Lsi09G018270.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G018270.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Serine/threonine-protein kinase pakD isoform X1
Location	chr09: 27101081 .. 27101704 (-)
Sequence length	624
RNA-Seq Expression	Lsi09G018270.1
Synteny	Lsi09G018270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACTACAAATGGGACGTTCAATTCCAAGGCCAATGAATTCTCAAGAATTGGGAATAATAATTCCAATAACAATAACAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAATCATATCACTCATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAATCGCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAAGCAATGATGCAAGTGAGAAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATTGACATACATATAA

mRNA sequence

ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACTACAAATGGGACGTTCAATTCCAAGGCCAATGAATTCTCAAGAATTGGGAATAATAATTCCAATAACAATAACAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAATCATATCACTCATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAATCGCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAAGCAATGATGCAAGTGAGAAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATTGACATACATATAA

Coding sequence (CDS)

ATGCATGATATGAAATTGGTATTGGACAGGAAGCCCTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAAGTTCAAAATCAAGAGAAATCACAATTCCAACTACAAATGGGACGTTCAATTCCAAGGCCAATGAATTCTCAAGAATTGGGAATAATAATTCCAATAACAATAACAATAATAAGCACAACAAAATGAGAAAATGCACTTCTCTAAAGTTAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATCCCACCAAGGAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAATGGCAATCATATCACTCATGAAAGAGTATTTCTTCCAAGTGCAAGAGTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAATCGCTCACCGACGACGTTTTGATGCGAAGATTCGTCGTCGAAGAAGAAGCAATGATGCAAGTGAGAAGGAGAAACCAAATGGAAGTTATAAGGAAAAGGAATTTGATGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATTGACATACATATAA

Protein sequence

MHDMKLVLDRKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKKLGPSPLSKMVIAEEEQLTYI

Homology

[Close]

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL
Match: A0A5D3DLW3 (Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001260 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 172/206 (83.50%), Postives = 178/206 (86.41%), Query Frame = 0


Query: 6   LVLDRKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNK 65
           +V  RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN 
Sbjct: 1   MVFSRKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNN 60

Query: 66  HNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--- 125
           +NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+   
Sbjct: 61  NNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNG 120

Query: 126 -----ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI 185
                ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI
Sbjct: 121 NNNHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI 180

Query: 186 RKRNLM-RRKKLGPSPLSKMVIAEEE 203
           RKRNLM RRKKLGPSPLSKMVIAEEE
Sbjct: 181 RKRNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL
Match: A0A0A0KBW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82
Identity = 174/210 (82.86%), Postives = 183/210 (87.14%), Query Frame = 0


Query: 6   LVLDRKPWYQRAMEIVGTQWK-TSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNN 65
           +V  RKPWYQRAMEIVGTQWK TSSK+REITI T NG FNSKA       NN +NNNN++
Sbjct: 1   MVFRRKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKA-------NNGNNNNNSS 60

Query: 66  KHNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH-- 125
           K+NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+  
Sbjct: 61  KYNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNN 120

Query: 126 --------ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQM 185
                   ITHERV LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQM
Sbjct: 121 GNNTTNHIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQM 180

Query: 186 EVIRKRNLM-RRKKLGPSPLSKMVIAEEEQ 204
           EVIRKRNLM RRKKLGPSPLSKMVIAEEEQ
Sbjct: 181 EVIRKRNLMRRRKKLGPSPLSKMVIAEEEQ 203

[Close]

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL
Match: A0A1S3CBM1 (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 171/202 (84.65%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNKM 69
           RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN +NKM
Sbjct: 12  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNNNNKM 71

Query: 70  RKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH------- 129
           RKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+       
Sbjct: 72  RKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNH 131

Query: 130 -ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 189
            ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN
Sbjct: 132 IITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 191

Query: 190 LM-RRKKLGPSPLSKMVIAEEE 203
           LM RRKKLGPSPLSKMVIAEEE
Sbjct: 192 LMRRRKKLGPSPLSKMVIAEEE 203

[Close]

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL
Match: A0A1S3CBJ3 (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 171/202 (84.65%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNKM 69
           RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN +NKM
Sbjct: 11  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNNNNKM 70

Query: 70  RKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH------- 129
           RKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+       
Sbjct: 71  RKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNH 130

Query: 130 -ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 189
            ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN
Sbjct: 131 IITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 190

Query: 190 LM-RRKKLGPSPLSKMVIAEEE 203
           LM RRKKLGPSPLSKMVIAEEE
Sbjct: 191 LMRRRKKLGPSPLSKMVIAEEE 202

[Close]

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL
Match: A0A6J1KR77 (uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.3e-70
Identity = 151/194 (77.84%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWK-TSSKSR-EITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHN 69
           RKPWYQRAMEIVGTQW+ TSSKSR +  IP+ NG FNS               N+NNKHN
Sbjct: 10  RKPWYQRAMEIVGTQWRTTSSKSRDQYPIPSPNGAFNS---------------NSNNKHN 69

Query: 70  KMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNHITHER 129
           KMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQA+IPPRRSHSYPRSKPFPT     T   
Sbjct: 70  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQADIPPRRSHSYPRSKPFPTT----TTNN 129

Query: 130 VFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKK 189
           + LP+ ++SGE+SRR FRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKK
Sbjct: 130 IVLPTPQLSGENSRRVFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRKK 184

Query: 190 LGPSPLSKMVIAEE 202
           LGPSPLSKMVIAEE
Sbjct: 190 LGPSPLSKMVIAEE 184

[Close]

BLAST of Lsi09G018270.1 vs. NCBI nr
Match: XP_038875352.1 (diacylglycerol kinase A [Benincasa hispida])

HSP 1 Score: 339.0 bits (868), Expect = 3.0e-89
Identity = 180/199 (90.45%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWKTSSKSREIT-IPTTNGTFNSKANEFSRIGNNNSNNNN---NNK 69
           RKPWYQRAMEIVGTQWKTS KSRE+T IPTTNGT NSK NEFSRIGNNN++NN+   NNK
Sbjct: 10  RKPWYQRAMEIVGTQWKTSPKSREMTNIPTTNGTMNSKGNEFSRIGNNNNSNNSNNINNK 69

Query: 70  HNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPT-NGNHIT 129
           +NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPT N NHIT
Sbjct: 70  YNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNANHIT 129

Query: 130 HERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR 189
           HERV LP+AR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR
Sbjct: 130 HERVLLPTARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMR 189

Query: 190 RKKLGPSPLSKMVIAEEEQ 204
           RKKLGPSPLSKM+IAEEEQ
Sbjct: 190 RKKLGPSPLSKMIIAEEEQ 208

[Close]

BLAST of Lsi09G018270.1 vs. NCBI nr
Match: KAA0039919.1 (serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK24581.1 serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-82
Identity = 172/206 (83.50%), Postives = 178/206 (86.41%), Query Frame = 0


Query: 6   LVLDRKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNK 65
           +V  RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN 
Sbjct: 1   MVFSRKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNN 60

Query: 66  HNKMRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH--- 125
           +NKMRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+   
Sbjct: 61  NNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNG 120

Query: 126 -----ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI 185
                ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI
Sbjct: 121 NNNHIITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVI 180

Query: 186 RKRNLM-RRKKLGPSPLSKMVIAEEE 203
           RKRNLM RRKKLGPSPLSKMVIAEEE
Sbjct: 181 RKRNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]

BLAST of Lsi09G018270.1 vs. NCBI nr
Match: XP_008460010.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 171/202 (84.65%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNKM 69
           RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN +NKM
Sbjct: 12  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNNNNKM 71

Query: 70  RKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH------- 129
           RKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+       
Sbjct: 72  RKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNH 131

Query: 130 -ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 189
            ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN
Sbjct: 132 IITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 191

Query: 190 LM-RRKKLGPSPLSKMVIAEEE 203
           LM RRKKLGPSPLSKMVIAEEE
Sbjct: 192 LMRRRKKLGPSPLSKMVIAEEE 203

[Close]

BLAST of Lsi09G018270.1 vs. NCBI nr
Match: XP_008460011.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 171/202 (84.65%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWKTSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNKM 69
           RKPWYQRAMEIVGTQWKTSSKSREITI T NGTFNSKAN          N N NN +NKM
Sbjct: 11  RKPWYQRAMEIVGTQWKTSSKSREITITTPNGTFNSKAN----------NGNKNNNNNKM 70

Query: 70  RKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH------- 129
           RKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+       
Sbjct: 71  RKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNSNNNNGNNNH 130

Query: 130 -ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 189
            ITHER+ LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN
Sbjct: 131 IITHERILLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRN 190

Query: 190 LM-RRKKLGPSPLSKMVIAEEE 203
           LM RRKKLGPSPLSKMVIAEEE
Sbjct: 191 LMRRRKKLGPSPLSKMVIAEEE 202

[Close]

BLAST of Lsi09G018270.1 vs. NCBI nr
Match: XP_004140595.1 (probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 hypothetical protein Csa_005764 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 173/206 (83.98%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 10  RKPWYQRAMEIVGTQWK-TSSKSREITIPTTNGTFNSKANEFSRIGNNNSNNNNNNKHNK 69
           RKPWYQRAMEIVGTQWK TSSK+REITI T NG FNSKA       NN +NNNN++K+NK
Sbjct: 11  RKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKA-------NNGNNNNNSSKYNK 70

Query: 70  MRKCTSLKLATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNGNH------ 129
           MRKCTSLK+ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTN N+      
Sbjct: 71  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNT 130

Query: 130 ----ITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR 189
               ITHERV LPSAR+SGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR
Sbjct: 131 TNHIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIR 190

Query: 190 KRNLM-RRKKLGPSPLSKMVIAEEEQ 204
           KRNLM RRKKLGPSPLSKMVIAEEEQ
Sbjct: 191 KRNLMRRRKKLGPSPLSKMVIAEEEQ 209

[Close]

BLAST of Lsi09G018270.1 vs. TAIR 10
Match: AT3G59680.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 106/210 (50.48%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 5   KLVLDRKPWYQRAMEIV--GTQWKTSSKSR-----EITIPTTNGTFNSKANEFSRIGNNN 64
           K++ +RKPWYQRAM +    T W+T  KS      E   P+ N + NSK           
Sbjct: 8   KVMANRKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSK----------- 67

Query: 65  SNNNNNNKHNKMRKCTSLKL-ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPF 124
            ++N+N  ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP SKP 
Sbjct: 68  -SSNHNQIYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPPSKPL 127

Query: 125 PTNGNHITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVV-EEEAMMQVRRRNQME 184
           P          V + +AR+S +S RR FRGKSL ++ LMRRFVV EEEA+M+ R+R+QME
Sbjct: 128 P------METAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQME 187

Query: 185 VIRKRNLMRR-KKLGPSPLSKMVIAEEEQL 205
           ++RKRN MRR KKLGPSPLS+MVIAE++++
Sbjct: 188 IVRKRNQMRRKKKLGPSPLSRMVIAEDQEV 198

[Close]

BLAST of Lsi09G018270.1 vs. TAIR 10
Match: AT3G59680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 0


Query: 1   MHDMKLVLDRKPWYQRAMEIV--GTQWKTSSKSR-----EITIPTTNGTFNSKANEFSRI 60
           M D K    RKPWYQRAM +    T W+T  KS      E   P+ N + NSK       
Sbjct: 32  MQDSKASPARKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSK------- 91

Query: 61  GNNNSNNNNNNKHNKMRKCTSLKL-ATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR 120
                ++N+N  ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F +  +PPRRS SYP 
Sbjct: 92  -----SSNHNQIYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVF-RIHVPPRRSSSYPP 151

Query: 121 SKPFPTNGNHITHERVFLPSARVSGESSRRFFRGKSLTDDVLMRRFVV-EEEAMMQVRRR 180
           SKP P          V + +AR+S +S RR FRGKSL ++ LMRRFVV EEEA+M+ R+R
Sbjct: 152 SKPLP------METAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKR 211

Query: 181 NQMEVIRKRNLMRR-KKLGPSPLSKMVIAEEEQL 205
           +QME++RKRN MRR KKLGPSPLS+MVIAE++++
Sbjct: 212 DQMEIVRKRNQMRRKKKLGPSPLSRMVIAEDQEV 226

The following BLAST results are available for this feature:

BLAST of Lsi09G018270.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G018270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLW3	1.7e-82	83.50	Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KBW5	4.9e-82	82.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1	[more]
A0A1S3CBM1	1.1e-81	84.65	serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CBJ3	1.1e-81	84.65	serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KR77	4.3e-70	77.84	uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548...	[more]

BLAST of Lsi09G018270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875352.1	3.0e-89	90.45	diacylglycerol kinase A [Benincasa hispida]	[more]
KAA0039919.1	3.5e-82	83.50	serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008460010.1	2.3e-81	84.65	PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]	[more]
XP_008460011.1	2.3e-81	84.65	PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]	[more]
XP_004140595.1	3.9e-81	83.98	probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 ...	[more]

BLAST of Lsi09G018270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59680.1	1.1e-41	50.48	unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G59680.2	1.1e-41	50.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36772	SERINE/THREONINE-KINASE	coord: 1..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi09G018270	Lsi09G018270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G018270.1.exon.1	Lsi09G018270.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G018270.1.CDS.1	Lsi09G018270.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi09G018270.1	Lsi09G018270.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity