MC02g1354.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1354.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP synthase subunit alpha, chloroplastic
Location	MC02: 16097130 .. 16097687 (-)
Sequence length	558
RNA-Seq Expression	MC02g1354.1
Synteny	MC02g1354.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACAAATGTCTCTTCTTTTACGAAGACCACCGGGTCGTGAAGCTTATCCGGGGGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATCTGCCGATCTATTCAATGCTGGAATCAGACCTGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTT

mRNA sequence

CGACAAATGTCTCTTCTTTTACGAAGACCACCGGGTCGTGAAGCTTATCCGGGGGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATCTGCCGATCTATTCAATGCTGGAATCAGACCTGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTT

Coding sequence (CDS)

CGACAAATGTCTCTTCTTTTACGAAGACCACCGGGTCGTGAAGCTTATCCGGGGGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATCTGCCGATCTATTCAATGCTGGAATCAGACCTGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTT

Protein sequence

RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKF

Homology

[Close]

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot
Match: B1A920 (ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 4.9e-94
Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot
Match: Q589B3 (ATP synthase subunit alpha, chloroplastic OS=Silene latifolia OX=37657 GN=atpA PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 8.3e-94
Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSFLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQ QSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVEEQIMTIYTGTNGYLDSLEI 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot
Match: Q8S8Y3 (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEV 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot
Match: Q09X32 (ATP synthase subunit alpha, chloroplastic OS=Morus indica OX=248361 GN=atpA PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSRLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPL VEEQI+TIYTGTNGYLDSLEI
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQIITIYTGTNGYLDSLEI 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot
Match: Q3C1H4 (ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=atpA PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEV 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. NCBI nr
Match: YP_010144914.1 (ATP synthase CF1 alpha subunit [Exacum affine] >QQL92318.1 ATP synthase CF1 alpha subunit [Exacum affine])

HSP 1 Score: 349 bits (895), Expect = 3.11e-119
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSSLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQF+SDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. NCBI nr
Match: KAE9610880.1 (ATP synthase subunit alpha [Lupinus albus])

HSP 1 Score: 348 bits (894), Expect = 4.90e-119
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. NCBI nr
Match: QHN77035.1 (ATP synthase subunit alpha [Arachis hypogaea])

HSP 1 Score: 347 bits (891), Expect = 1.45e-118
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQF+
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFS 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. NCBI nr
Match: WP_222050808.1 (F0F1 ATP synthase subunit alpha, partial [Modestobacter lapidis] >MBY3555947.1 F0F1 ATP synthase subunit alpha [Modestobacter lapidis])

HSP 1 Score: 347 bits (891), Expect = 3.65e-118
Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 85  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSRLGEGSMTALPIVETQSGDVSAYI 144

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGK KLELAQFA
Sbjct: 145 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFA 204

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 205 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 264

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 265 GQVRKF 270

[Close]

BLAST of MC02g1354.1 vs. NCBI nr
Match: WP_202958814.1 (F0F1 ATP synthase subunit alpha, partial [Solirubrobacter sp. CPCC 204708] >MBE2321200.1 F0F1 ATP synthase subunit alpha [Solirubrobacter sp. CPCC 204708])

HSP 1 Score: 346 bits (888), Expect = 4.01e-118
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 57  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSRLGEGSMTALPIVETQSGDVSAYI 116

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 117 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 176

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPL VEEQI+TIYTGTNGYLDSLEI
Sbjct: 177 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQIITIYTGTNGYLDSLEI 236

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 237 GQVRKF 242

[Close]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL
Match: A0A7T7FM59 (ATP synthase CF1 alpha subunit OS=Exacum affine OX=13525 GN=atpA PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 1.51e-119
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSSLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQF+SDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL
Match: A0A6A4QAP9 (ATP synthase subunit alpha, mitochondrial OS=Lupinus albus OX=3870 GN=Lalb_Chr07g0191451 PE=3 SV=1)

HSP 1 Score: 348 bits (894), Expect = 2.37e-119
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL
Match: A0A6B9V7M4 (ATP synthase subunit alpha, mitochondrial OS=Arachis hypogaea OX=3818 GN=DS421_19g649170 PE=3 SV=1)

HSP 1 Score: 347 bits (891), Expect = 7.02e-119
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 54  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYI 113

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQF+
Sbjct: 114 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFS 173

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEI
Sbjct: 174 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEI 233

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 234 GQVRKF 239

[Close]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL
Match: A0A075TQ03 (ATP synthase subunit alpha OS=Camellia reticulata OX=452972 GN=atpA PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 3.87e-118
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 451

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL
Match: A0A075TQN1 (ATP synthase subunit alpha, chloroplastic OS=Camellia sinensis var. sinensis OX=542762 GN=atpA PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 3.87e-118
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI
Sbjct: 392 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 451

Query: 181 GQVRKF 186
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 341.3 bits (874), Expect = 5.0e-94
Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK SS LGEGSMTALPIVETQSGDVSAYI
Sbjct: 272 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYI 331

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA
Sbjct: 332 PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 391

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           ELEAF+QF+SDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLD LEI
Sbjct: 392 ELEAFSQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDGLEI 451

Query: 181 GQVRKF 187
           GQVRKF
Sbjct: 452 GQVRKF 457

[Close]

BLAST of MC02g1354.1 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-67
Identity = 130/186 (69.89%), Postives = 151/186 (81.18%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREA+PGDVFYLHSRLLERAAK S   G GS+TALP++ETQ+GDVSAYI
Sbjct: 552 RQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYI 611

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMKQV G  KLELAQ+ 
Sbjct: 612 PTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYR 671

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           E+ AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +E+QI+ IY   NG+ D + +
Sbjct: 672 EVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPL 731

Query: 181 GQVRKF 187
            ++ ++
Sbjct: 732 DRISQY 737

[Close]

BLAST of MC02g1354.1 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-67
Identity = 130/186 (69.89%), Postives = 151/186 (81.18%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           RQMSLLLRRPPGREA+PGDVFYLHSRLLERAAK S   G GS+TALP++ETQ+GDVSAYI
Sbjct: 282 RQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYI 341

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFA 120
           PTNVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMKQV G  KLELAQ+ 
Sbjct: 342 PTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYR 401

Query: 121 ELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 180
           E+ AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +E+QI+ IY   NG+ D + +
Sbjct: 402 EVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPL 461

Query: 181 GQVRKF 187
            ++ ++
Sbjct: 462 DRISQY 467

[Close]

BLAST of MC02g1354.1 vs. TAIR 10
Match: AT1G76030.1 (ATPase, V1 complex, subunit B protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 34/100 (34.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           R++S      PGR  YPG ++   + + ERA +      +GS+T +PI+   + D++   
Sbjct: 284 REVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG--RKGSITQIPILTMPNDDITHPT 343

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAA 101
           P     IT+GQI++   L N  I P INV  S+SR+  +A
Sbjct: 344 PDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 381

[Close]

BLAST of MC02g1354.1 vs. TAIR 10
Match: AT1G20260.1 (ATPase, V1 complex, subunit B protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 34/100 (34.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 1   RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSPLGEGSMTALPIVETQSGDVSAYI 60
           R++S      PGR  YPG ++   + + ERA +      +GS+T +PI+   + D++   
Sbjct: 285 REVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG--RKGSITQIPILTMPNDDITHPT 344

Query: 61  PTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAA 101
           P     IT+GQI++   L N  I P INV  S+SR+  +A
Sbjct: 345 PDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 382

The following BLAST results are available for this feature:

BLAST of MC02g1354.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1A920	4.9e-94	98.92	ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 ...	[more]
Q589B3	8.3e-94	98.92	ATP synthase subunit alpha, chloroplastic OS=Silene latifolia OX=37657 GN=atpA P...	[more]
Q8S8Y3	1.4e-93	97.85	ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA ...	[more]
Q09X32	1.4e-93	98.39	ATP synthase subunit alpha, chloroplastic OS=Morus indica OX=248361 GN=atpA PE=3...	[more]
Q3C1H4	1.4e-93	97.85	ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=atp...	[more]

BLAST of MC02g1354.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_010144914.1	3.11e-119	98.92	ATP synthase CF1 alpha subunit [Exacum affine] >QQL92318.1 ATP synthase CF1 alph...	[more]
KAE9610880.1	4.90e-119	98.92	ATP synthase subunit alpha [Lupinus albus]	[more]
QHN77035.1	1.45e-118	98.39	ATP synthase subunit alpha [Arachis hypogaea]	[more]
WP_222050808.1	3.65e-118	98.92	F0F1 ATP synthase subunit alpha, partial [Modestobacter lapidis] >MBY3555947.1 F...	[more]
WP_202958814.1	4.01e-118	98.39	F0F1 ATP synthase subunit alpha, partial [Solirubrobacter sp. CPCC 204708] >MBE2...	[more]

BLAST of MC02g1354.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7T7FM59	1.51e-119	98.92	ATP synthase CF1 alpha subunit OS=Exacum affine OX=13525 GN=atpA PE=4 SV=1	[more]
A0A6A4QAP9	2.37e-119	98.92	ATP synthase subunit alpha, mitochondrial OS=Lupinus albus OX=3870 GN=Lalb_Chr07...	[more]
A0A6B9V7M4	7.02e-119	98.39	ATP synthase subunit alpha, mitochondrial OS=Arachis hypogaea OX=3818 GN=DS421_1...	[more]
A0A075TQ03	3.87e-118	100.00	ATP synthase subunit alpha OS=Camellia reticulata OX=452972 GN=atpA PE=3 SV=1	[more]
A0A075TQN1	3.87e-118	100.00	ATP synthase subunit alpha, chloroplastic OS=Camellia sinensis var. sinensis OX=...	[more]

BLAST of MC02g1354.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00120.1	5.0e-94	97.31	ATP synthase subunit alpha	[more]
AT2G07698.1	5.2e-67	69.89	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	5.2e-67	69.89	ATP synthase subunit 1	[more]
AT1G76030.1	1.2e-07	34.00	ATPase, V1 complex, subunit B protein	[more]
AT1G20260.1	1.2e-07	34.00	ATPase, V1 complex, subunit B protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 1..94 e-value: 1.4E-29 score: 103.3
IPR000793	ATP synthase, alpha subunit, C-terminal	PFAM	PF00306	ATP-synt_ab_C	coord: 101..186 e-value: 8.0E-38 score: 129.6
IPR000793	ATP synthase, alpha subunit, C-terminal	CDD	cd18113	ATP-synt_F1_alpha_C	coord: 105..186 e-value: 2.26491E-52 score: 161.765
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..101 e-value: 4.8E-43 score: 149.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..100
IPR038376	ATP synthase, alpha subunit, C-terminal domain superfamily	GENE3D	1.20.150.20		coord: 102..186 e-value: 5.8E-43 score: 148.0
None	No IPR available	PANTHER	PTHR48082:SF6	ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC	coord: 1..186
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 1..186
None	No IPR available	SUPERFAMILY	47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 102..186
IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	PROSITE	PS00152	ATPASE_ALPHA_BETA	coord: 85..94

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC02g1354	MC02g1354	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC02g1354.1-cds	MC02g1354.1-cds-MC02:16097130..16097687	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC02g1354.1	MC02g1354.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism