Lsi10G008130.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G008130.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr10: 11180940 .. 11182222 (+)
Sequence length1050
RNA-Seq ExpressionLsi10G008130.1
SyntenyLsi10G008130.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACGCCATTTTTTTCTTTTACCATGGTATACTTCACAGAAATCCGATGGGAAATGCTCAATCATCCTGAACGATGAAGACCAATCTTTAAAGAGTAGAATCATTCTTCTTGTAAGAGAGGTGGTATATAGGGATATTATAGAGTCCCCACCTCCCCTATACGATGTTGTCCTCTTGTATAGATAGTTTGAAGAGTGGCACGTGGGTCCTAATTCGTCGTGGATAGCTTGGGTTCTCAATCTCCCATGTATGACAATACTCAAAATGAAAATCTCGAGCATATGCTAGTCATCAAAAACGACAATATTTAAGAGGAAGCAATGAAGTCATCCGACTTGGAAATGAAAAGGCTGTGGCGGAACCATCAAATTCGAAGATGGAAAAGTTGCCGTGAAATCATCGAATTTGGATATGGAGAAGTTGTGGCAGAACCCTCGAACTTGGAGATGGAAAAACTAGAGCGAAATCATCGAATTTGGAAATGGAGAAACTGCAGCGGAACCATCAAACTTAGAGATGGAAAGGCTACAGATGGAACCATGGAACTTGGGGATGGAAAGGTTGCGGGCAGAACCATCAAATTTGGAGATCGACAAGCTGCGACGAAAGCATCGAACTTGAAGATGGACAAGCTGCGACGCAACCATCGTGCTTGGAGATGGAGAAGCTACGGTGAAACCATCGTGCTTGGAGATGGAGAAGCTGCGGTGAACCCATCAAACTTAGAGATGGAAAGGTTGCAGTGGAACCATCAAATTTGGAGATGGAAAGGTTGCGGTGGAACCATCCAACTTGGAGATGGAAAAACTACACCGAAACCACGAACTTAGAGATGGAAAGGCTGTGGCAAAACCATTGAACTTGGAGATGGAAAAGGTAAGGCAAAATCATCGTGCTTGGAGATGGAGAAGTTGCGGTGGACCCATCGAACTTGGAGATGGAAAGGCTGCAGCAGAACCATTGAATTTGGAGATGGAAAAACTGCGACAAAACCATCAAACTTAGAGATGGAAAGATGCGGCAGAACCATCGAACTTGGGGATGGAAAAGCTACGGTGAACCATCGAATTTAGAGATGGAATAACTACGGCGAAACCATCAAATTTGAAGATGGTGAAGCTACAATGAAACCATCAAACTTGAAGATGGAAAAACTGTGGCAAAGTCATTTAATTTGGAGATGGGAAGGCTACAACGATGGCATCGAATTTGAAAATGAACAAGCCATGGTGAAACCATCGAATTTGAAAATGGAAAGGTTGCAGCAGAACCATCTTGCATAG

mRNA sequence

GAACGCCATTTTTTTCTTTTACCATGGTATACTTCACAGAAATCCGATGGGAAATGCTCAATCATCCTGAACGATGAAGACCAATCTTTAAAGAGTAGAATCATTCTTCTTGTAAGAGAGGTGTCATCCGACTTGGAAATGAAAAGGCTGTGGCGGAACCATCAAATTCGAAGATGGAAAAGTTGCCGTGAAATCATCGAATTTGGATATGGAGAAGTTGTGGCAGAACCCTCGAACTTGGAGATGGAAAAACTAGAGCGAAATCATCGAATTTGGAAATGGAGAAACTGCAGCGGAACCATCAAACTTAGAGATGGAAAGGCTACAGATGGAACCATGGAACTTGGGGATGGAAAGGTTGCGGGCAGAACCATCAAATTTGGAGATCGACAAGCTGCGACGAAAGCATCGAACTTGAAGATGGACAAGCTGCGACGCAACCATCGTGCTTGGAGATGGAGAAGCTACGGTGAAACCATCGTGCTTGGAGATGGAGAAGCTGCGGTGAACCCATCAAACTTAGAGATGGAAAGTGGAACCATCAAATTTGGAGATGGAAAGGTTGCGGTGGAACCATCCAACTTGGAGATGGAAAAACTACACCGAAACCACGAACTTAGAGATGGAAAGGCTGTGGCAAAACCATTGAACTTGGAGATGGAAAAGGCAAAATCATCGTGCTTGGAGATGGAGAAGTTGCGGTGGACCCATCGAACTTGGAGATGGAAAGGCTGCAGCAGAACCATTGAATTTGGAGATGGAAAAACTGCGACAAAACCATCAAACTTAGAGATGGAAAGATGCGGCAGAACCATCGAACTTGGGGATGGAAAAGCTACGAGATGGAATAACTACGGCGAAACCATCAAATTTGAAGATGGTGAAGCTACAATGAAACCATCAAACTTGAAGATGGAAAAACTGTGGCAAAGTCATTTAATTTGGAGATGGGAAGGCTACAACGATGGCATCGAATTTGAAAATGAACAAGCCATGGTGAAACCATCGAATTTGAAAATGGAAAGGTTGCAGCAGAACCATCTTGCATAG

Coding sequence (CDS)

GAACGCCATTTTTTTCTTTTACCATGGTATACTTCACAGAAATCCGATGGGAAATGCTCAATCATCCTGAACGATGAAGACCAATCTTTAAAGAGTAGAATCATTCTTCTTGTAAGAGAGGTGTCATCCGACTTGGAAATGAAAAGGCTGTGGCGGAACCATCAAATTCGAAGATGGAAAAGTTGCCGTGAAATCATCGAATTTGGATATGGAGAAGTTGTGGCAGAACCCTCGAACTTGGAGATGGAAAAACTAGAGCGAAATCATCGAATTTGGAAATGGAGAAACTGCAGCGGAACCATCAAACTTAGAGATGGAAAGGCTACAGATGGAACCATGGAACTTGGGGATGGAAAGGTTGCGGGCAGAACCATCAAATTTGGAGATCGACAAGCTGCGACGAAAGCATCGAACTTGAAGATGGACAAGCTGCGACGCAACCATCGTGCTTGGAGATGGAGAAGCTACGGTGAAACCATCGTGCTTGGAGATGGAGAAGCTGCGGTGAACCCATCAAACTTAGAGATGGAAAGTGGAACCATCAAATTTGGAGATGGAAAGGTTGCGGTGGAACCATCCAACTTGGAGATGGAAAAACTACACCGAAACCACGAACTTAGAGATGGAAAGGCTGTGGCAAAACCATTGAACTTGGAGATGGAAAAGGCAAAATCATCGTGCTTGGAGATGGAGAAGTTGCGGTGGACCCATCGAACTTGGAGATGGAAAGGCTGCAGCAGAACCATTGAATTTGGAGATGGAAAAACTGCGACAAAACCATCAAACTTAGAGATGGAAAGATGCGGCAGAACCATCGAACTTGGGGATGGAAAAGCTACGAGATGGAATAACTACGGCGAAACCATCAAATTTGAAGATGGTGAAGCTACAATGAAACCATCAAACTTGAAGATGGAAAAACTGTGGCAAAGTCATTTAATTTGGAGATGGGAAGGCTACAACGATGGCATCGAATTTGAAAATGAACAAGCCATGGTGAAACCATCGAATTTGAAAATGGAAAGGTTGCAGCAGAACCATCTTGCATAG

Protein sequence

ERHFFLLPWYTSQKSDGKCSIILNDEDQSLKSRIILLVREVSSDLEMKRLWRNHQIRRWKSCREIIEFGYGEVVAEPSNLEMEKLERNHRIWKWRNCSGTIKLRDGKATDGTMELGDGKVAGRTIKFGDRQAATKASNLKMDKLRRNHRAWRWRSYGETIVLGDGEAAVNPSNLEMESGTIKFGDGKVAVEPSNLEMEKLHRNHELRDGKAVAKPLNLEMEKAKSSCLEMEKLRWTHRTWRWKGCSRTIEFGDGKTATKPSNLEMERCGRTIELGDGKATRWNNYGETIKFEDGEATMKPSNLKMEKLWQSHLIWRWEGYNDGIEFENEQAMVKPSNLKMERLQQNHLA
Homology
The following BLAST results are available for this feature:
BLAST of Lsi10G008130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi10G008130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi10G008130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi10G008130.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi10G008130Lsi10G008130gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi10G008130.1.exon.1Lsi10G008130.1.exon.1exon
Lsi10G008130.1.exon.2Lsi10G008130.1.exon.2exon
Lsi10G008130.1.exon.3Lsi10G008130.1.exon.3exon
Lsi10G008130.1.exon.4Lsi10G008130.1.exon.4exon
Lsi10G008130.1.exon.5Lsi10G008130.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi10G008130.1.CDS.1Lsi10G008130.1.CDS.1CDS
Lsi10G008130.1.CDS.2Lsi10G008130.1.CDS.2CDS
Lsi10G008130.1.CDS.3Lsi10G008130.1.CDS.3CDS
Lsi10G008130.1.CDS.4Lsi10G008130.1.CDS.4CDS
Lsi10G008130.1.CDS.5Lsi10G008130.1.CDS.5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi10G008130.1Lsi10G008130.1-proteinpolypeptide