MC01g1517.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1517.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	AWPM-19-like protein
Location	MC01: 19493700 .. 19498323 (-)
Sequence length	4124
RNA-Seq Expression	MC01g1517.1
Synteny	MC01g1517.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATTGATGGTAACTTTTAGATATATTGGCATCTATGGATTCGGCCAAGAATATAAGTCCCTCCATTGAAAAGCAAAAAAAGAAAGAGAGAAAAATGCATAAAATTTCCTCTCAAGGATGAGCCAAGCAAGAATGATTCATTTGCCCTTTACAACCAATTCTGACTCCTTTTGGCAAGCAAAGAACTTACCATCCTCCATTAAAATGCTTTACAACATTCAACTCTAGAACCTGAACAGAACTCATCCTCATCCCCAAAACTTTCTTTCTTCCAAATATGCAACCCGGAAAGCTGAAACCCATTACAGTGTCGATTTTGTTCTTCAATTTCTGCTTATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATGATGCAATTGATAATGGATTTGTTATTGGTTTGACACTAAACTTCTGATTCCTCATCTTTCTGCTGCTCTTCTTTCAACTTTGATGTTGATGTTTGTTTTTCTTGAGTGGTGATGTTGTGCAAGTTTTTCATTTTCAGGTCAAGACCTTGAAGTTCCTGCGCATTTTTCTCCAATTTTCTTTAAGATTGGAAATTCTGCCACTGGGTTCTTTGTTGTTTTTTCTTTTATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCCGGACACTTCTATTTTCGTTTATCTGATTCCAGCAACCTACCCCCTGCTGCTTCGCTAGCTCTCATCGCCTGCTTTCTAACTATTCTCGCCATGGGGTATGCAAGTTTAAATCCTATTTTGATCAAATGCTGTGTTCTAGTTCATAAACTTCGCATTATAATCACTAAACCCATTTCAAAATACAGCACCTCGCTTACAACATATAGCTTCAAAATTTTAAAATCTCCTCATTACGACGTATAGTTGTGTCAAAGGAAACGTAGTCCAAACATCTAAGAGGTTGAGACCTATAAAAAAGTTTGAATCTTTATGAAATAGATTAACTAGAATGAATGCCACTGATGCAGGTTTGCTTGGAAAGAGGTTTCAATAACAGTCATGAGTGGGCAATTGGTGAGAAACCTAAAAGCTCATATTGTTTTTCTCGCTATTTTTCTTTTCCCTTTTAGCAGACTTTGTTTCAGTTCTCAAAAGGAGCTTCACAGAGTGTTAGGAAAGGCCCAGGTTGAGTTCATTTGGCTTTTTGTGCAGATGGCATTGGAGGCTTTCGTGATCATCCTTTCAGTGACGCAGTTAATTTATACTGCAATCATCCTGTGGAGCTCAACCAACTAGCAGATTCTAGAAATAGTGTTCAACGAACACTCTGTTCGTGGGTTTGTCTTCGATTTTCTGTTCATTCTTTATTTTTCTCGATTCAGTTCTTCGTCCCGATCATGTACAGGGGAAACTTGCAATGTGCTGGCAGATGAAGATGTATAGACAATAATATGACAATTGGTGTGCGAAACAAGAAGAATAAAATTTCAATAACTTTGATGATGACTTCATTTGCTCTGTAACAGTTTCGGCAGTATGCATAAGTTTTTCCAGTAAAAGTACCACAAAAACTAACAGAAAAGAGCGAAAAAAGAGAAAAATATGTCGATATCAATTGAAAACAAAGTTGTTGTGGCCGAGCTTTCCACAAAAGACTAAACCATGTATGAATGATAGAAACGCAATGCATACGTCGAGAGAGAGTTCATTCAGCTAAGGCAATATAGCAGATGTCATATAATGATGAAAATAAGGTGATAACTAATTTATCAACATAATTGAAACATTTATGATAGTTTAATTGCGCAGCATCTTACTAACGCAAAATCGAGAACATTACGCTCCAAGAAAAGAGAACTCACTGTAAGACAAAAGACATGTAGTACGGGAATGTCTTCATGTTGCTAGCTTCTACATCCAAGAATATCATCTACCTTAGGCTGGGCTCATCAAGTTCGACATCTATCCTATCGTGCTCCTGTAAACACCCTGGCTGTTTAAACCTTCACCCGTCCTCTGAAGACTTTTGCATCCCTGCCAGAACATGATATAAATTAATCTGAGTGCCAACCAAATTTCAGATTATATTGTTCTAAAAAGGAAACCATTATTGAAGTGCATAAGTTAATCTGAAAATTTGAGATCAGTAGGCATGAATTAAGTGAATTCAATATCAACAAACAAGTTTGAAATAATTGGAGCTCGCAATTATAACAACCAGCCCTTGTGGTGGTGAGCACAGATCATAAAGAAACCAATCATCACAGTCCAACAGAGTAAATAAAAGACCTTAGAATGCAGAGCTATATCATCAGACTTTTAAAAATTTTTTATTTTTATTTTTACTGAATAGGATCAGAAACTCAGGATGGGTGAAGTTTTGAAATAGTTGTGTTTGACACAAGACTATTTCTAATAAAAACGTGGACCATATCACAAAAAATGAGTAATTGTAAGTCCCAAGTTTTTTTATTCAGGTTTATAATGTTCGAGCTCACACCACCATTACACACAGATTAGCGATTACATTCTCAACCATAAACAACTTCCTCATATGAGCAAAACTTGATATTGAACAAGGTAATCATTGTTAAACAAAAAGGTTAGTTTCCAATCTAACCCTATATATAGAAACTGTATGCAAAGTTATCGGTTGGAGCCTGTAAATACATCACATAAACCACAGCAACTCCACCATGAGGTCCTTTGTGGCACCGCTGGTCTCGACCCAATAAATGGCTGCACAAAAAAGCTTCATTTCTCAACGAAGAATTAAAATAAGACGTGCTGCTATGTAAGCAATAACAATAAATTGAAAAAAAAAAAAAGAAAAAACCTGATCTTCAGATTCGGGTTTGAAATTTTCTGGACATTCAGAAACTTCGATATGTACTGCAAAATTACTAGTTTCAGTCATACCAACTAAGAATGGCAGTGATATTTTCAGTCTAAGTCTTTCAGATGCAGATTTAAAGGCATCAGAAGAAGAGCCCTTATTAACTAACAGATTCACCTGATAAGTGTAAATCTCTATCTTCATCTTGTTTTAATGATAGATCCGTTGGAGCTGATACTGGCACATTTGTAACTTCAGGCAAGCGCGTCCCCAACTTTTCTGAAGCAATTATATCAGGTATGGCAGTATTTTCAACAGATGCACTTTCAACAATGCTGATAGTTTCCTCAGATGCCGAGACCTCTGGTGTAACCGAGTACACAATAGAGGCAGCAGTTGGTACAACCAAATCATTGGTCTTCCCATCCAGTACCTATTCATCCACCTTGTAAGTTTTTAGAGGTGGAAACTTATAATGTCTATAACAGTATGTTTCAGATTCAGCTTTAGACACCAGACTACATACCTCAGAATTCTTTGTTGTATCTACAGATTCATCGTCTGAACTGCTACTACTACTACGATCATTAGCACATGATCCTTCAACAGACTCATTCTGAACAGTACCATTTTTGCTCTCAGAAGCAAGTCCTACTTTTTGATTAGTCTCTATATTGCTCAGAACCCTAGAACTAGATGAGCTGCTCTCTTGTATTTCCTTATTCCCCTCACCAAATGGATTGCTGTGGCTTGGGTGATTCTGAGAAGCTGGGGAATCGAGCTCACCACTGTCACTTCCCTTATCATCTTGGCTCTTAACATCATCATTTCCTGACATGGAGAATTTTAGTCAGAACAAATCAACACAGAGTTCTGCTAATCGCCAGATGGAAAAAATGGTAGAGTTATTTCAGAGAGCAGGCTCCATATATATGAGGTAATGAAACAACGCCCTGTAATCCAATTCAAGTCAAACCACTCTCTCCAAAACAATCAGCGAACTGAAGTCCAAAATACCCCAAAAGTCAACTAGCTAAACAAATCAGTAACAGAAAATTAAACCCAACAGTAAAAGAAAACCGATGAAAGTGGGTGAGGAGGGCGACTGGACCAAATAATTTCAACCAGAAGCCAAGCAAGCCAAAGATAGCGATGAATTCAATATAACAATTAAAAATGACTCTTTACTTTGAAATGATGAATCCCAAGGGGAAAAATTAAAATTAAAAAACAGGGGAAAATAACAAAGCTGACATTTGAATCTACCAACAAAGCTACTTCGGTTGAAAACAATAATAAAACAGATTGGTGGGGAAATTCTAACAACAAGGGTTGAAAATCAAAAGTAAATCCAATCAGATCCCAAAAGCATCGGTGGGCAAAACCCACTTTACACTACAGCGACTGAACGAGAATTGAATCGGAGGGTACGAAATTGAATTAAATCGACAAAAGGGGGGAAGTGAAGTGGTGTAACCTTGAGAAGTGTTGGAGGAGGGGTTGATGTGAGCTCCCAATTCCTTCTTTTTCTTGGCAGCTTTTCTCTTCTTAGCACCTGAAGGCATGATGGGGGCTGGAGAACAAAACAATGGGAGTTTCTCCGCTGCCTCAGAATTCGAAATTCTCCTTTTTTTTCTCCTTTTTGTTTCTCTTATGTGTGTGTGTAGAAATCGTGGGTGGGTTATAAAAATAGGATATGGCAGAGGAAAGGACAGGTGGGGGATGACGATCTGTAGGCTCCCTCTCCCTAAATTTGCTGAAGGGCAAGCGCCAATTCAGATTCCCAATCCTCTGCCGTTTTCATTTCCCAATTGCCCCAAAAGTTTTC

