK 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            FQQEVETLLRT SKIKEYLDLKKGERLKELQEKKAQAESQLQ CD RKQEI  ELNKSKD
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST+EAE+GKLSQ+RE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNR HGTMSVYQSNIS+NKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
Sbjct: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1316
            RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDD QHSIIESQEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. TAIR 10
Match: AT2G31970.1 (DNA repair-recombination protein (RAD50) )

HSP 1 Score: 1946.4 bits (5041), Expect = 0.0e+00
Identity = 1005/1316 (76.37%), Postives = 1162/1316 (88.30%), Query Frame = 0


Query: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
            MSTVDKMLIKGIRSFDPEN+NV+TFF+PLTLIVG NGAGKTTIIECLK+SCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60

Query: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
            SGHSFIHDPKVAGETETK QIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
            NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDE+NWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI 180

Query: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDEEKTESVKS 240
            FSATRYTKALEVIKKLHKDQA EIKT+KLKLENLQTLKDAAYKLRESI+QD+E+TES K 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKV 240

Query: 241  QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300
            QM ELE ++Q +DA++H+ E +LKD+RKLQDQ+S KTAERSTLFKEQQ+QYAAL EENED
Sbjct: 241  QMLELETSVQKVDAEVHNKEMMLKDLRKLQDQVSIKTAERSTLFKEQQRQYAALPEENED 300

Query: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV 360
            T EELKEWK+KFEER+A+L +K+ K+EREM D ET  S L      Y+ EISKLQTEAE 
Sbjct: 301  TIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNYMLEISKLQTEAEA 360

Query: 361  HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND 420
            HM LK ERDSTI+ +F  +NLG+VP+TPFS EV  NLTNRIKSRL +L+ D+ DK+ SN+
Sbjct: 361  HMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEVVLNLTNRIKSRLGELEMDLLDKKKSNE 420

Query: 421  VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI 480
              L+TAWDCYMDANDRWK++EAQK AK EIK GI KRIEEKE ERDSFE +IS VD+   
Sbjct: 421  TALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDSFEFEISTVDVKQT 480

Query: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540
            DEREK +Q+E+ERKT Q +ER FES I QKQ ++Y +E KIK +NRE+D+MAGD+EDRVK
Sbjct: 481  DEREKQVQVELERKTKQNSERGFESKIEQKQHEIYSLEHKIKTLNRERDVMAGDAEDRVK 540

Query: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS 600
            L+LKK E +N KKKH+KIIDE KD+IRGVLKGR PPEKD+K+EI QALR++  E+DDL+ 
Sbjct: 541  LSLKKTEQENLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQALRSIEREYDDLSL 600

Query: 601  KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV 660
            KSREAEK+VNMLQMKIQEVNN++ ++ K+ ESRKR+IESKLQ+L   S ++D Y + LE 
Sbjct: 601  KSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLES 660

Query: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720
            AK+K+D +K +YN+A+GMRQMF+PFE+ AR  H CPCCER FTA+EE  F+KKQRVKA+S
Sbjct: 661  AKDKRDDRKREYNMANGMRQMFEPFEKRARQEHSCPCCERSFTADEEASFIKKQRVKASS 720

Query: 721  SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA 780
            + EH+K LAVESS+ADS FQQLDKLR VFEE+ KL+ E IP AEK L +  EEL +KS+A
Sbjct: 721  TGEHLKALAVESSNADSVFQQLDKLRAVFEEYSKLTTEIIPLAEKTLQEHTEELGQKSEA 780

Query: 781  FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME 840
             DDV+G+ A +KAD+D++E LVQP++ ADR+FQEI + QKQ++DL YKLDFRG GVKTME
Sbjct: 781  LDDVLGISAQIKADKDSIEALVQPLENADRIFQEIVSYQKQIEDLEYKLDFRGLGVKTME 840

Query: 841  EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900
            EIQSEL++LQ++KD LH ELEKLRD+Q YME D+S +Q RWH +REEK KAAN LRDV K
Sbjct: 841  EIQSELSSLQSSKDKLHGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTK 900

Query: 901  AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN 960
            AEE+L+RL EEKSQ+DLD K+L EA+ PLSKEK++LL+DYN++K + N+EYEEL EKKRN
Sbjct: 901  AEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRN 960

Query: 961  FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD 1020
            +QQEVE LL+ + KI EY DLKKGERL ++QEK+  ++SQLQSC+ RK E++ ELN++KD
Sbjct: 961  YQQEVEALLKASYKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNELAGELNRNKD 1020

Query: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE 1080
            LMRNQDQLRRNIEDNLNYR TKA+V+EL R+IESLEEQIL IGG++ +EAEI K+ +ERE
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIAAVEAEIVKILRERE 1080

Query: 1081 RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140
            RLLSELNRC GT+SVY+S+IS+N+++LK AQYKDIDKR+FDQLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1140

Query: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT 1200
            NALDKALMRFHTMKMEEINKIIRELWQQTYRGQD+DYI IHSDSEGAGTRSYSYKVLMQT
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQT 1200

Query: 1201 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL 1260
            GD ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN+ESLA ALL
Sbjct: 1201 GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL 1260

Query: 1261 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD 1317
            RIMEDRKGQENFQLIVITHDERFAQ+IGQRQHAEKYYRV KDD QHSIIE+QEIFD
Sbjct: 1261 RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD 1316

[Close]

BLAST of MC05g0206.1 vs. TAIR 10
Match: AT5G41790.1 (COP1-interactive protein 1 )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 252/1288 (19.57%), Postives = 513/1288 (39.83%), Query Frame = 0


Query: 8    LIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECL-KLSCTGELPPNARSGHSFI 67
            L  G+ S + EN+++      ++ ++     G+TTI E + +L    E      S HS +
Sbjct: 278  LTSGMNSAEEENKSLSLKVSEISDVI---QQGQTTIQELISELGEMKEKYKEKESEHSSL 337

Query: 68   HDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTINPHTGE 127
             +     E E+  Q+K                 +L       E K +    Q++N    E
Sbjct: 338  VELHKTHERESSSQVK-----------------ELEAHIESSE-KLVADFTQSLNNAEEE 397

Query: 128  KVCLSYRCADMDREIPALMGV-------------SKAILENVIFVHQDEANWPLQDPSTL 187
            K  LS + A++  EI                   S ++ E  +F  +D      +D ST 
Sbjct: 398  KKLLSQKIAELSNEIQEAQNTMQELMSESGQLKESHSVKERELFSLRDIHEIHQRDSSTR 457

Query: 188  KKKFD-DIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLEN--------LQTLKDAAYKL 247
              + +  + S+ +    L    K  +++   I +  ++  N        +Q L     KL
Sbjct: 458  ASELEAQLESSKQQVSDLSASLKAAEEENKAISSKNVETMNKLEQTQNTIQELMAELGKL 517

Query: 248  RESISQDEEKTESV-----------KSQMQELEKNIQDIDAKIHHAETILKDVRKLQDQI 307
            ++S  + E +  S+              ++ELE+ ++     +      L +  + +  +
Sbjct: 518  KDSHREKESELSSLVEVHETHQRDSSIHVKELEEQVESSKKLVAELNQTLNNAEEEKKVL 577

Query: 308  STKTAERSTLFKEQQ-------KQYAALAEENEDTDEELKEWKTKFEERIAILESKVSKL 367
            S K AE S   KE Q        +   L E +   D +L   +   E       ++VS+L
Sbjct: 578  SQKIAELSNEIKEAQNTIQELVSESGQLKESHSVKDRDLFSLRDIHETHQRESSTRVSEL 637

Query: 368  EREMNDMETKSSFLKQTINEYIWEISKLQTEAEVHMSLKIERDSTIEELFARHNLGSVPN 427
            E ++   E + S L   + +   E   + ++    M    +  +TI+EL     LG + +
Sbjct: 638  EAQLESSEQRISDLTVDLKDAEEENKAISSKNLEIMDKLEQAQNTIKELM--DELGELKD 697

Query: 428  TPFSDEVAFNLTNRIKS---RLVDLDKDMQDKRLSNDVELNTAWDCYMDANDRWKNVEAQ 487
                 E    L++ +KS   ++ D+ + + +      +      D   +  +  K ++  
Sbjct: 698  R--HKEKESELSSLVKSADQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQEH 757

Query: 488  KHAKAEIKRGIMKRIEEKESERDSFEL--QISHVDLSHIDEREKNMQIEVERKTNQLAER 547
                 ++K     +  E    RD  E   + S   LS ++ + K ++  V   +  L   
Sbjct: 758  MSESEQLKESHGVKERELTGLRDIHETHQRESSTRLSELETQLKLLEQRVVDLSASLNAA 817

Query: 548  EFESTIRQKQSDLYGIEQKIK-AVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIID 607
            E E   +   S +  I  ++K A ++ ++++   +E +  L  K+ EL +  + H     
Sbjct: 818  EEEK--KSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKR 877

Query: 608  EYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNSKSREAEKDVNMLQMKIQEVN 667
            +   +++  L+ R    ++  KE+ Q L +   E   L+ +  E    +   +  IQE++
Sbjct: 878  DSSSQVK-ELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELS 937

Query: 668  NNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEVAKEKKDVQKSKYNIADGMRQ 727
            +   R +     +   + S     + H   +   LR LE   E  +              
Sbjct: 938  SESERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESSE-------------- 997

Query: 728  MFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAASSAEHMKVLAVESSSADSHFQ 787
                       H V    E    AEEE   +  +  + +   E  +++ V+  +ADS   
Sbjct: 998  -----------HRVLELSESLKAAEEESRTMSTKISETSDELERTQIM-VQELTADS--- 1057

Query: 788  QLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA-FDDVVGVLAHVKADRDAVE 847
               KL+           E +   E  L  L E+ D KSQ    ++   +A ++ + ++V 
Sbjct: 1058 --SKLK-----------EQLAEKESKLFLLTEK-DSKSQVQIKELEATVATLELELESVR 1117

Query: 848  NLVQPIDT-ADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTMEEIQSELNAL-QNTKDG-- 907
              +  ++T        ++ L+ Q  ++V ++    +  KTMEE  +EL+AL Q  +D   
Sbjct: 1118 ARIIDLETEIASKTTVVEQLEAQNREMVARI---SELEKTMEERGTELSALTQKLEDNDK 1177

Query: 908  -LHNELEKLRDEQRYMENDLSNIQIRWHTLREEKV-KAANTLRDVKKAEEELDRLTEEKS 967
               + +E L  E   +  +L ++ ++   + ++ V K+      +K+ ++E++ L ++ +
Sbjct: 1178 QSSSSIETLTAEIDGLRAELDSMSVQKEEVEKQMVCKSEEASVKIKRLDDEVNGLRQQVA 1237

Query: 968  QVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEK----------LNREYEELGEKKRNFQQ 1027
             +D     L   +   S+E  + L+    LKE+          +  E   L EK +  + 
Sbjct: 1238 SLDSQRAELEIQLEKKSEEISEYLSQITNLKEEIINKVKVHESILEEINGLSEKIKGREL 1297

Query: 1028 EVETLLRTASKIKEYLDLKKGERLK-------------ELQEKKAQAESQLQSCDIRKQE 1087
            E+ETL +  S++ E L  KK E ++              L E     +++L S  ++K E
Sbjct: 1298 ELETLGKQRSELDEELRTKKEENVQMHDKINVASSEIMALTELINNLKNELDSLQVQKSE 1357

Query: 1088 ISAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEA 1147
              AEL + K   + + +L   I D    +K   E +     +E   +QI ++      EA
Sbjct: 1358 TEAELEREK---QEKSELSNQITD---VQKALVEQEAAYNTLEEEHKQINEL--FKETEA 1417

Query: 1148 EIGKLS---QERERLL----SELNRCHGTMSVYQSNIS--RNKIDLKHAQYKDIDKRYFD 1205
             + K++   +E +RLL     E+     T+ V++  +   RN++++K  + + + ++  +
Sbjct: 1418 TLNKVTVDYKEAQRLLEERGKEVTSRDSTIGVHEETMESLRNELEMKGDEIETLMEKISN 1477

[Close]

BLAST of MC05g0206.1 vs. TAIR 10
Match: AT1G67230.1 (little nuclei1 )

HSP 1 Score: 48.1 bits (113), Expect = 6.2e-05
Identity = 116/585 (19.83%), Postives = 245/585 (41.88%), Query Frame = 0


Query: 548  LDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDL----NSKSR 607
            L   +  H   I + + +  G+ K     EK    ++ +AL+ +  E+ ++    +SK  
Sbjct: 98   LKQERNAHLIAIADVEKREEGLRKA-LGIEKQCALDLEKALKELRAENAEIKFTADSKLT 157

Query: 608  EAEKDVNMLQMKIQEVN----------NNISRYQKEMESRKRFIESKLQSLDPHSFSVDL 667
            EA   V  ++ K  EV             +SR   ++E + + +E++  SL    FS   
Sbjct: 158  EANALVRSVEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFS--- 217

Query: 668  YLRALEVAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKK 727
            Y+   E   ++  + K + ++ +  R++ +  ERVA++  +    +R   A E D+ +K+
Sbjct: 218  YIAEREA--DEATLSKQREDLREWERKLQEGEERVAKSQMIVK--QREDRANESDKIIKQ 277

Query: 728  QRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEE 787
            +  +   + + +    +     +       K   + E+   +  ++I    + L  L E+
Sbjct: 278  KGKELEEAQKKIDAANLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEK 337

Query: 788  LDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQ-EIQTLQKQVDD----LVYK 847
            L+ + +             A +  V+     +D+  R F+ E++  +K +DD     V +
Sbjct: 338  LEAREK------------MAVQQLVDEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAE 397

Query: 848  LDFRGKGVKTMEEIQSELNALQNTKDGLHNELEK---------------LRDEQRYMEND 907
            ++ R    K MEE  ++     + K   H E E                L+ E++ +E +
Sbjct: 398  VEKREAEWKHMEEKVAKREQALDRKLEKHKEKENDFDLRLKGISGREKALKSEEKALETE 457

Query: 908  LSNIQIRWHTLRE-----EKVKAAN--TLRDVKKAEEELDRLTEEKSQVDLDEKHLAEAI 967
               +      +       EKV   N   L ++ K ++EL    EE+S+    +  L E I
Sbjct: 458  KKKLLEDKEIILNLKALVEKVSGENQAQLSEINKEKDELRVTEEERSEYLRLQTELKEQI 517

Query: 968  VPLSKEKDKLLNDYNELK---EKLNREYEELGEKKRNFQQEVETLLRTASKIKEYLDLKK 1027
                 +++ L  +  +LK   E   +E+EEL E+K     E++ +     K++ ++ L++
Sbjct: 518  EKCRSQQELLQKEAEDLKAQRESFEKEWEELDERKAKIGNELKNITDQKEKLERHIHLEE 577

Query: 1028 GERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKDLM-RNQDQLRRNIEDNLNYRKTK 1087
                KE Q      E +L++ ++ K   +  +   + ++ +  +  R  +  ++  RK K
Sbjct: 578  ERLKKEKQAANENMERELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRK 637

[Close]

BLAST of MC05g0206.1 vs. TAIR 10
Match: AT1G13220.2 (nuclear matrix constituent protein-related )

HSP 1 Score: 44.3 bits (103), Expect = 8.9e-04
Identity = 142/688 (20.64%), Postives = 297/688 (43.17%), Query Frame = 0


Query: 305 LKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKL-QTEAEVHMS 364
           L E   + +++ A+LE K+S LE+E+   +     L     E + +  +L Q   E    
Sbjct: 72  LNEASMEKKDQEALLE-KISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEI 131

Query: 365 LKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDK----RLSN 424
           LK E+ S +      + L +V     +   A  L  +    L    +++Q++    RLS+
Sbjct: 132 LKREQSSHL------YALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSS 191

Query: 425 DVELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSH 484
           + +L  A       N R  +VE  K   AE K          E+ R S EL++    L  
Sbjct: 192 EAKLVEANALVASVNGRSSDVE-NKIYSAESKLA--------EATRKSSELKLR---LKE 251

Query: 485 IDEREKNMQIEVERKTNQLAERE-FESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDR 544
           ++ RE  +Q   + + +   ERE +E T ++++  L   E+K++    +++ +     + 
Sbjct: 252 VETRESVLQ---QERLSFTKERESYEGTFQKQREYLNEWEKKLQG---KEESITEQKRNL 311

Query: 545 VKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDL 604
            +   K  E++   K   K ++E+  K+   +      E+D+ K + + L     E   L
Sbjct: 312 NQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRL-EELTTKEKEAHTL 371

Query: 605 NSKSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLD------PHSFSVD 664
                  E ++   + K+  +    +  QK ++ +K  + SK+   +        S   +
Sbjct: 372 QITLLAKENELRAFEEKL--IAREGTEIQKLIDDQKEVLGSKMLEFELECEEIRKSLDKE 431

Query: 665 LYLRALEVAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVK 724
           L  +  E+ ++K ++  S+  +    + M   F+RV           +  T +E ++ ++
Sbjct: 432 LQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVNEKEMDLEA--KLKTIKEREKIIQ 491

Query: 725 KQRVKAASSAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNE 784
            +  +   S E  ++L+ + S  D   Q+++K+R    +  ++  E   + E    +  E
Sbjct: 492 AEEKRL--SLEKQQLLSDKESLEDLQ-QEIEKIRAEMTKKEEMIEEECKSLEIKKEEREE 551

Query: 785 ELDEKSQAFDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFR 844
            L  +S+    +     H +     VENL Q  +  ++ ++ +   Q   +    ++   
Sbjct: 552 YLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEILDEKQAVYNKERIRISEE 611

Query: 845 GKGVKTMEEIQSELNALQNTKDGLHNE-LEKLRDEQRYMENDLSNIQIRWHTLREE-KVK 904
            +  +  + ++ E   L+  +  L  + +++L D +   E+  +N++     L+E+ K++
Sbjct: 612 KEKFERFQLLEGE--RLKKEESALRVQIMQELDDIRLQRESFEANMEHERSALQEKVKLE 671

Query: 905 AANTLRDVKKAEEELD-RLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNR 964
            +  + D++     L+  L E K Q   DEK L + +     ++   L+D N  K+ LNR
Sbjct: 672 QSKVIDDLEMMRRNLEIELQERKEQ---DEKDLLDRMAQFEDKRMAELSDINHQKQALNR 721

Query: 965 EYEELGEKKRNFQQEVETLLRTASKIKE 978
           E EE+  K+   Q+E E + +   K+KE
Sbjct: 732 EMEEMMSKRSALQKESEEIAKHKDKLKE 721

The following BLAST results are available for this feature:

BLAST of MC05g0206.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL02	0.0e+00	76.37	DNA repair protein RAD50 OS=Arabidopsis thaliana OX=3702 GN=RAD50 PE=1 SV=2	[more]
Q92878	2.2e-164	31.08	DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1	[more]
Q9JIL8	1.6e-162	30.51	DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1	[more]
P70388	2.9e-161	30.48	DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1	[more]
Q54CS9	8.6e-161	29.82	DNA repair protein RAD50 OS=Dictyostelium discoideum OX=44689 GN=rad50 PE=3 SV=1	[more]

BLAST of MC05g0206.1 vs. NCBI nr


Match Name	Identity	Description
XP_022146955.1	99.77	DNA repair protein RAD50 [Momordica charantia]	[more]
XP_038891799.1	96.35	DNA repair protein RAD50 isoform X1 [Benincasa hispida] >XP_038891805.1 DNA repa...	[more]
XP_008438322.1	96.05	PREDICTED: DNA repair protein RAD50 [Cucumis melo]	[more]
XP_004133980.1	96.05	DNA repair protein RAD50 isoform X1 [Cucumis sativus] >KGN56710.1 hypothetical p...	[more]
KAG6582490.1	96.05	DNA repair protein RAD50, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MC05g0206.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1CYT2	99.77	DNA repair protein RAD50 OS=Momordica charantia OX=3673 GN=LOC111016026 PE=3 SV=...	[more]
A0A0A0L416	96.05	Zinc-hook domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129670 P...	[more]
A0A1S3AWR7	96.05	DNA repair protein RAD50 OS=Cucumis melo OX=3656 GN=LOC103483462 PE=3 SV=1	[more]
A0A6J1IVK4	96.05	DNA repair protein RAD50 OS=Cucurbita maxima OX=3661 GN=LOC111479648 PE=3 SV=1	[more]
A0A6J1E9E7	95.82	DNA repair protein RAD50 OS=Cucurbita moschata OX=3662 GN=LOC111432029 PE=3 SV=1	[more]

