Lsi09G017250.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G017250.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMADS-box transcription factor 8-like
Locationchr09: 25839327 .. 25849934 (-)
Sequence length387
RNA-Seq ExpressionLsi09G017250.1
SyntenyLsi09G017250.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGAAAGTCTAATTGATAATGGTAGTGGTACAAAGGTGAGTGAGGATTTACAATCTCTAGTTAAGGTAATAAAAATATGTTTAACATGTCTACTAAACTATTGATAAATTACTAAACGTACTTTTCATATATGTACAATTTTTTTTTTTCAAATGACGTTTCATTACCGTTTCAAAGAGACTTTAGAAACTATTTTTATCAAATAGAAAGCACTTTTAAAAATGGAAGTAGTTATAGTATACTTCTTTAGTAAGTGTTTCATCTCAAAACACAAGCACACCAGACAAATACTAAGAAGGCTAGTTAGAAGTGCTTAAGCAGTTCACTATTCGATTTTTTTCCCTGGGTGGGGAATATTGTGAGTTTCATTGCGAAGGGGGGAAATTCTTGTATCTACTTTTTCTTTGAAATATAATCTTCAACTTCTTTCTGCTGCTTTTCTGCAGGACCATGAATCTGATGAGACAATCTTGGTTTCACTCACAAAGCTCCTACAAACTATTCAAAGGCAATTTTCTGTATTTTTTACTACAACCATTTTTTTTTATGTATTAGAATTGCTTAAATTTTGACTAGCGTGTTCTCATTTCCAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTTGATGTAACTCAGATGATGCAATTGGAGAATCAACTTGAAGGCACGCTTGACAAAATCAAATCTCAAAGAGTGAGTTCATTTATTTGTACCGCATATTCATCTAAGAATTTTCAACTTGTTAACCCTTAATGACTTCAAATGATTTCAAGTTCTCCACCAGTTACTCGTGTGTTACATAAACAAAACAAGGGCAAATTTTGCTAGATATATCATTACGTTGTCTTATATGTTGTTCTATACATCATATCAACTTTTCGAATTCCCTACCGAGACCCTGACTGGAAAATTTATATGGTGGTCCCCTTGGAAACTTATGGTATGTTGCATAGGATCATTTTAGGCAAATATAGCCTTTTCCTTGACTAATCTAACTAAAAGTCGAAGGCGCTTTTAGGGTATGTGAAAGCCTATTTTGGGATATGTGAATTTTTCTAGATTCGTTAGGCTCCTCGTGCTCATTGGTTTCAACTAGGAATAGCTCAGTTGTTGTTTTACATGTCTTTATCAATTATCATGTTTTCAAGTTTCTTCAGATGACATCTATTCTCTAGTTTAACTGAAGGATTGAAGGCACTTTTAGGGACTGTGAAAGCCTATTTTGGGATACGTGAAATTTCTAGGTCCATTAGGTTCTTCGTGCTGATTGATTTCAACTAGGAATAACCCTAATTGTTGTTTTTCCTGTCTTTATCAGATATCCTCTTTTCAAGTTTCTTCCCATTACATATATCCGTATTTTGAGGATGCTTTATCATGAAACTTTCAAGTTCAGTCATTTTCATCTCATTACAAGTATTTAGATGTTTCTTTGCTACATACTGTGCTAGCCAACTTTTGTCATCTTGTATGTGGGTCTGACCCCCCACTTCCTCTTTATTCTCCTTGCTTTGGAAAGTGTCCAATATAAGGTTAGATTCTTTTCCTAGTAGGTTATTACTCAAGGAAGAATTAACGCATTGATTACATCTTAATCGTCTTCTGTCATGTTGGGCCTACATAATGTAAGGAGGCATCGATGAATCTGGAGCATGTTCTGTGGGAATAGGACTATGTTAGAGGTCTAATTCCCCCTCCATGATTGAGGGGTGATTATTTGGCATGTAGCTTTATTTAGGCCTTGTCAAACATCTGGCTTGAGCGAAAGAGGATCCTTACGAACGAGGAAAGTTCTTGAGAGGAGCTTAGATCCTAGGCTAGGCTCATTACCTCCTCATTGGGTCTTAATGACTAACAATTTTGTTTTCCTATGGAGCATCTCGCTTGAGCAGAAACGGAGCATCTTTAAGCATGAATAAAGTTCTTGGAAGTTGGAAGGAGGTTGGGACCTAAACTGGCTTCATTACCTCCTATGGGTCTCAATTGCTAACAATTTTATCGATTATGTCTTTTTTGTTTAACAGTTTCTTGTTTTTGCTCCTTGTGACATGTATTTTCCCTCTGTTTCCCTTTTTGTATTGTACTTGTGTTTTTCCCCCTTCAATGGAAGTTGATTTCTTAATGGAAAGCAATTCTTCCATATTTTACATGAGTCATACCCACACATAAATAATAAGTGCATGGTGTGGAGACTCATTTGTGCAGATCTCATCATTCCTTTTTGGTGTTGTCCTACTCTGTGGTCCTCCAGGAGCTCTTTTGGTATATTCCAGAACATTATATCCCTTCAACGAACAGATATGTACGTGAGTTTTATATGTAGATGAGTTTTTCAACGGGTCATTTAGGCTAAATTGAATATGACTTGAAAAGAACTTTGTACTTTGTTTTGATAACATCCTGAACTTTCAAAGCTAGCAATAACACACTTAAACTTTCAAAAGGAGTTAAAAATTATCCTTATCATTAGGATATGAACTGAACTTTGTACCTCATTTCAATAATACTCCTGAACTTTCAAAAATTAAATTAATAGATTAACCTTTAAAAAGAAAGGTTCAAAAATGCGCTTACAGTATATGGACAAAAATTATCTATACCTCATCACTTATTCCATTTCCTTTCTCTCTTCTTGATGTAAGTAGAAAGGGGTTAAATTGGGTAATTGGATAAAAGTATAGGTTAATTCCCTTTTTACCCCCCACTTGTATTAAAACTCTATAAATAGGATTCTTCCTCCCATGTATGGACAATTAATGAAAAAAGATTTCTCTTCAAGAATTACTCCAAGATTTTAGTCTACATCAAAGTGGTATCAGAGCACCTCGGGAAAGGGATCGATGGGCGGGAAGAACCCCAAAAATACCGAACCAACTCTCACGGATGCAGAAGCATCTTTCTCCCCGCCAGCAGTCGAGCAGCAGCTTAAGGCATTAGAAAATGTTGTGAGTGTAATAAACAACACAATTTCTGGGATACAGCAAGCCATTGAGACACTTACAGCCGAAATTGAAAGAGCTTTTGCAGTCCACAACAAAGGAAAAGGCAAAGAAATCAACTACGGCAGTCAAGAAAATCAAGAAAATCCAAGAATGCAAGAAGTTGCAAGAAGTCCACCTAGAAGACAAATTTCAGAATTTCAACCAACAATCAATTACCAAAATCATCCAGTAGGTATTATTCCTCAACAACAAAGACCGATTCCACACAATATGATGGGATATGATTTGGACTCTTCAAACAATGAAGGTTGTTCACAATTCCACCAAAATTATTTTTCAAGGTACCCTCCTAACCCTTTGTATCAAGAAAACCATCTCCAAGCCCAAGAACCATACCAAGAACACAGAAATTATGGTCATAATGGCCTTGTTTTCTATCAAGAGAAGAATTATGGTCGACATTTTCAAGAAAGAGCAAGAAGTCCACCAAGACCCTTCATCTAGTTAAATCAAACAGGTATGAACAATTATAATTCAGTTTTTGAACAACACCATCCTCCTCATAGACCTTTTCTTCAAAATGTGGTTGGGTTTAATTTTGAAACATCAAAAGAAGAAGAAGTTGGTTGGCAAGGTTTTTCTCGATTTTCATATGAAAATCATGAGCAACAACACCAATTCAAGAATGTCAAAGAATGGGTTTAGAATGGTTTCAAATGGCATTCAATCAAATGTTCAAGAACATGTTGCTGTCCTTCAAGAACATCAAGGTAACCCATATCGAGTCCAAAATCAAGTGGTCATGCTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTATTATTTGACTATGCTCCCAATGGAACCAATTTTAACCGTTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACCATTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTATACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAATGGGTATTTGAACACCTACAACGCTTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGGTTGGTTTGGTCATACTCCGTTGTACAAATTTATTTTATTTCTTAATTGTTTCATTTTATTTCTTCTTTTTAAAACTCGAAGACGAGTTTTCTTTTTGGAGGGGTAGAATGATGTAAGTAGAAAGGGGTTAAATTGGGTAATTGGATAAAAGTATAGGTTAATTCCCTTTTTACCCCCCACTTGTATTAAAACTCTATAAATAGGAGTCTTATCCCATGTATGGACAATTTCTCTTCAAGAATTACTCCAAGATTCTAGTCTACATCACTTCTGCTTCAATCTATGGCTTTTCAAGTCCCTTATTTTCCCTCTTATTTCATACCCCTAAATCTCCCTTCAAAACTCATCAAACAATGTCCCCAAATATAGAAAAGACCGATAAAGGAATATCATCTTCAATGATTGGAGAACCTTCTTAATGACCACAATAGATTGACCAAATGGAATTACAAGAACCATCAACAGATTCTCCTTTTTTCTTCCCATTGGCTGTTCTCAAAATTATGACCCAAATTCTCAACATATTTCTCTTTATGTGTATAGAAGTCCAATGTATCAACCCACCCAAATTACGTACAACCTTCTCAAAACATTCAAGTCCTAAAGAATGGTTCCATTATTATTTTTTTCTTCTTGCTATAGTCTATACACCTTGATGATTGAAGAGGATAATTTTAGAGATTAGAAAATGGAAGAATATGATTAAGAAGGTATTATAGAAGAAAGGAAAAACAATGGTCAAGTGCTAGGCCTTTAATTGTAGCGAAGGAGAGAGAGGACGCAGAAGAAGAAGGTGATAATGTGTGGATAAACAATTTCTGTCCATACACTAATGGTAAGGACATTTTTTAACCCTTTTTTTAATGTTAAGAATATCAATGTAACTTTTAATAGTTCAAAAGTATTGCTTAAACAAGATAAATGGTTTTCATCCATATACTAACAAGAAAGAGATTTTTTAACTCTTTTTCAAAGTTTAAGAGTATTATATGTGTTCCACCCAAGAAGTAGAGTTAAACTCAAGGAGTTGGAGTAGGAAAGAATAGAGTTTAACTCAACTCCTTGTTTGCCCAAAGAGTTCATGAGCCCCACAACTAAAAAATATTAGTTTCATCCCTTATTAACTCCTTACAATAACTTCACAACTCCATTTCTTGTCTCAAACGCCCCCTTAAGAAATGAAGTGCAAAGTTCGACCTTTATTATTAGGAGCACTATTAGAGTATTATTATCTTCTTTTAGAACAAGTTTTTGGTGATATTTAAAAAATTACACTGAAACAAGAACATCGTCGATCTTCATGGGAAACAATATCACCCCTTTACAACATCAAACAATTGCAAGCTTAGAAGAAAAGTATAAACATGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAACAAAAACCTAGTTTACAAATATAGCTTGAAGTTGAGCAGCATAAAAATCCCCATTAGAGAGCTGTATTAGAAAAGGAGGTTGACATGCTAATGCATATGTAAAGAAACTTACCTATACTGAAATATGAAAATCGAAAGTATTGTTTTAATTCAACGAGTGAACCAATGCCAAACTTACCTAACTTAAAGCGGGAACAGAACTTTGTGAATAGCTTGAACACATAGATTAGAACAGTGAAGTCACTGAAAAAGATGCCTCAAACCATATGGCCATGTCATTTTGAAGCATAAAGAGCAGTTTTTTAAATTCACTAAGTTTGTTGTGGATAATGGGAAAGGGGTCAAATTTTGTGTGGATAGTTGGTGTGATTCTCAACCCCTTGCACAGAAATTTCCTGATATCTTTGCCATCTCTATCAAAAAGGATGTTGTGATTGTGGATTGTTGGTGTGACTCCAGCCAAACCTGGGATTTGGGCCTTAGAAGACGTATTTTTGATAGAGAGATGGGTAATATGGTTGTGATCTGGTAAATCCTAAATTCTTGGGTGGTCTAGGGCAGTCGTGACCGCCTTAAGTGGAAGATAGATGGGTAATATGGTTGCGAAGTTTACAACCAAAGCTACCTTCTTAAACATTGCTAAGAGGACTCCAACTTCAACCTTTGGTGAATCTTGTCTAGAAGCTAAAATTTCCAAAAAAGTTTAAATTCTTCCTCTGGTCCCTTGCTTAAGTTTCAAGGAAACTTAGAAACAGCTCGCTGTCTCCTTCAATATGTTGTCCTTGCTTGAAAGATGAGAAGTCTCTAGACCACATATTTCTGCATTGTGAATTTGCCACTAAGGGCTGGACTCTTCTGTTTAGTATTTTTGGTATGGAGAGTTGTCTCCCAAACAGAGTAGATGATTGGATGCTTGATGGGATTGATAGTTTTGCCTTTGGTAGTAATAGGAAAGTTCTTTGGAGATGTACTAGGCGGTCCCTCTTGTGGTGCCTTTGGAAAGAAAGGGATAGTAGAATTTTTTAAGATAAGCATGCTTCTTTTGATTCTTTTTGGACTTTTGTTCAACATATAACCTCTTGATGGTGCACAAATTACACCAAACTCTTTTGTAATTATAGACTTTTGATGATTTTTAACCATTGGAAGGCTCTTCTTCATTAATGCTTTGGAGAGGGGTCTTCTCAACCCCTTGCTCTTAGGCGGTTTTTTTGGTTTCTGATGGCATATGCTGCAACGCTGTTTCTTATTAAAAAAAAACAAAAAGAAAAGAAAAAGAAGCATATTAAAGACGAGGGCAGGGCAAGAAAAAAATTCCACAAGGGGTGGGAACTATGCGTGCCTACCTTATGAGAAAAGGATAACTGCACAGGGAGGCATCAATAGTATATATAGATTAATTTAAGGAAACTGTTTATGTTAAGAAGTAAGGTTGGAGATAACACTGCTGAAAGTGGAAGATACTGCCAGCTACAGCAAAAACACAAGAAATTAACTGATAAGCGATTTGGTGTTTCATAAAATATGAAGGACAAGCAAGATAAGCATAGGCGAGATAAAAAAATTTGTGAGTGATTTGGTATTTCCAAAACTTCAGCCCAATGGCGGTTATTAGTACTAGCTACTAGGTAACCAAAATGAAATATTCTCCCTGTTCCAATGGACCTTATCTCATAATTAAAAGAGTGAGACAAATGGCCCATCAAATAGAGTTGCTGCTCACCAGCTCCATTCATTCAGTATTCCATTTTTTTTCCTCAGTTGAGGCTGGCTAAGGGATTTAATTTTAAGCCTAGCATGTAACTAGGTCATTTACCTTATGCAGAGATGTGCGTCTGCTTATATCTTTATGCTGCCCTGAAATTGACACCAGTATTTGATACTACCTACTCCCAAGGAGCTGTTTGACTCGATTATGTTTCACCTTTAAAGACAATGTGAAAATTTTGGAAGGGATATCAAGAGGATTAATAGTCCTCAAATTAAGAAACAATAAAGCAAGGTGAAGCTCTGGGAGATGTAAGCAAGGAAGGTGAAGAAAATAGTCACAACCGCTGTACTTTCCCCTGCTCCAATCTCTGTGTTCAAGCCATTCACAGTTTCATTCCTGCTTTAAGTAGGTAAGTTTGGCAATAGTTCACTAGTTGATGAATTCAAAACAATACCTCAAACTGCCAAATCTTGCACGCTCCCTTCTTGTCAAAATGCTGTTCTTGTGTAGACCAAAACCTCATAATTAAGGCAAGCCAGAATTCTTCCCAAGTTTGGAAAAGTTTTCTTCTCTTCCCATCAGAAGCATGCTCATGCTTTCCTCCTCTTCATACAGGATATCCAAAGGGAAAAAATATATATTTAACTTTGGTATATAGTACATTGGCCATTCTACAATTAACTCTTCCACAAATTAGTGTGCAGAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGGAGCACAAATTAAAGAATGATGCATAACAAAATAGTGTTATTTTCTCCATCTCTACTAGAACCTTTGCAAAATCACACAATGGATATACCGTGGTGGTTTGTAAATGAGGAAGGGATGGGAACTAGAAACCACCCACAACTTTGTACGGAACGTATGTATCCAAGGACTTCCTCAAATATATTTAAACAGCCTGTCAACTTGAAGAGGAGAACTAACTGCGTGATTCTCAAGTTTTAAATTGACTCAAGGCTGCAACTTTCTGGAATGTGTGGACTCCAACGGAATTCCAACCAGAGGCTCAAATTATAAACATTCTACAACTGCTTATCCTCAAATGTGATTGAATTAACATAATTCAATAGACATACAATTCAATAGTAATAAAATACTTTTCCATAGTAATCACAATTGCTATAGGAAATTGAAATTAGTTGGCATATGCAGTGGTGTCTGATTGCTAAGAATTTTTTTAACATGTAATTTCCAGAAGTATATCTAAGTATAGATAGAAACCTCACCTGAATTCCAAATATGTGGAGTGATTCCAATGAACTGCTTACTCTGAGCACTTGTTCGGACGGTAACAAGATTTGTATGAGATTATGCTTCTGCTTTTGCACATTGCTCTGATTTTAGATGAACAAGAAACAAAATCTTGAAACTAGATACCAGTGAGGAATTCAAAAGTTACAATGACTATTCTTTTTACTTGCAGATTGAGGCAATGATAGAAAACGACTGTTGGACATACAACATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATCAGTGA

mRNA sequence

TTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGAAAGTCTAATTGATAATGGTAGTGGTACAAAGGTGAGTGAGGATTTACAATCTCTAGTTAAGGTTGAAGAACCAAATTTCAAGAAGCTTGATGTAACTCAGATGATGCAATTGGAGAATCAACTTGAAGGCACGCTTGACAAAATCAAATCTCAAAGAATCTCATCATTCCTTTTTGGTGTTGTCCTACTCTGTGGTCCTCCAGGAGCTCTTTTGATTGAGGCAATGATAGAAAACGACTGTTGGACATACAACATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATCAGTGA

Coding sequence (CDS)

TTATTGAATATTATTATGCGCTACCAACGCCACCTTCAAGGGAGAAGTGAAAGTCCAATTGACAATGACCTTCAAGAGAGAAGTGAAAGTCTAATTGATAATGGTAGTGGTACAAAGGTGAGTGAGGATTTACAATCTCTAGTTAAGGTTGAAGAACCAAATTTCAAGAAGCTTGATGTAACTCAGATGATGCAATTGGAGAATCAACTTGAAGGCACGCTTGACAAAATCAAATCTCAAAGAATCTCATCATTCCTTTTTGGTGTTGTCCTACTCTGTGGTCCTCCAGGAGCTCTTTTGATTGAGGCAATGATAGAAAACGACTGTTGGACATACAACATGGATATGGCTATGGACATGTTCAACAGCCCGTCATTTAATCAGTGA

Protein sequence

LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSEDLQSLVKVEEPNFKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIEAMIENDCWTYNMDMAMDMFNSPSFNQ
Homology
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BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match: A0A1S3CCC5 (MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.6e-30
Identity = 87/146 (59.59%), Postives = 97/146 (66.44%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED----------LQSLVK- 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++          L SL K 
Sbjct: 63  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQ 122

Query: 61  -------VEEPNFKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIE 120
                  VEEPNFKKLD+TQM+QLENQLEGTLDKIKSQR                   IE
Sbjct: 123 LQTIQSQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR-------------------IE 182

Query: 121 AMIEN-DCWTYNMDMAMDMFNSPSFN 128
           AMIEN DCWTY+M++AM M NSP FN
Sbjct: 183 AMIENDDCWTYDMEIAMGMINSPPFN 189

[Close]
BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match: A0A0A0KFD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 83/133 (62.41%), Postives = 90/133 (67.67%), Query Frame = 0 

Query: 6   MRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED--LQSLVK--------VEEPNF 65
           MRYQ HLQGR+ESPIDNDLQ  SESLIDN +   VS++  L SL K        VEEPNF
Sbjct: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF 60

Query: 66  KKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIEAMIEN-DCWTYNM 125
           KKLD+TQM+QLENQLE TLDKIKSQR                   IEAMIEN DCWTY+M
Sbjct: 61  KKLDITQMVQLENQLESTLDKIKSQR-------------------IEAMIENDDCWTYDM 114

Query: 126 DMAMDMFNSPSFN 128
           DMAM M NSP FN
Sbjct: 121 DMAMGMINSPPFN 114

[Close]
BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match: A0A5D3DM40 (MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002370 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.6e-22
Identity = 62/86 (72.09%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSEDL-----QSLVKVEEPNF 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++         + VEEPNF
Sbjct: 27  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVEEPNF 86

Query: 61  KKLDVTQMMQLENQLEGTLDKIKSQR 82
           KKLD+TQM+QLENQLEGTLDKIKSQR
Sbjct: 87  KKLDITQMVQLENQLEGTLDKIKSQR 112

[Close]
BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match: A0A5A7T9V4 (MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00860 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.3e-20
Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED----------LQSLVK- 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++          L SL K 
Sbjct: 27  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQ 86

Query: 61  -------------VEEPNFKKLDVTQMMQLENQLEGTLDKIKSQR 82
                        VEEPNFKKLD+TQM+QLENQLEGTLDKIKSQR
Sbjct: 87  LQTIQRHLYLNYQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR 131

[Close]
BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match: A0A6J1DPA0 (MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022564 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.1e-14
Identity = 59/117 (50.43%), Postives = 71/117 (60.68%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGR--SESPIDNDLQERSESLIDNG----SGTKVSEDLQSLVKVEEPN 60
           LLNII RYQ HL+G+  S+SPID D     +    N     S  K+ + +QS  +VEEP+
Sbjct: 102 LLNIIERYQSHLKGKSQSQSPIDIDTNASDQDHQSNQTILVSLGKLLQTIQS--QVEEPD 161

Query: 61  FKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIEAMIENDCWT 112
           FKKL+VT+MMQLENQLE TLDKIK QR                   IEAM+ENDCWT
Sbjct: 162 FKKLNVTEMMQLENQLEATLDKIKIQR-------------------IEAMMENDCWT 197

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BLAST of Lsi09G017250.1 vs. NCBI nr
Match: XP_011656809.1 (MADS-box transcription factor 8 [Cucumis sativus] >KAE8646765.1 hypothetical protein Csa_005710 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 8.6e-31
Identity = 88/138 (63.77%), Postives = 95/138 (68.84%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED--LQSLVK--------V 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ  SESLIDN +   VS++  L SL K        V
Sbjct: 63  LLNIIMRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQV 122

Query: 61  EEPNFKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIEAMIEN-DC 120
           EEPNFKKLD+TQM+QLENQLE TLDKIKSQR                   IEAMIEN DC
Sbjct: 123 EEPNFKKLDITQMVQLENQLESTLDKIKSQR-------------------IEAMIENDDC 181

Query: 121 WTYNMDMAMDMFNSPSFN 128
           WTY+MDMAM M NSP FN
Sbjct: 183 WTYDMDMAMGMINSPPFN 181

[Close]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match: XP_008459847.1 (PREDICTED: MADS-box transcription factor 8-like [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 9.5e-30
Identity = 87/146 (59.59%), Postives = 97/146 (66.44%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED----------LQSLVK- 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++          L SL K 
Sbjct: 63  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQ 122

Query: 61  -------VEEPNFKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIE 120
                  VEEPNFKKLD+TQM+QLENQLEGTLDKIKSQR                   IE
Sbjct: 123 LQTIQSQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR-------------------IE 182

Query: 121 AMIEN-DCWTYNMDMAMDMFNSPSFN 128
           AMIEN DCWTY+M++AM M NSP FN
Sbjct: 183 AMIENDDCWTYDMEIAMGMINSPPFN 189