mRNA sequence

GGAAATTGATGGTAACTTTTAGATATATTGGCATCTATGGATTCGGCCAAGAATATAAGTCCCTCCATTGAAAAGCAAAAAAAGAAAGAGAGAAAAATGCATAAAATTTCCTCTCAAGGATGAGCCAAGCAAGAATGATTCATTTGCCCTTTACAACCAATTCTGACTCCTTTTGGCAAGCAAAGAACTTACCATCCTCCATTAAAATGCTTTACAACATTCAACTCTAGAACCTGAACAGAACTCATCCTCATCCCCAAAACTTTCTTTCTTCCAAATATGCAACCCGGAAAGCTGAAACCCATTACAGTGTCGATTTTGTTCTTCAATTTCTGCTTATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATGATGCAATTGATAATGGATTTGTTATTGGTCAAGACCTTGAAGTTCCTGCGCATTTTTCTCCAATTTTCTTTAAGATTGGAAATTCTGCCACTGGGTTCTTTGTTGTTTTTTCTTTTATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCCGGACACTTCTATTTTCGTTTATCTGATTCCAGCAACCTACCCCCTGCTGCTTCGCTAGCTCTCATCGCCTGCTTTCTAACTATTCTCGCCATGGGGTTTGCTTGGAAAGAGGTTTCAATAACAGTCATGAGTGGGCAATTGATGGCATTGGAGGCTTTCGTGATCATCCTTTCAGTGACGCAGTTAATTTATACTGCAATCATCCTGTGGAGCTCAACCAACTAGCAGATTCTAGAAATAGTGTTCAACGAACACTCTGTTCGTGGGTTTGTCTTCGATTTTCTGTTCATTCTTTATTTTTCTCGATTCAGTTCTTCGTCCCGATCATGTACAGGGGAAACTTGCAATGTGCTGGCAGATGAAGATGTATAGACAATAATATGACAATTGGTGTGCGAAACAAGAAGAATAAAATTTCAATAACTTTGATGATGACTTCATTTGCTCTGTAACAGTTTCGGCAGTATGCATAAGTTTTTCCAGTAAAAGTACCACAAAAACTAACAGAAAAGAGCGAAAAAAGAGAAAAATATGTCGATATCAATTGAAAACAAAGTTGTTGTGGCCGAGCTTTCCACAAAAGACTAAACCATGTATGAATGATAGAAACGCAATGCATACGTCGAGAGAGAGTTCATTCAGCTAAGGCAATATAGCAGATGTCATATAATGATGAAAATAAGGTGATAACTAATTTATCAACATAATTGAAACATTTATGATAGTTTAATTGCGCAGCATCTTACTAACGCAAAATCGAGAACATTACGCTCCAAGAAAAGAGAACTCACTGTAAGACAAAAGACATGTAGTACGGGAATGTCTTCATGTTGCTAGCTTCTACATCCAAGAATATCATCTACCTTAGGCTGGGCTCATCAAGTTCGACATCTATCCTATCGTGCTCCTGTAAACACCCTGGCTGTTTAAACCTTCACCCGTCCTCTGAAGACTTTTGCATCCCTGCCAGAACATGATATAAATTAATCTGAGTGCCAACCAAATTTCAGATTATATTGTTCTAAAAAGGAAACCATTATTGAAGTGCATAAGTTAATCTGAAAATTTGAGATCAGTAGGCATGAATTAAGTGAATTCAATATCAACAAACAAGTTTGAAATAATTGGAGCTCGCAATTATAACAACCAGCCCTTGTGGTGGTGAGCACAGATCATAAAGAAACCAATCATCACAGTCCAACAGAGTAAATAAAAGACCTTAGAATGCAGAGCTATATCATCAGACTTTTAAAAATTTTTTATTTTTATTTTTACTGAATAGGATCAGAAACTCAGGATGGGTGAAGTTTTGAAATAGTTGTGTTTGACACAAGACTATTTCTAATAAAAACGTGGACCATATCACAAAAAATGAGTAATTGTAAGTCCCAAGTTTTTTTATTCAGGTTTATAATGTTCGAGCTCACACCACCATTACACACAGATTAGCGATTACATTCTCAACCATAAACAACTTCCTCATATGAGCAAAACTTGATATTGAACAAGGTAATCATTGTTAAACAAAAAGGTTAGTTTCCAATCTAACCCTATATATAGAAACTGTATGCAAAGTTATCGGTTGGAGCCTGTAAATACATCACATAAACCACAGCAACTCCACCATGAGGTCCTTTGTGGCACCGCTGGTCTCGACCCAATAAATGGCTGCACAAAAAAGCTTCATTTCTCAACGAAGAATTAAAATAAGACGTGCTGCTATGTAAGCAATAACAATAAATTGAAAAAAAAAAAAAGAAAAAACCTGATCTTCAGATTCGGGTTTGAAATTTTCTGGACATTCAGAAACTTCGATATGTACTGCAAAATTACTAGTTTCAGTCATACCAACTAAGAATGGCAGTGATATTTTCAGTCTAAGTCTTTCAGATGCAGATTTAAAGGCATCAGAAGAAGAGCCCTTATTAACTAACAGATTCACCTGATAAGTGTAAATCTCTATCTTCATCTTGTTTTAATGATAGATCCGTTGGAGCTGATACTGGCACATTTGTAACTTCAGGCAAGCGCGTCCCCAACTTTTCTGAAGCAATTATATCAGGTATGGCAGTATTTTCAACAGATGCACTTTCAACAATGCTGATAGTTTCCTCAGATGCCGAGACCTCTGGTGTAACCGAGTACACAATAGAGGCAGCAGTTGGTACAACCAAATCATTGGTCTTCCCATCCAGTACCTATTCATCCACCTTGTAAGTTTTTAGAGGTGGAAACTTATAATGTCTATAACAGTATGTTTCAGATTCAGCTTTAGACACCAGACTACATACCTCAGAATTCTTTGTTGTATCTACAGATTCATCGTCTGAACTGCTACTACTACTACGATCATTAGCACATGATCCTTCAACAGACTCATTCTGAACAGTACCATTTTTGCTCTCAGAAGCAAGTCCTACTTTTTGATTAGTCTCTATATTGCTCAGAACCCTAGAACTAGATGAGCTGCTCTCTTGTATTTCCTTATTCCCCTCACCAAATGGATTGCTGTGGCTTGGGTGATTCTGAGAAGCTGGGGAATCGAGCTCACCACTGTCACTTCCCTTATCATCTTGGCTCTTAACATCATCATTTCCTGACATGGAGAATTTTAGTCAGAACAAATCAACACAGAGTTCTGCTAATCGCCAGATGGAAAAAATGGTAGAGTTATTTCAGAGAGCAGGCTCCATATATATGAGGTAATGAAACAACGCCCTGTAATCCAATTCAAGTCAAACCACTCTCTCCAAAACAATCAGCGAACTGAAGTCCAAAATACCCCAAAAGTCAACTAGCTAAACAAATCAGTAACAGAAAATTAAACCCAACAGTAAAAGAAAACCGATGAAAGTGGGTGAGGAGGGCGACTGGACCAAATAATTTCAACCAGAAGCCAAGCAAGCCAAAGATAGCGATGAATTCAATATAACAATTAAAAATGACTCTTTACTTTGAAATGATGAATCCCAAGGGGAAAAATTAAAATTAAAAAACAGGGGAAAATAACAAAGCTGACATTTGAATCTACCAACAAAGCTACTTCGGTTGAAAACAATAATAAAACAGATTGGTGGGGAAATTCTAACAACAAGGGTTGAAAATCAAAAGTAAATCCAATCAGATCCCAAAAGCATCGGTGGGCAAAACCCACTTTACACTACAGCGACTGAACGAGAATTGAATCGGAGGGTACGAAATTGAATTAAATCGACAAAAGGGGGGAAGTGAAGTGGTGTAACCTTGAGAAGTGTTGGAGGAGGGGTTGATGTGAGCTCCCAATTCCTTCTTTTTCTTGGCAGCTTTTCTCTTCTTAGCACCTGAAGGCATGATGGGGGCTGGAGAACAAAACAATGGGAGTTTCTCCGCTGCCTCAGAATTCGAAATTCTCCTTTTTTTTCTCCTTTTTGTTTCTCTTATGTGTGTGTGTAGAAATCGTGGGTGGGTTATAAAAATAGGATATGGCAGAGGAAAGGACAGGTGGGGGATGACGATCTGTAGGCTCCCTCTCCCTAAATTTGCTGAAGGGCAAGCGCCAATTCAGATTCCCAATCCTCTGCCGTTTTCATTTCCCAATTGCCCCAAAAGTTTTC

Coding sequence (CDS)

ATGCAACCCGGAAAGCTGAAACCCATTACAGTGTCGATTTTGTTCTTCAATTTCTGCTTATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATGATGCAATTGATAATGGATTTGTTATTGGTCAAGACCTTGAAGTTCCTGCGCATTTTTCTCCAATTTTCTTTAAGATTGGAAATTCTGCCACTGGGTTCTTTGTTGTTTTTTCTTTTATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCCGGACACTTCTATTTTCGTTTATCTGATTCCAGCAACCTACCCCCTGCTGCTTCGCTAGCTCTCATCGCCTGCTTTCTAACTATTCTCGCCATGGGGTTTGCTTGGAAAGAGGTTTCAATAACAGTCATGAGTGGGCAATTGATGGCATTGGAGGCTTTCGTGATCATCCTTTCAGTGACGCAGTTAATTTATACTGCAATCATCCTGTGGAGCTCAACCAACTAG

Protein sequence

MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN

Homology

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BLAST of MC01g1517.1 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 13  ILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATGFFVVFSF 72
           +L  N  + +++ G   W +N  I NG     +   P          GN AT +F+VF+ 
Sbjct: 12  LLVLNLIMYLIVIGFASWNLNHYI-NG-----ETNHPG-------VAGNGATFYFLVFAI 71

Query: 73  IAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSITVMSG-QL 132
           +A V   AS L+G  + R   + +L   A+ ALIA  +T LA G A KE+ I    G +L
Sbjct: 72  LAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRL 131

Query: 133 MALEAFVIILSVTQLIYTAII 153
             LEAFVIIL+ TQL+Y A++
Sbjct: 132 RVLEAFVIILAFTQLLYVAML 139

[Close]

BLAST of MC01g1517.1 vs. NCBI nr
Match: XP_022142232.1 (uncharacterized protein LOC111012398 [Momordica charantia])

HSP 1 Score: 303 bits (776), Expect = 1.42e-103
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG 60
           MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG
Sbjct: 1   MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG 60

Query: 61  NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK 120
           NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK
Sbjct: 61  NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK 120

Query: 121 EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN
Sbjct: 121 EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158

[Close]

BLAST of MC01g1517.1 vs. NCBI nr
Match: XP_038882133.1 (uncharacterized protein LOC120073380 isoform X2 [Benincasa hispida])

HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 117/153 (76.47%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  +DNGFVIG   EVP +FSPIFF+IGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTMDNGFVIGAGFEVPQYFSPIFFQIGNSATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG FYFR SDSSNLPPAAS ALIACFLT LAMGFAWKE+++T
Sbjct: 61  FFVIFALIAAVAVVASAISGSFYFRFSDSSNLPPAASTALIACFLTFLAMGFAWKEIALT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEAF+IILSVTQ +YTAII+W+ST 
Sbjct: 121 VTSGHLIALEAFLIILSVTQFVYTAIIVWTSTG 153

[Close]

BLAST of MC01g1517.1 vs. NCBI nr
Match: KAA0052579.1 (AWPM-19-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 8.98e-74
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of MC01g1517.1 vs. NCBI nr
Match: XP_008439689.1 (PREDICTED: uncharacterized protein LOC103484407 [Cucumis melo])

HSP 1 Score: 227 bits (579), Expect = 1.28e-73
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRYSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of MC01g1517.1 vs. NCBI nr
Match: TYK13246.1 (uncharacterized protein E5676_scaffold255G008640 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 2.69e-73
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 34  MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 93

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 94  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 153

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 154 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 186

[Close]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL
Match: A0A6J1CM66 (uncharacterized protein LOC111012398 OS=Momordica charantia OX=3673 GN=LOC111012398 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 6.88e-104
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG 60
           MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG
Sbjct: 1   MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG 60

Query: 61  NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK 120
           NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK
Sbjct: 61  NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK 120

Query: 121 EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN
Sbjct: 121 EVSITVMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158

[Close]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL
Match: A0A5A7UGF2 (AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001840 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.35e-74
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL
Match: A0A1S3AZB2 (uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=4 SV=1)

HSP 1 Score: 227 bits (579), Expect = 6.17e-74
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRYSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL
Match: A0A5D3CS83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008640 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.30e-73
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           +K I   ILFFNFC+CIVIFGIGGWVMN  IDNGFVIG   +VP +FSPIFF+IGNSATG
Sbjct: 34  MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 93

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFV+F+ IAAVAVVAS +SG+FYFR SD++NLPPAAS AL+ACFLT LAMGFAWKE+++T
Sbjct: 94  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 153

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V SG L+ALEA +I+LSVTQ +YTAII+W+ST+
Sbjct: 154 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 186

[Close]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL
Match: A0A6J1IM08 (uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636 PE=4 SV=1)

HSP 1 Score: 221 bits (564), Expect = 1.55e-71
Identity = 113/153 (73.86%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 6   LKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATG 65
           ++ I  SI FFNFC+ ++IFGIGGWVMN +IDNGFVIG + EVP +FSPIFF+IGN+ATG
Sbjct: 1   MEAIAASISFFNFCISVIIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 66  FFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSIT 125
           FFVVF+ IAAVA VASV+SG FYFR S+ +NLPPAAS ALIACFLT LAMGFAWKE+S T
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFRFSNPNNLPPAASSALIACFLTFLAMGFAWKEISQT 120

Query: 126 VMSGQLMALEAFVIILSVTQLIYTAIILWSSTN 158
           V S  LMALEAF+IILSVTQ IYTAII+W+ST+
Sbjct: 121 VTSEHLMALEAFLIILSVTQFIYTAIIVWTSTS 153

[Close]

BLAST of MC01g1517.1 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-38
Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 5   KLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSAT 64
           ++KP+   +L  NFC+ +++ GIGGW MN AID+GF +G +LE+PAHFSPI+F +GN+AT
Sbjct: 5   QIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAAT 64

Query: 65  GFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSI 124
           GFFV+F+ +A V   AS +SG  + R     +LP AA+ A IA  LT+LAMGFAWKE+ +
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 125 TVMSGQLMALEAFVIILSVTQLIYTAII 153
              + +L  +EAF+IILSVTQLIY A +
Sbjct: 125 QGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of MC01g1517.1 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-34
Identity = 74/148 (50.00%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 5   KLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSAT 64
           ++KP+   +L  NFC+  ++ GIG W MN AI++GF+IG D  +PAHFSPI F +GN+AT
Sbjct: 5   QMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAAT 64

Query: 65  GFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSI 124
           GFF++F+ IA VA  ASV+SG  + +   +++LP A S A IA  LT+LAMGF  KE+ +
Sbjct: 65  GFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL 124

Query: 125 TVMSGQLMALEAFVIILSVTQLIYTAII 153
            + + +L  +EAF+IILS TQL+Y A I
Sbjct: 125 GMRNARLRTMEAFLIILSATQLLYIAAI 152

[Close]

BLAST of MC01g1517.1 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 62/152 (40.79%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 1   MQPGKLKPITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIG 60
           M  G  K     +L  N  L  VI  I  W +N  I+        L +PA   PI+F +G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NSATGFFVVFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWK 120
           N ATGFFV+F+ IA V  +A+ L+G       DS NL  AA+ +LI+  LT+LAMG A K
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EVSITVMSGQLMALEAFVIILSVTQLIYTAII 153
           E++I      L  LE   II+S TQL+ T  I
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAI 152

[Close]

BLAST of MC01g1517.1 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.9e-12
Identity = 52/145 (35.86%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 9   ITVSILFFNFCLCIVIFGIGGWVMNDAIDNGFVIGQDLEVPAHFSPIFFKIGNSATGFFV 68
           I   +LF N  + +++ G   W +N      ++ GQ         P F   GN AT FF+
Sbjct: 9   IAAPLLFLNLVMYLIVLGFASWCLNK-----YINGQTNH------PSFG--GNGATPFFL 68

Query: 69  VFSFIAAVAVVASVLSGHFYFRLSDSSNLPPAASLALIACFLTILAMGFAWKEVSITVMS 128
            FS +AAV  VAS L+G  + R   + +L  A + +++A  +T LAMG A K+++I    
Sbjct: 69  TFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWR 128

Query: 129 G-QLMALEAFVIILSVTQLIYTAII 153
           G +L  +EAF+IIL+ TQL+Y  +I
Sbjct: 129 GWRLKMIEAFIIILTFTQLLYLMLI 140

The following BLAST results are available for this feature:

BLAST of MC01g1517.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	4.1e-09	36.88	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of MC01g1517.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142232.1	1.42e-103	100.00	uncharacterized protein LOC111012398 [Momordica charantia]	[more]
XP_038882133.1	9.40e-76	76.47	uncharacterized protein LOC120073380 isoform X2 [Benincasa hispida]	[more]
KAA0052579.1	8.98e-74	73.20	AWPM-19-like protein [Cucumis melo var. makuwa]	[more]
XP_008439689.1	1.28e-73	73.20	PREDICTED: uncharacterized protein LOC103484407 [Cucumis melo]	[more]
TYK13246.1	2.69e-73	73.20	uncharacterized protein E5676_scaffold255G008640 [Cucumis melo var. makuwa]	[more]

BLAST of MC01g1517.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM66	6.88e-104	100.00	uncharacterized protein LOC111012398 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7UGF2	4.35e-74	73.20	AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120...	[more]
A0A1S3AZB2	6.17e-74	73.20	uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=...	[more]
A0A5D3CS83	1.30e-73	73.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1IM08	1.55e-71	73.86	uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636...	[more]

BLAST of MC01g1517.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29520.1	2.5e-38	52.70	AWPM-19-like family protein	[more]
AT5G46530.1	4.9e-34	50.00	AWPM-19-like family protein	[more]
AT5G18970.1	4.5e-19	40.79	AWPM-19-like family protein	[more]
AT1G04560.1	6.9e-12	35.86	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..152 e-value: 3.2E-42 score: 144.1
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..156
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..156

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC01g1517	MC01g1517	gene

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1517.1-utr3	MC01g1517.1-utr3-MC01:19493700..19497067	utr3

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1517.1-cds	MC01g1517.1-cds-MC01:19497068..19497151	CDS
MC01g1517.1-cds	MC01g1517.1-cds-MC01:19497290..19497335	CDS
MC01g1517.1-cds	MC01g1517.1-cds-MC01:19497588..19497807	CDS
MC01g1517.1-cds	MC01g1517.1-cds-MC01:19497918..19498044	CDS

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1517.1-utr5	MC01g1517.1-utr5-MC01:19498045..19498323	utr5

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC01g1517.1	MC01g1517.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane