Lsi11G015050.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G015050.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cytochrome b6-f complex iron-sulfur subunit
Location	chr11: 23526976 .. 23530096 (+)
Sequence length	1184
RNA-Seq Expression	Lsi11G015050.1
Synteny	Lsi11G015050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGAACTCTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTGTCCCTTTTGTGGACATCAAAAACTCAGCATCCTCACAAACAATCTCTCAAATTTCTACACCAACCATTGATATAACATTACCCACATTTTAGTTTCTGAGAATTCCTCTCCATTCCTTGCTCTGATCCATCCATGGCGTCCTCCACTCTATCTTCTGCAACTCCTTCACAGGTATCTTCAATTTCTTGATTGAACTTCACTGATCTTGTAACCAACTTGAAATTTGTTGCCCATTGTTGTTGTTTTTTTCAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCTACTAGTATTCCGGCTGATCGAGTCCCGGATATGGATAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGTCTTCCCACTGCTACTATGTTGTATCCTTATACCTATTTCTTTGTCCCTCCTGGGTAAGTGTTCTTCTCTTTGATTCTGTAATGGCCTGCTGGATTATCAAGGATTAGCATCTTTTGGTTTTGTTCTTGAAAAGATATTAGGCTTTGGTTGATGAATGGTTTGTTTAGAGGATGATTTTGAGATCTCTGATTAGATGAAAATTGTGTTGTTGATGGGAATTCTGATGAAATTTGGTAATATAAGAGCAAACATTTGACTGTCTAATATTACTATTTGTAATAGCCAAATTTTTATGATGAATGAATGAAGAAGCTACACCTTTTTACCATGTTAATTGATTGTCTATATTCTTCCATTGATTATCGTTGTACTGACACTCATTACTCAACTGGTATGAGAAACTTTTTGTAATATTGTGTGAAATGAAAATATGCTTGTAAATGGCACAAGCTGTGCTTGAAATTGAAAAGCATCTTTAAGTTGGGTTATGTCCTCTTTCATCAGGTGGATTATTGCTTGTAGTAAAACTATGTTGGCCATGATCTTAAAAGCTATTAGTTTTGGTTAAATTGTATAAAATACTCCTAAACTCCGTTTTTTAAATGCCCTTATACATTTCAAAAGTTGCAAGATTGCCTTTGATTTTCATAAACCTTATACCATTGGAGTAGAAATCGGACAAAAATTGAGATTTGGAAAGGTATGACAATGACCTAGAACATCAATTTGGATTGCCACACCATTCTAGGTCCAATTTCTATCCGAAATTCTAAATGATTTGTAATCCAAAGGTGATTTAAAAATGTTTATGAAAGGTTAAGGGTAATGTTACAACTTTTGAAAGAATAAGGGTATATATTTATTTATATGTAGAACTCTTATATCTTTCAAGAGTTGCAAAATTGTCATTGACCTTTCATAAACCTTATACCATTAGACTAGAATTCATTTAGAATTTCAGGAAGAAATTGGGACTTGAAATGGTGTAGTGGTGACTTAGGATGGAAATTTTGATCACCACACCTTTCTAGGTTCCAATTTCTATCCAAAATTCTAAATGATTTCTACTTCTAAGGTAATTTTGAAATGTTTATGAAAGGTGGATCAAGGGTAATATTACAACTTTTGAAAGAATATGTTATATATATATATATATATATATATATATATATATTTAATGAGATGAATAGGGGTACTTTTAAAACAAGAGCAAAGTGGAGGTGTATTTTTTTATAATTTACTCCTTAGTCTTTAATCTTTTAAACTGGATTTTAATTTCAAGAACTGAGATTCTGTACTTGCTGCATTCTGATTGTTCATGTGGTAACCTTTTGAACCTTTTCTGTATACAATTTCAGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACACGGCCCTGGAGACCGAACCCTCACACAGGGATTGAGGGTACTGTAACTCTCTAACTTTGCTTAATGAATGTTGTAAATATTCTGAGCAGCTACAACCCTTGTTGCTTCCCAAAGACCTTATGTTTCTCTGTTTCACATGTTTATTTAACTTCGAAGTAGTAACATGATTATTGATCAGCTCCCATTGAGATTAGCATACTCAAAACAGAAAAATGGAACATGCATATTTGGAAGTCTTATTGAAAAGAATATAACCAGAGTATTCAAATTACAAAAACTAGATTGAAAAATACACATCTGATATCATATGGCAAGTTCCATAATAGAAATGTGGTGCTTACACAAAGTTATGAGTTTCTGAGGGTTAATTCCTATTTGCTGTGATACTTAGAGATGAACAAATAGTATGTGCATTTAAAGGCAAACTGGTGATGATGGATTTCAGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACGTATGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAATGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTCTGGTAGTACTTCTAAAACCTTTTTCCTTTTGCTTCCATGCCATTTAAAGGCCTTTAAACAAGCAACAAGCTTTATCTACTAACTATAAGATTATGTGTTGATTAGTAGTAACTAAATAGAGTTGAAATTTTCTTTGTTGGGACAGTCTCTTGCATTGGTTCATGCTGATGTAGACGACGGGAAGGTAGTGTTTGTCCCGTGGGTGGAAACCGATTTCAGAACTGGGGAGAATCCATGGTGGGCTTAAGCCTCTTTCTCATGTAAACATCTCTCCACATCCATCTCTTCAATTTGAAGCAAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGGTTTTGTTGGATGAAATATATAAAATACAATACAATTGAACTCTAGGCTTTGTATCGATAAGCTTTGATATTAAGTACCACTCTATATTGTTCTACTTTCTCTTCATCTTGTATTCAGTACAATGGATTCAGGGTGTATTAGCTAGCTGCTGCAAATAACAGTCTTATATAGTTCATAATCATATGCATCGTTATTAGACTCCAAGTCA

mRNA sequence

TGTGAACTCTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTGTCCCTTTTGTGGACATCAAAAACTCAGCATCCTCACAAACAATCTCTCAAATTTCTACACCAACCATTGATATAACATTACCCACATTTTAGTTTCTGAGAATTCCTCTCCATTCCTTGCTCTGATCCATCCATGGCGTCCTCCACTCTATCTTCTGCAACTCCTTCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCTACTAGTATTCCGGCTGATCGAGTCCCGGATATGGATAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGTCTTCCCACTGCTACTATGTTGTATCCTTATACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACACGGCCCTGGAGACCGAACCCTCACACAGGGATTGAGGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACGTATGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAATGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTCTGTCTCTTGCATTGGTTCATGCTGATGTAGACGACGGGAAGGTAGTGTTTGTCCCGTGGGTGGAAACCGATTTCAGAACTGGGGAGAATCCATGGTGGGCTTAAGCCTCTTTCTCATGTAAACATCTCTCCACATCCATCTCTTCAATTTGAAGCAAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGGTTTTGTTGGATGAAATATATAAAATACAATACAATTGAACTCTAGGCTTTGTATCGATAAGCTTTGATATTAAGTACCACTCTATATTGTTCTACTTTCTCTTCATCTTGTATTCAGTACAATGGATTCAGGGTGTATTAGCTAGCTGCTGCAAATAACAGTCTTATATAGTTCATAATCATATGCATCGTTATTAGACTCCAAGTCA

Coding sequence (CDS)

ATGGCGTCCTCCACTCTATCTTCTGCAACTCCTTCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCTACTAGTATTCCGGCTGATCGAGTCCCGGATATGGATAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGTCTTCCCACTGCTACTATGTTGTATCCTTATACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACACGGCCCTGGAGACCGAACCCTCACACAGGGATTGAGGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACGTATGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAATGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTCTGTCTCTTGCATTGGTTCATGCTGATGTAGACGACGGGAAGGTAGTGTTTGTCCCGTGGGTGGAAACCGATTTCAGAACTGGGGAGAATCCATGGTGGGCTTAA

Protein sequence

MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA

Homology

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BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot
Match: P26291 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3888 GN=petC PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.2e-100
Identity = 176/230 (76.52%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG-KEVKISCQATSIPADRVP 60
           M+S+TLS  TPSQLC+ +S + CPS ALL KP  TQM  +G K +KI+CQATSIPADRVP
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVP 60

Query: 61  DMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLK 120
           DM KRKT+NLLLLGA+ LPTA ML PY  F VPPG+G + GG VAKDA+GNDV A EWLK
Sbjct: 61  DMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLK 120

Query: 121 AHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGS 180
            H PGDRTLTQGL+GDPTYLVVEKD+TLAT+ INAVCTHLGCVVP+N AENKFICPCHGS
Sbjct: 121 THAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGS 180

Query: 181 QYNDQGRVVRGPAPLSLALVHAD--VDDGKVVFVPWVETDFRTGENPWWA 228
           QYNDQGRVVRGPAPLSLAL H D  V+DGKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230

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BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot
Match: P08980 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea OX=3562 GN=petC PE=1 SV=2)

HSP 1 Score: 358.6 bits (919), Expect = 5.2e-98
Identity = 171/229 (74.67%), Postives = 192/229 (83.84%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG--KEVKISCQATSIPADRV 60
           MAS TLSSATPSQLC+S++ +F PS AL +  +   + +K   + +K++CQATSIPAD V
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWL 120
           PDM KR+T+NLLLLGA+ LPT  ML PY  FFVPPG G   GG +AKDALGNDV A EWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHG 180
           K H PGDRTLTQGL+GDPTYLVVE DKTLAT+GINAVCTHLGCVVP+NAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           SQYN+QGRVVRGPAPLSLAL H DVDDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229

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BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot
Match: Q9ZR03 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=petC PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.5e-97
Identity = 178/231 (77.06%), Postives = 193/231 (83.55%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP--KNTQMGAKGK-EVKISCQATSIPADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP   N QM  K K  ++ISCQA+SIPADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEW 120
           VPDM+KRKT+NLLLLGA+ LPT  ML PY  FFVPPGTGG GGG  AKDALGNDV A EW
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEW 120

Query: 121 LKAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK HGPGDRTLTQGL+GDPTYLVVE DKTLATYGINAVCTHLGCVVPWN AENKF+CPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDD-GKVVFVPWVETDFRTGENPWWA 228
           GSQYN QGRVVRGPAPLSLAL HAD+D+ GKV+FVPWVETDFRTG+ PWW+
Sbjct: 181 GSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

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BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot
Match: P30361 (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=petC1 PE=2 SV=2)

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96
Identity = 176/230 (76.52%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKEVKISCQATSIPA-DR 60
           MASSTLS  T  QLC+S+S L   SQ LL KP   N+    K K +K+ C ATSIPA DR
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEW 120
           VPDM+KR  MNLLLLGA+ LPTA ML PY  FFVPPG+GG  GG  AKDALGNDV A EW
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 LKAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK H PG+RTLTQGL+GDPTYLVVE D TLATYGINAVCTHLGCVVP+NAAENKFICPCH
Sbjct: 121 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           GSQYN+QGRVVRGPAPLSLAL HAD+DDGKVVFVPWVETDFRTGE+PWWA
Sbjct: 181 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228

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BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot
Match: Q02585 (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=petC2 PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.3e-96
Identity = 175/230 (76.09%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKEVKISCQATSIPA-DR 60
           MASSTLS  T  QLC+S+S L   SQ LL KP   N+    K K +K+ C ATSIPA DR
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEW 120
           VPDM+KR  MNLLLLGA+ LPTA ML PY  FF PPG+GG  GG  AKDALGNDV A EW
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 LKAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK H PG+RTLTQGL+GDPTYLVVE D TLATYGINAVCTHLGCVVP+NAAENKFICPCH
Sbjct: 121 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           GSQYN+QGRVVRGPAPLSLAL HAD+DDGKVVFVPWVETDFRTGE PWWA
Sbjct: 181 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228

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BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL
Match: E7E844 (Plastoquinol--plastocyanin reductase OS=Citrullus lanatus OX=3654 GN=PetC PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.3e-128
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL
Match: A0A1S3C1Z0 (Plastoquinol--plastocyanin reductase OS=Cucumis melo OX=3656 GN=LOC103495550 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 2.9e-128
Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL
Match: I7K435 (Plastoquinol--plastocyanin reductase OS=Cucumis sativus OX=3659 GN=PetC PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.0e-128
Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDVFADEWLKA
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

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BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL
Match: A0A5D3C581 (Plastoquinol--plastocyanin reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003790 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMG KGKE+KISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGVKGKEIKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL
Match: A0A6J1HXA3 (Plastoquinol--plastocyanin reductase OS=Cucurbita maxima OX=3661 GN=LOC111468309 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.3e-125
Identity = 217/227 (95.59%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VK+ CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKVCCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDV ADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVLADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLRGDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. NCBI nr
Match: ADU05416.1 (chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus])

HSP 1 Score: 468.8 bits (1205), Expect = 2.7e-128
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. NCBI nr
Match: XP_008455364.1 (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.0e-128
Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. NCBI nr
Match: NP_001267704.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus] >KGN43571.1 hypothetical protein Csa_020244 [Cucumis sativus] >CCJ09121.1 Rieske type ion sulfur subunit [Cucumis sativus])

HSP 1 Score: 466.8 bits (1200), Expect = 1.0e-127
Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDVFADEWLKA
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. NCBI nr
Match: XP_038888589.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Benincasa hispida])

HSP 1 Score: 466.5 bits (1199), Expect = 1.3e-127
Identity = 221/227 (97.36%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+TQMG+KGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSTQMGSKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWN AENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. NCBI nr
Match: KAA0031609.1 (cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa] >TYK07061.1 cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMG KGKE+KISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGVKGKEIKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of Lsi11G015050.1 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 354.8 bits (909), Expect = 5.3e-98
Identity = 178/231 (77.06%), Postives = 193/231 (83.55%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP--KNTQMGAKGK-EVKISCQATSIPADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP   N QM  K K  ++ISCQA+SIPADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEW 120
           VPDM+KRKT+NLLLLGA+ LPT  ML PY  FFVPPGTGG GGG  AKDALGNDV A EW
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEW 120

Query: 121 LKAHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK HGPGDRTLTQGL+GDPTYLVVE DKTLATYGINAVCTHLGCVVPWN AENKF+CPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDD-GKVVFVPWVETDFRTGENPWWA 228
           GSQYN QGRVVRGPAPLSLAL HAD+D+ GKV+FVPWVETDFRTG+ PWW+
Sbjct: 181 GSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

[Close]

BLAST of Lsi11G015050.1 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 340.9 bits (873), Expect = 7.9e-94
Identity = 163/207 (78.74%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 25  SQALLRKP--KNTQMGAKGK-EVKISCQATSIPADRVPDMDKRKTMNLLLLGAIGLPTAT 84
           S  L  KP   N QM  K K  ++ISCQA+SIPADRVPDM+KRKT+NLLLLGA+ LPT  
Sbjct: 4   SSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGY 63

Query: 85  MLYPYTYFFVPPGTGGAGGGIVAKDALGNDVFADEWLKAHGPGDRTLTQGLRGDPTYLVV 144
           ML PY  FFVPPGTGG GGG  AKDALGNDV A EWLK HGPGDRTLTQGL+GDPTYLVV
Sbjct: 64  MLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYLVV 123

Query: 145 EKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALVHA 204
           E DKTLATYGINAVCTHLGCVVPWN AENKF+CPCHGSQYN QGRVVRGPAPLSLAL HA
Sbjct: 124 ENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHA 183

Query: 205 DVDD-GKVVFVPWVETDFRTGENPWWA 228
           D+D+ GKV+FVPWVETDFRTG+ PWW+
Sbjct: 184 DIDEAGKVLFVPWVETDFRTGDAPWWS 210

[Close]

BLAST of Lsi11G015050.1 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 55.5 bits (132), Expect = 6.7e-08
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 155 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSL 197
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 214 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 256

[Close]

BLAST of Lsi11G015050.1 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 55.5 bits (132), Expect = 6.7e-08
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 155 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSL 197
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 216 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 258

The following BLAST results are available for this feature:

BLAST of Lsi11G015050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P26291	3.2e-100	76.52	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3...	[more]
P08980	5.2e-98	74.67	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea ...	[more]
Q9ZR03	7.5e-97	77.06	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thalia...	[more]
P30361	2.2e-96	76.52	Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacu...	[more]
Q02585	6.3e-96	76.09	Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacu...	[more]

BLAST of Lsi11G015050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E7E844	1.3e-128	98.68	Plastoquinol--plastocyanin reductase OS=Citrullus lanatus OX=3654 GN=PetC PE=2 S...	[more]
A0A1S3C1Z0	2.9e-128	97.80	Plastoquinol--plastocyanin reductase OS=Cucumis melo OX=3656 GN=LOC103495550 PE=...	[more]
I7K435	5.0e-128	97.80	Plastoquinol--plastocyanin reductase OS=Cucumis sativus OX=3659 GN=PetC PE=2 SV=...	[more]
A0A5D3C581	1.1e-127	96.92	Plastoquinol--plastocyanin reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1HXA3	2.3e-125	95.59	Plastoquinol--plastocyanin reductase OS=Cucurbita maxima OX=3661 GN=LOC111468309...	[more]

BLAST of Lsi11G015050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU05416.1	2.7e-128	98.68	chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus]	[more]
XP_008455364.1	6.0e-128	97.80	PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis m...	[more]
NP_001267704.1	1.0e-127	97.80	cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus...	[more]
XP_038888589.1	1.3e-127	97.36	cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Benincasa hispida]	[more]
KAA0031609.1	2.3e-127	96.92	cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa] >TYK07061...	[more]

BLAST of Lsi11G015050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03280.1	5.3e-98	77.06	photosynthetic electron transfer C	[more]
AT4G03280.2	7.9e-94	78.74	photosynthetic electron transfer C	[more]
AT5G13430.1	6.7e-08	53.49	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13440.1	6.7e-08	53.49	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 172..184 score: 61.15 coord: 184..196 score: 65.0 coord: 151..162 score: 67.08
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 134..196 e-value: 4.8E-12 score: 45.6
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 114..210 score: 22.346849
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 93..227 e-value: 2.2E-49 score: 168.6
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 56..226
None	No IPR available	GENE3D	1.20.5.700	Single helix bin	coord: 48..92 e-value: 3.0E-19 score: 70.6
None	No IPR available	PANTHER	PTHR10134:SF38	CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT	coord: 1..224
None	No IPR available	CDD	cd03471	Rieske_cytochrome_b6f	coord: 102..227 e-value: 1.52227E-94 score: 270.39
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..224
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	HAMAP	MF_01335	Cytb6_f_Rieske	coord: 50..227 score: 39.605343

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G015050	Lsi11G015050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015050.1.exon.1	Lsi11G015050.1.exon.1	exon
Lsi11G015050.1.exon.2	Lsi11G015050.1.exon.2	exon
Lsi11G015050.1.exon.3	Lsi11G015050.1.exon.3	exon
Lsi11G015050.1.exon.4	Lsi11G015050.1.exon.4	exon
Lsi11G015050.1.exon.5	Lsi11G015050.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015050.1.five_prime_UTR.1	Lsi11G015050.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015050.1.CDS.1	Lsi11G015050.1.CDS.1	CDS
Lsi11G015050.1.CDS.2	Lsi11G015050.1.CDS.2	CDS
Lsi11G015050.1.CDS.3	Lsi11G015050.1.CDS.3	CDS
Lsi11G015050.1.CDS.4	Lsi11G015050.1.CDS.4	CDS
Lsi11G015050.1.CDS.5	Lsi11G015050.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015050.1.three_prime_UTR.1	Lsi11G015050.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G015050.1	Lsi11G015050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009496	plastoquinol--plastocyanin reductase activity