[Close]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match: XP_038907043.1 (uncharacterized protein LOC120092871 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 2.6e-27
Identity = 83/144 (57.64%), Postives = 89/144 (61.81%), Query Frame = 0 

Query: 6   MRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSEDLQSLVK---------------- 65
           MRYQ HLQGR+ESPI N LQ  SESLIDN    KV+EDLQ LVK                
Sbjct: 1   MRYQSHLQGRNESPIHNALQGTSESLIDN-DAKKVNEDLQYLVKDHESDETFLVSLGKLL 60

Query: 66  ------VEEPNFKKLDVTQMMQLENQLEGTLDKIKSQRISSFLFGVVLLCGPPGALLIEA 125
                 VEEPNFKKLDV+QMMQLENQLEGTLDKIKSQR                   IEA
Sbjct: 61  KTIHSQVEEPNFKKLDVSQMMQLENQLEGTLDKIKSQR-------------------IEA 120

Query: 126 MIENDCWTYNMDMAMDMFNSPSFN 128
           M+E+D WTYNMDMAM + NSP FN
Sbjct: 121 MLESDGWTYNMDMAMGVLNSPPFN 124

[Close]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match: TYK24685.1 (MADS-box transcription factor 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 9.5e-22
Identity = 62/86 (72.09%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSEDL-----QSLVKVEEPNF 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++         + VEEPNF
Sbjct: 27  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVEEPNF 86

Query: 61  KKLDVTQMMQLENQLEGTLDKIKSQR 82
           KKLD+TQM+QLENQLEGTLDKIKSQR
Sbjct: 87  KKLDITQMVQLENQLEGTLDKIKSQR 112

[Close]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match: KAA0039813.1 (MADS-box transcription factor 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 6.8e-20
Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 0 

Query: 1   LLNIIMRYQRHLQGRSESPIDNDLQERSESLIDNGSGTKVSED----------LQSLVK- 60
           LLNIIMRYQ HLQGR+ESPIDNDLQ RSESLID+ +   VS++          L SL K 
Sbjct: 27  LLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQ 86

Query: 61  -------------VEEPNFKKLDVTQMMQLENQLEGTLDKIKSQR 82
                        VEEPNFKKLD+TQM+QLENQLEGTLDKIKSQR
Sbjct: 87  LQTIQRHLYLNYQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR 131

The following BLAST results are available for this feature:
BLAST of Lsi09G017250.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G017250.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CCC54.6e-3059.59MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=... [more]
A0A0A0KFD81.5e-2862.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1[more]
A0A5D3DM404.6e-2272.09MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7T9V43.3e-2062.86MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1DPA06.1e-1450.43MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 G... [more]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656809.18.6e-3163.77MADS-box transcription factor 8 [Cucumis sativus] >KAE8646765.1 hypothetical pro... [more]
XP_008459847.19.5e-3059.59PREDICTED: MADS-box transcription factor 8-like [Cucumis melo][more]
XP_038907043.12.6e-2757.64uncharacterized protein LOC120092871 [Benincasa hispida][more]
TYK24685.19.5e-2272.09MADS-box transcription factor 8-like [Cucumis melo var. makuwa][more]
KAA0039813.16.8e-2062.86MADS-box transcription factor 8-like [Cucumis melo var. makuwa][more]
BLAST of Lsi09G017250.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi09G017250Lsi09G017250gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi09G017250.1.exon.4Lsi09G017250.1.exon.4exon
Lsi09G017250.1.exon.3Lsi09G017250.1.exon.3exon
Lsi09G017250.1.exon.2Lsi09G017250.1.exon.2exon
Lsi09G017250.1.exon.1Lsi09G017250.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi09G017250.1.CDS.4Lsi09G017250.1.CDS.4CDS
Lsi09G017250.1.CDS.3Lsi09G017250.1.CDS.3CDS
Lsi09G017250.1.CDS.2Lsi09G017250.1.CDS.2CDS
Lsi09G017250.1.CDS.1Lsi09G017250.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi09G017250.1Lsi09G017250.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding