MC01g_new0138.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC01g_new0138.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 4963151 .. 4964330 (+)
Sequence length	570
RNA-Seq Expression	MC01g_new0138.1
Synteny	MC01g_new0138.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACCTAAAGGCCTTGCCTAATGGCCGACCTAAGGCATTCTTTGAAGGCCGATCTGAAGGTCTTCCTTGAAGATCATTCAAGGGAGGAACGACCTTCCATACTTAGCTAAATTTCAGATGACAAGAGTATGAACTGGAATAGCTACTCTCGACAAGCCGACCTTGGTCCCGACATGCTCAACCGCTAGTCGGATTCCTTGTCGGATACCTCAACCTATAAATATGACACTTTACTTTTCAGTCAGGTATGGTATTCTAGCTCGGTCTCCATATTGAGGTCAGACTAAACTGACTTGAGCGTCAGAGTGTTTATTCCCTTATGCAGGTCTTTCCTAGTCAAGTGGCCTTCAGCTCATCCTTGACACTTCAGCTCATCCCAGTCAGTCAACCTTGACCCTTTGAGCTGGTCATCTCTTTCCAAGGATACCCAAGCTCTTCTCGCGGTCATACCTAGAGCAGGTTCAACTCTTCCACGTGGTCGGCCTTGACTAGGTTATACCCCGTCACATTTTTTGCATAAACATTTGGCGTCGTCTGTGAGAAAGGACATTTTAAGTCATTCCTACCAAACAAAGCTATGGCATGCACGAAGAATCCAATATCCGCATCTCAACGGGGATCTTCGAGATGTTCTCAAAGACCGAGCTAGGCGATCAACATGTAAATGATGATAGCTCAACCTCGCTTAGAGGAAGAGCTCCATCTCAGGTCATCCGCGACTAGAGGAAGAGCTGCCATCATATAGCTCATCCCACCAAGGGGAAGAGCTCCATCTCAACTCATCCCTGGTTAGAAGAAGAGTTGACATTAGATAACTCAACCTTGCCTAGAGAAAGAGCTCCATCTTAGCTCGTCCCTGCCTAGAGGAAGAGCTCCATCTCAACTTATCCCCGGTTAGAGGAAGAGCTGCCATCAGATAACTCAACCTCGCCAAGAGGAACAGTTTCGTCTCAACTCATCCCCGCCTTGGGGAACAGCTTCATCTCAGCTCTCCTCAACGAGAGGAAGAGCCTCATCTTAGCTCAACCTCATCTAGGGGAAGAGCTCCATCTCAGCTCATCCCCACTAAGAGGAAGAACTTCATCTTAGCTCATTCGCAGCTAGAGGAAGAGCTGTCATCATATAGCTCATCCCCGCCAATGGGAAGACCTCCATCTCAGCTCATCCCCGGTTAG

mRNA sequence

ATGGCCGACCTAAAGGCCTTGCCTAATGGCCGACCTAAGGCATTCTTTGAAGGCCGATCTGAAGCTACTCTCGACAAGCCGACCTTGGTCCCGACATGCTCAACCGCTAGTCGGATTCCTTGTCGGATACCTCAACCTATAAATATGACACTTTACTTTTCAGTCAGCTCATCCCAGTCAGTCAACCTTGACCCTTTGAGCTGGTCATCTCTTTCCAAGGATACCCAAGCTCTTCTCGCGGTCATACCTAGAGCAGAATCCAATATCCGCATCTCAACGGGGATCTTCGAGATGTTCTCAAAGACCGAGCTAGGCGATCAACATGTAAATGATGATAGCTCAACCTCGCTTAGAGGAAGAGCTCCATCTCAGCTTCATCTCAGCTCTCCTCAACGAGAGGAAGAGCCTCATCTTAGCTCAACCTCATCTAGGGGAAGAGCTCCATCTCAGCTCATCCCCACTAAGAGGAAGAACTTCATCTTAGCTCATTCGCAGCTAGAGGAAGAGCTGTCATCATATAGCTCATCCCCGCCAATGGGAAGACCTCCATCTCAGCTCATCCCCGGTTAG

Coding sequence (CDS)

ATGGCCGACCTAAAGGCCTTGCCTAATGGCCGACCTAAGGCATTCTTTGAAGGCCGATCTGAAGCTACTCTCGACAAGCCGACCTTGGTCCCGACATGCTCAACCGCTAGTCGGATTCCTTGTCGGATACCTCAACCTATAAATATGACACTTTACTTTTCAGTCAGCTCATCCCAGTCAGTCAACCTTGACCCTTTGAGCTGGTCATCTCTTTCCAAGGATACCCAAGCTCTTCTCGCGGTCATACCTAGAGCAGAATCCAATATCCGCATCTCAACGGGGATCTTCGAGATGTTCTCAAAGACCGAGCTAGGCGATCAACATGTAAATGATGATAGCTCAACCTCGCTTAGAGGAAGAGCTCCATCTCAGCTTCATCTCAGCTCTCCTCAACGAGAGGAAGAGCCTCATCTTAGCTCAACCTCATCTAGGGGAAGAGCTCCATCTCAGCTCATCCCCACTAAGAGGAAGAACTTCATCTTAGCTCATTCGCAGCTAGAGGAAGAGCTGTCATCATATAGCTCATCCCCGCCAATGGGAAGACCTCCATCTCAGCTCATCCCCGGTTAG

Protein sequence

MADLKALPNGRPKAFFEGRSEATLDKPTLVPTCSTASRIPCRIPQPINMTLYFSVSSSQSVNLDPLSWSSLSKDTQALLAVIPRAESNIRISTGIFEMFSKTELGDQHVNDDSSTSLRGRAPSQLHLSSPQREEEPHLSSTSSRGRAPSQLIPTKRKNFILAHSQLEEELSSYSSSPPMGRPPSQLIPG

Homology

The following BLAST results are available for this feature:

BLAST of MC01g_new0138.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0138.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0138.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0138.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC01g_new0138	MC01g_new0138	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g_new0138.1-cds	MC01g_new0138.1-cds-MC01:4963151..4963214	CDS
MC01g_new0138.1-cds	MC01g_new0138.1-cds-MC01:4963298..4963400	CDS
MC01g_new0138.1-cds	MC01g_new0138.1-cds-MC01:4963526..4963614	CDS
MC01g_new0138.1-cds	MC01g_new0138.1-cds-MC01:4963748..4963863	CDS
MC01g_new0138.1-cds	MC01g_new0138.1-cds-MC01:4964133..4964330	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC01g_new0138.1	MC01g_new0138.1-protein	polypeptide