MC00g0039.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0039.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	chaperone protein dnaJ 20, chloroplastic-like
Location	scaffold31: 654518 .. 654907 (+)
Sequence length	390
RNA-Seq Expression	MC00g0039.1
Synteny	MC00g0039.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTGGCGTTCCCTGCGGCGGCCACCGATGACTACTACAAGTTGCTTTCGGTGAGCGGCGGGAGCGGCGCGAGTAGTGAGGAGATAAAGAGGGCTTATAGGGCCATGGCCTTGCAGTATCATCCCGACGTTTGCGGTGACCCCTCCATGAAGGAGCAGTTCACCAGGATTTTTGTTCGGCTCAATGCTGCTTACAAGACGCTCTCAGACCCGGTTCTGAGACGAGAGTACGACGACTCCGTGATGGGGCTGGAGAGTTTCCCGCGTGGAAGGAGCTTTGAGGGAGACAAAAGCGTGTGGCAGTGGCAGATTATTGAGCTCCAACGGCGGTCCGCTGATCTCCGGAGGGATCGGTCCTCGTGGGGTGCTCGAATGCGGGCGCAAAACTGT

mRNA sequence

GCAGTGGCGTTCCCTGCGGCGGCCACCGATGACTACTACAAGTTGCTTTCGGTGAGCGGCGGGAGCGGCGCGAGTAGTGAGGAGATAAAGAGGGCTTATAGGGCCATGGCCTTGCAGTATCATCCCGACGTTTGCGGTGACCCCTCCATGAAGGAGCAGTTCACCAGGATTTTTGTTCGGCTCAATGCTGCTTACAAGACGCTCTCAGACCCGGTTCTGAGACGAGAGTACGACGACTCCGTGATGGGGCTGGAGAGTTTCCCGCGTGGAAGGAGCTTTGAGGGAGACAAAAGCGTGTGGCAGTGGCAGATTATTGAGCTCCAACGGCGGTCCGCTGATCTCCGGAGGGATCGGTCCTCGTGGGGTGCTCGAATGCGGGCGCAAAACTGT

Coding sequence (CDS)

GCAGTGGCGTTCCCTGCGGCGGCCACCGATGACTACTACAAGTTGCTTTCGGTGAGCGGCGGGAGCGGCGCGAGTAGTGAGGAGATAAAGAGGGCTTATAGGGCCATGGCCTTGCAGTATCATCCCGACGTTTGCGGTGACCCCTCCATGAAGGAGCAGTTCACCAGGATTTTTGTTCGGCTCAATGCTGCTTACAAGACGCTCTCAGACCCGGTTCTGAGACGAGAGTACGACGACTCCGTGATGGGGCTGGAGAGTTTCCCGCGTGGAAGGAGCTTTGAGGGAGACAAAAGCGTGTGGCAGTGGCAGATTATTGAGCTCCAACGGCGGTCCGCTGATCTCCGGAGGGATCGGTCCTCGTGGGGTGCTCGAATGCGGGCGCAAAACTGT

Protein sequence

AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRAQNC

Homology

[Close]

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot
Match: Q9NVH1 (DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LS
Sbjct: 13  EDYYSLLNVR--REASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLS 72

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRD 118
           DP  R  YD  + G     RG   EG      W+++E +R  A++R +
Sbjct: 73  DPQTRAIYD--IYG----KRGLEMEG------WEVVERRRTPAEIREE 106

[Close]

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot
Match: Q5U458 (DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LS
Sbjct: 13  EDYYSLLNVR--REASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLS 72

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRD 118
           DP  R  YD  + G     RG   EG      W+++E +R  A++R +
Sbjct: 73  DPQTRAIYD--IYG----KRGLEMEG------WEVVERKRTPAEIREE 106

[Close]

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot
Match: Q5RC70 (DnaJ homolog subfamily C member 11 OS=Pongo abelii OX=9601 GN=DNAJC11 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LS
Sbjct: 13  EDYYSLLNVR--REASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLS 72

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRD 118
           DP  R  YD  + G     RG   EG      W+++E +R  A++R +
Sbjct: 73  DPQTRAIYD--IYG----KRGLEMEG------WEVVERRRTPAEIREE 106

[Close]

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot
Match: Q2NL21 (DnaJ homolog subfamily C member 11 OS=Bos taurus OX=9913 GN=DNAJC11 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           +DYY LL+V     AS EE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LS
Sbjct: 13  EDYYSLLNVR--REASCEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLS 72

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRD 118
           DP  R  YD  + G     RG   EG      W+++E +R  A++R +
Sbjct: 73  DPQTRAIYD--IYG----KRGLEMEG------WEVVERRRTPAEIREE 106

[Close]

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 54/138 (39.13%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 5   PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN 64
           P   ++D  +Y LL V+     +  EIK+AY+ +A +YHPDV   P   E++T  F+R+ 
Sbjct: 58  PVKQSEDLSFYDLLGVT--ESVTLPEIKQAYKQLARKYHPDV-SPPDRVEEYTDRFIRVQ 117

Query: 65  AAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV----------WQWQIIELQRR 124
            AY+TLSDP  R  YD D  MG   SF   R    D+ V          WQ Q+  L+RR
Sbjct: 118 EAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRR 177

Query: 125 SADLRRDRSSWGARMRAQ 129
           S     +  SW ARMR Q
Sbjct: 178 SNQKDNNTMSWAARMRRQ 192

[Close]

BLAST of MC00g0039.1 vs. NCBI nr
Match: XP_022141929.1 (chaperone protein dnaJ 20, chloroplastic-like [Momordica charantia])

HSP 1 Score: 263 bits (673), Expect = 1.63e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR 60
           AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR
Sbjct: 15  AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR 74

Query: 61  LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS 120
           LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS
Sbjct: 75  LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS 134

Query: 121 WGARMRAQNC 130
           WGARMRAQNC
Sbjct: 135 WGARMRAQNC 144

[Close]

BLAST of MC00g0039.1 vs. NCBI nr
Match: XP_022963776.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6571688.1 Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011414.1 Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163 bits (412), Expect = 9.18e-49
Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 11  DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
           DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSD
Sbjct: 23  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 82

Query: 71  PVLRREYDDSVMGLE---SFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMR 129
           PVLRR+YDDS+MGL    S+ RG  FE D++VWQ QI+EL+RRSA  +RDRS SWG RMR
Sbjct: 83  PVLRRQYDDSMMGLNNGYSYERG-GFEVDRTVWQRQILELKRRSA-CQRDRSVSWGGRMR 142

[Close]

BLAST of MC00g0039.1 vs. NCBI nr
Match: XP_022967659.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 162 bits (411), Expect = 1.30e-48
Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 11  DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
           DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSD
Sbjct: 23  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 82

Query: 71  PVLRREYDDSVMGLE---SFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMR 129
           PVLRR+YDDS+MGL    S+ R R FE D++VWQ QI+EL+RRSA  +RDRS SWG RMR
Sbjct: 83  PVLRRQYDDSMMGLNNGYSYER-RGFEVDRTVWQRQILELKRRSA-CQRDRSVSWGGRMR 142

[Close]

BLAST of MC00g0039.1 vs. NCBI nr
Match: XP_038888723.1 (dnaJ homolog subfamily A member 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 159 bits (402), Expect = 6.81e-47
Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 11  DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
           DYYKLLSVSGG  AS+EEIK+AYRAMALQYHPD+  DP +KEQ TRIFV+LNAAYKTLSD
Sbjct: 49  DYYKLLSVSGGCNASNEEIKKAYRAMALQYHPDLVCDPLLKEQSTRIFVQLNAAYKTLSD 108

Query: 71  PVLRREYDDSVMGLES--FPRGR-SFEGDKSVWQWQIIELQRRSADLRRDRS---SWGAR 129
           PVLRR+YD S+MG  +  F  GR  F+ D +VWQ Q++EL+RRSA LRRDRS   SWGA 
Sbjct: 109 PVLRRQYDASLMGFNNNGFSNGRRGFQADTTVWQRQLLELKRRSA-LRRDRSAKASWGAT 168

[Close]

BLAST of MC00g0039.1 vs. NCBI nr
Match: XP_008455532.1 (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo] >KAA0031496.1 chaperone protein dnaJ 20 [Cucumis melo var. makuwa] >TYK06949.1 chaperone protein dnaJ 20 [Cucumis melo var. makuwa])

HSP 1 Score: 157 bits (398), Expect = 1.97e-46
Identity = 84/124 (67.74%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LNAAYKTLS
Sbjct: 42  DNYYKLLSVSGGCNASPEEIKKAYRAMALRYHPDLVCDPSLKEQSTRMFVQLNAAYKTLS 101

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKS-VWQWQIIELQRRSADLRRDRS---SWGARM 129
           DPVLRR+YDDS+MG  +    + F+GD + VWQ QI+EL+RRS+ LR+DRS   SW ARM
Sbjct: 102 DPVLRRQYDDSLMGFNT----KRFQGDSAAVWQRQILELKRRSS-LRKDRSAPASWAARM 160

[Close]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL
Match: A0A6J1CK55 (chaperone protein dnaJ 20, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012184 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 7.90e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR 60
           AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR
Sbjct: 15  AVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVR 74

Query: 61  LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS 120
           LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS
Sbjct: 75  LNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSS 134

Query: 121 WGARMRAQNC 130
           WGARMRAQNC
Sbjct: 135 WGARMRAQNC 144

[Close]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL
Match: A0A6J1HH09 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463967 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 4.44e-49
Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 11  DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
           DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSD
Sbjct: 23  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 82

Query: 71  PVLRREYDDSVMGLE---SFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMR 129
           PVLRR+YDDS+MGL    S+ RG  FE D++VWQ QI+EL+RRSA  +RDRS SWG RMR
Sbjct: 83  PVLRRQYDDSMMGLNNGYSYERG-GFEVDRTVWQRQILELKRRSA-CQRDRSVSWGGRMR 142

[Close]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL
Match: A0A6J1HXC8 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467103 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 6.31e-49
Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 11  DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
           DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSD
Sbjct: 23  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 82

Query: 71  PVLRREYDDSVMGLE---SFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMR 129
           PVLRR+YDDS+MGL    S+ R R FE D++VWQ QI+EL+RRSA  +RDRS SWG RMR
Sbjct: 83  PVLRRQYDDSMMGLNNGYSYER-RGFEVDRTVWQRQILELKRRSA-CQRDRSVSWGGRMR 142

[Close]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL
Match: A0A5A7SN90 (Chaperone protein dnaJ 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002620 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 9.52e-47
Identity = 84/124 (67.74%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LNAAYKTLS
Sbjct: 42  DNYYKLLSVSGGCNASPEEIKKAYRAMALRYHPDLVCDPSLKEQSTRMFVQLNAAYKTLS 101

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKS-VWQWQIIELQRRSADLRRDRS---SWGARM 129
           DPVLRR+YDDS+MG  +    + F+GD + VWQ QI+EL+RRS+ LR+DRS   SW ARM
Sbjct: 102 DPVLRRQYDDSLMGFNT----KRFQGDSAAVWQRQILELKRRSS-LRKDRSAPASWAARM 160

[Close]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL
Match: A0A1S3C0P6 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495683 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 9.52e-47
Identity = 84/124 (67.74%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 10  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLS 69
           D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LNAAYKTLS
Sbjct: 42  DNYYKLLSVSGGCNASPEEIKKAYRAMALRYHPDLVCDPSLKEQSTRMFVQLNAAYKTLS 101

Query: 70  DPVLRREYDDSVMGLESFPRGRSFEGDKS-VWQWQIIELQRRSADLRRDRS---SWGARM 129
           DPVLRR+YDDS+MG  +    + F+GD + VWQ QI+EL+RRS+ LR+DRS   SW ARM
Sbjct: 102 DPVLRRQYDDSLMGFNT----KRFQGDSAAVWQRQILELKRRSS-LRKDRSAPASWAARM 160

[Close]

BLAST of MC00g0039.1 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14
Identity = 54/138 (39.13%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 5   PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN 64
           P   ++D  +Y LL V+     +  EIK+AY+ +A +YHPDV   P   E++T  F+R+ 
Sbjct: 58  PVKQSEDLSFYDLLGVT--ESVTLPEIKQAYKQLARKYHPDV-SPPDRVEEYTDRFIRVQ 117

Query: 65  AAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV----------WQWQIIELQRR 124
            AY+TLSDP  R  YD D  MG   SF   R    D+ V          WQ Q+  L+RR
Sbjct: 118 EAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRR 177

Query: 125 SADLRRDRSSWGARMRAQ 129
           S     +  SW ARMR Q
Sbjct: 178 SNQKDNNTMSWAARMRRQ 192

[Close]

BLAST of MC00g0039.1 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 7   AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYK 66
           A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+
Sbjct: 71  ATSGDYYATLGVS--KSANNKEIKAAYRRLARQYHPDVNKEPGATEKFKEI----SAAYE 130

Query: 67  TLSDPVLRREYD 79
            LSD   R  YD
Sbjct: 131 VLSDEQKRALYD 136

[Close]

BLAST of MC00g0039.1 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 7   AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYK 66
           A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+
Sbjct: 71  ATSGDYYATLGVS--KSANNKEIKAAYRRLARQYHPDVNKEPGATEKFKEI----SAAYE 130

Query: 67  TLSDPVLRREYD 79
            LSD   R  YD
Sbjct: 131 VLSDEQKRALYD 136

[Close]

BLAST of MC00g0039.1 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 7   AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYK 66
           A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+
Sbjct: 71  ATSGDYYATLGVS--KSANNKEIKAAYRRLARQYHPDVNKEPGATEKFKEI----SAAYE 130

Query: 67  TLSDPVLRREYD 79
            LSD   R  YD
Sbjct: 131 VLSDEQKRALYD 136

[Close]

BLAST of MC00g0039.1 vs. TAIR 10
Match: AT2G35720.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 11 DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSD 70
          + Y LL++S    AS EEI++AYR  A  YHPD    P MKE  T  F R+  AY+ LSD
Sbjct: 15 ELYALLNLS--PEASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQRICEAYEILSD 74

Query: 71 PVLRREYDDSVMGLESFPRG 91
             R  YD  + G+E    G
Sbjct: 75 ETKRLIYD--LYGMEGLNSG 90

The following BLAST results are available for this feature:

BLAST of MC00g0039.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NVH1	1.7e-13	40.74	DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2	[more]
Q5U458	1.7e-13	40.74	DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2	[more]
Q5RC70	1.7e-13	40.74	DnaJ homolog subfamily C member 11 OS=Pongo abelii OX=9601 GN=DNAJC11 PE=2 SV=1	[more]
Q2NL21	6.5e-13	39.81	DnaJ homolog subfamily C member 11 OS=Bos taurus OX=9913 GN=DNAJC11 PE=2 SV=1	[more]
Q9SDN0	6.5e-13	39.13	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]

BLAST of MC00g0039.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141929.1	1.63e-88	100.00	chaperone protein dnaJ 20, chloroplastic-like [Momordica charantia]	[more]
XP_022963776.1	9.18e-49	71.54	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548...	[more]
XP_022967659.1	1.30e-48	71.54	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]	[more]
XP_038888723.1	6.81e-47	68.80	dnaJ homolog subfamily A member 3, mitochondrial-like [Benincasa hispida]	[more]
XP_008455532.1	1.97e-46	67.74	PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo] >KAA0031...	[more]

BLAST of MC00g0039.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CK55	7.90e-89	100.00	chaperone protein dnaJ 20, chloroplastic-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1HH09	4.44e-49	71.54	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HXC8	6.31e-49	71.54	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5A7SN90	9.52e-47	67.74	Chaperone protein dnaJ 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C0P6	9.52e-47	67.74	chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of MC00g0039.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13830.2	4.7e-14	39.13	DNAJ-like 20	[more]
AT1G80030.1	2.0e-09	47.22	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.3	2.0e-09	47.22	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.2	2.0e-09	47.22	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT2G35720.1	3.4e-09	43.75	DNAJ heat shock N-terminal domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 15..33 score: 32.51 coord: 33..48 score: 44.83 coord: 53..73 score: 30.68
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 10..73 e-value: 9.1E-20 score: 81.7
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 11..78 e-value: 6.2E-19 score: 67.9
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 11..81 score: 17.451414
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 11..70 e-value: 1.51458E-13 score: 58.7109
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 4..93 e-value: 8.3E-23 score: 82.6
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 9..95
None	No IPR available	PANTHER	PTHR45090	CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC	coord: 9..129
None	No IPR available	PANTHER	PTHR45090:SF8	CHAPERONE DNAJ DOMAIN PROTEIN	coord: 9..129

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC00g0039	MC00g0039	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC00g0039.1-cds	MC00g0039.1-cds-scaffold31:654518..654907	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC00g0039.1	MC00g0039.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0009507	chloroplast