BLAST of MC05g0206.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31970.1	0.0e+00	76.37	DNA repair-recombination protein (RAD50)	[more]
AT5G41790.1	1.2e-05	19.57	COP1-interactive protein 1	[more]
AT1G67230.1	6.2e-05	19.83	little nuclei1	[more]
AT1G13220.2	8.9e-04	20.64	nuclear matrix constituent protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 753..780
None	No IPR available	COILS	Coil	Coil	coord: 987..1014
None	No IPR available	COILS	Coil	Coil	coord: 595..629
None	No IPR available	COILS	Coil	Coil	coord: 1038..1058
None	No IPR available	COILS	Coil	Coil	coord: 545..565
None	No IPR available	COILS	Coil	Coil	coord: 808..828
None	No IPR available	COILS	Coil	Coil	coord: 228..262
None	No IPR available	COILS	Coil	Coil	coord: 839..880
None	No IPR available	COILS	Coil	Coil	coord: 1065..1085
None	No IPR available	COILS	Coil	Coil	coord: 926..971
None	No IPR available	COILS	Coil	Coil	coord: 284..343
None	No IPR available	COILS	Coil	Coil	coord: 884..918
None	No IPR available	GENE3D	1.10.287.1490		coord: 814..985 e-value: 1.5E-5 score: 26.3
None	No IPR available	PANTHER	PTHR18867	RAD50	coord: 1..1314
None	No IPR available	CDD	cd03240	ABC_Rad50	coord: 4..170 e-value: 5.19345E-40 score: 145.443
None	No IPR available	CDD	cd03240	ABC_Rad50	coord: 1205..1308 e-value: 1.15241E-42 score: 153.147
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..300 e-value: 1.7E-31 score: 112.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1068..1314 e-value: 3.5E-25 score: 91.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 20..1286
IPR004584	DNA repair protein Rad50, eukaryotes	TIGRFAM	TIGR00606	TIGR00606	coord: 3..1310 e-value: 1.9E-195 score: 650.0
IPR013134	RAD50, zinc hook	PFAM	PF04423	Rad50_zn_hook	coord: 687..724 e-value: 8.6E-7 score: 28.7
IPR038729	Rad50/SbcC-type AAA domain	PFAM	PF13476	AAA_23	coord: 7..256 e-value: 2.2E-36 score: 126.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC05g0206	MC05g0206	gene

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC05g0206.1-utr3	MC05g0206.1-utr3-MC05:1467889..1468284	utr3
MC05g0206.1-utr3	MC05g0206.1-utr3-MC05:1469123..1469198	utr3

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1469199..1469238	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1469343..1469471	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1469634..1469767	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1469847..1469909	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1469984..1470134	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1470706..1470758	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1470840..1470965	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1471603..1471927	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1472005..1472174	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1473393..1473594	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1473764..1473972	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1474093..1474302	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1474527..1474656	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1474767..1474881	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1475217..1475344	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1476568..1476660	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1476901..1477112	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1477216..1477323	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1477393..1477497	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1477647..1477817	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1477967..1478145	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1478611..1478839	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1480255..1480369	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1480556..1480731	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1481003..1481170	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1481645..1481731	CDS
MC05g0206.1-cds	MC05g0206.1-cds-MC05:1481874..1481996	CDS

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC05g0206.1-utr5	MC05g0206.1-utr5-MC05:1481997..1482446	utr5

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC05g0206.1	MC05g0206.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0007004	telomere maintenance via telomerase
biological_process	GO:0000722	telomere maintenance via recombination
biological_process	GO:0000723	telomere maintenance
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016233	telomere capping
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0000794	condensed nuclear chromosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003691	double-stranded telomeric DNA binding
molecular_function	GO:0051880	G-quadruplex DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0043047	single-stranded telomeric DNA binding