MC00g_new1006.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new1006.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	scaffold60: 835315 .. 835587 (+)
Sequence length	273
RNA-Seq Expression	MC00g_new1006.1
Synteny	MC00g_new1006.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGAGAAGAAAAGCGAGAGTGGGTACCAGAACTCTCAGATCTGGCCAGACGGTAGCAGAATTCTTGGACGTCGAGAGACGACGGTGATGGGATCGCCAAAGCCGCACTGCTGCTGTGATGCCGCGTTGCCGTGGGTCGTCGCCGGAGAGGCTCGCTGCCGCCGTGGGATGCCAACCGGAGAAGAAGGAGAAGAGAGTGGTGGGGGCGGCGAAGAAGAAGGAGAAGAAGACAAAGAAGAAGAAGAAATTTGGGAGAGGGCAGGCGGCTGA

mRNA sequence

ATGCTGGAGAAGAAAAGCGAGAGTGGGTACCAGAACTCTCAGATCTGGCCAGACGGTAGCAGAATTCTTGGACGTCGAGAGACGACGGTGATGGGATCGCCAAAGCCGCACTGCTGCTGTGATGCCGCGTTGCCGTGGGTCGTCGCCGGAGAGGCTCGCTGCCGCCGTGGGATGCCAACCGGAGAAGAAGGAGAAGAGAGTGGTGGGGGCGGCGAAGAAGAAGGAGAAGAAGACAAAGAAGAAGAAGAAATTTGGGAGAGGGCAGGCGGCTGA

Coding sequence (CDS)

ATGCTGGAGAAGAAAAGCGAGAGTGGGTACCAGAACTCTCAGATCTGGCCAGACGGTAGCAGAATTCTTGGACGTCGAGAGACGACGGTGATGGGATCGCCAAAGCCGCACTGCTGCTGTGATGCCGCGTTGCCGTGGGTCGTCGCCGGAGAGGCTCGCTGCCGCCGTGGGATGCCAACCGGAGAAGAAGGAGAAGAGAGTGGTGGGGGCGGCGAAGAAGAAGGAGAAGAAGACAAAGAAGAAGAAGAAATTTGGGAGAGGGCAGGCGGCTGA

Protein sequence

MLEKKSESGYQNSQIWPDGSRILGRRETTVMGSPKPHCCCDAALPWVVAGEARCRRGMPTGEEGEESGGGGEEEGEEDKEEEEIWERAGG

Homology

The following BLAST results are available for this feature:

BLAST of MC00g_new1006.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new1006.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new1006.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new1006.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC00g_new1006	MC00g_new1006	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC00g_new1006.1-cds	MC00g_new1006.1-cds-scaffold60:835315..835587	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC00g_new1006.1	MC00g_new1006.1-protein	polypeptide