MC03g_new0123.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0123.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 5654760 .. 5656792 (-)
Sequence length	444
RNA-Seq Expression	MC03g_new0123.1
Synteny	MC03g_new0123.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATTGGGTGTGGGTGCTGCTGTATACTGTCACTCGTGGAGGACGCGCCTCTGCTGCACAGCATCGATCTTGTTGTTAGTCGTCGTTCCAAGTGGTGTCGTTGCTGCTCAAAGATGCGTCACCAGGGGTTTCCGCATGTGTGTCGTGGTGGGGAGTTCATAAGGGAGGTCGTTCTCGGGTTATTGCTTGTTGCCAAATATGACAGCCGAGGGAGGGGAATGGTGTGTAGGAGAATACAGAGAATATGGCGCGACTTGGTGAAAGGAAAAGAAGAAGAAGGTGTCTAGGTTTTTTTTTTTTTCTTTTTCCCAAAAGAAATAGGTATGTCTCCAAGGACAAACAAAAAAAAGTATATATACCAGTATATATTATGTAACATATAGAGGTATATTATTATCATAGATAAATATATATATAATATATATATATATTTTATAACCTTCCAATTTTGTATATAACAATGAAAAATATATATTATATAACCTTTTGAAGAATATATTTTTATTATCCTGGATATTAAAAGATTAAAATGAAATATCTTGTATAATGATCGTTGGAATATATTATATAATCTAATAATTTATTATATACCAATAAAAAGTACCTATTATATAACCTCATAGAAGAGATATATTTTTATCATACAATTGAAAAGAAAAAAAATATGTGTTTGGAAAAAAAATGAAGGAAAGAAGATAATTAAAATATGGGAACATTTTTTTTTGAGGAGTGTATGTTTATCAAATTATGAAAATAAAAAGGACGTTGACAAAAAAATAATAAACAGAAAAAGATAATTAAATTAAATGAATAATAATTAAACAATATAGTTCTTTAATATAAAATCTTTGAAAAATGTAGCTTTAAGTGAAAAAACATATTGGGAATATCTAGGAGGGTTGAAATAATAATAATAATAAGTCCTAAAAATTTAAAAGTCAAAATTTTCATATTATGCACATTTGTAAAAAAATTGATTCTAAAAAACTCTCTAATATTTATTGCATTTACATTTATTATAGTTATTTATTTTTTAATATAAAATATTTAATTTCATAAATCGTTATCATAATTTTTTAATTATTGCAGCTCCAATACAAATTTTCAACACTACTCGCTTCATTCACTACTACTCGCTTCATTCACTCCTTCAAAACCTGAGTTTACTCATCCAAAAAGATTGATTATCTTATTATCAACATTATTAATTACAAAAATATCCAAATCATTCTCTCCCATTTTATAATTTCTCACCATTCCCCTTATTCAACAGGTATAGGTCTTTCTAAAATCACTGTTCCCTCGGATATATCCAGATGTAAACTAAATTCCATATAAATTTCCTAAAATTACTGTTAGCAACTCACTCTCCAACTACAACCTTCGGATATATCCGGATTTTTTAGGCTTCTAATATAAAATCACTGTTAGCAACTCACTCTCCAAGTACAACCCTCGGATATATCTGGGTTTTTAAGGCTTCTAAAATAAAATCATTGTTAGCAACTCACTCTCCAACTACAACCCTCGGATATATGTGAATATAAACTAAATTTCATATAAACTTCCTTATATCCCCAAATATACAATATTTCACACGAAATCAGAAATCGAAAGCAACGGTTGGAGACTACTTGTGCATGGATGGAACATTGAAAGGGTTTAATAGTACAAAATAAAAACAGAGTTTTCAACATTGTACAAATCTGAAAGAGAAAACTATTAGGATATATTGGAATGCAAACCTTTCGATCGAGATAAACGGAGATGAACTGATCCGACAATGGAGGGGGATCAGAGACGAAGGAACGACGACCGGAGACGAAGGAGTGGATAGAAACGACGAGTTTTTGAATAAGAATAATGGAGACGGCGACGAGCTGATAAGAAGAACGGATACGACGGCCGGAGAAGGAGGCACCCAGACGACGACAGAGGCAAAGGAATGTAGAGACGGTCGGTCGGAGATGGAAAACAGAGGAAGCAGAAGAGTTGGAGGAAGGGGATTCAAATTTTTTGAAAATTGA

mRNA sequence

ATGCATGCATTGGGTGTGGGTGCTGCTGTATACTGTCACTCGTGGAGGACGCGCCTCTGCTGCACAGCATCGATCTTGTTGTTAGTCGTCGTTCCAAGTGGTGTCGTTGCTGCTCAAAGATGCGTCACCAGGGGTTTCCGCATGATATATTGGAATGCAAACCTTTCGATCGAGATAAACGGAGATGAACTGATCCGACAATGGAGGGGGATCAGAGACGAAGGAACGACGACCGGAGACGAAGGAGTGGATAGAAACGACGAGTTTTTGAATAAGAATAATGGAGACGGCGACGAGCTGATAAGAAGAACGGATACGACGGCCGGAGAAGGAGGCACCCAGACGACGACAGAGGCAAAGGAATGTAGAGACGGTCGGTCGGAGATGGAAAACAGAGGAAGCAGAAGAGTTGGAGGAAGGGGATTCAAATTTTTTGAAAATTGA

Coding sequence (CDS)

ATGCATGCATTGGGTGTGGGTGCTGCTGTATACTGTCACTCGTGGAGGACGCGCCTCTGCTGCACAGCATCGATCTTGTTGTTAGTCGTCGTTCCAAGTGGTGTCGTTGCTGCTCAAAGATGCGTCACCAGGGGTTTCCGCATGATATATTGGAATGCAAACCTTTCGATCGAGATAAACGGAGATGAACTGATCCGACAATGGAGGGGGATCAGAGACGAAGGAACGACGACCGGAGACGAAGGAGTGGATAGAAACGACGAGTTTTTGAATAAGAATAATGGAGACGGCGACGAGCTGATAAGAAGAACGGATACGACGGCCGGAGAAGGAGGCACCCAGACGACGACAGAGGCAAAGGAATGTAGAGACGGTCGGTCGGAGATGGAAAACAGAGGAAGCAGAAGAGTTGGAGGAAGGGGATTCAAATTTTTTGAAAATTGA

Protein sequence

MHALGVGAAVYCHSWRTRLCCTASILLLVVVPSGVVAAQRCVTRGFRMIYWNANLSIEINGDELIRQWRGIRDEGTTTGDEGVDRNDEFLNKNNGDGDELIRRTDTTAGEGGTQTTTEAKECRDGRSEMENRGSRRVGGRGFKFFEN

Homology

The following BLAST results are available for this feature:

BLAST of MC03g_new0123.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0123.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0123.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0123.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..105

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC03g_new0123	MC03g_new0123	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC03g_new0123.1-cds	MC03g_new0123.1-cds-MC03:5654760..5655060	CDS
MC03g_new0123.1-cds	MC03g_new0123.1-cds-MC03:5656650..5656792	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC03g_new0123.1	MC03g_new0123.1-protein	polypeptide