Lsi08G004930.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G004930.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr08: 12808173 .. 12810543 (-)
Sequence length315
RNA-Seq ExpressionLsi08G004930.1
SyntenyLsi08G004930.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACACGTGTCTCCAAACAACAACCTAAGAGTTTGACAACGTTGCGATGGTTGATTTGGGACAAAATGATGACTTCGTTAATGAATTGGTTAGTTTGAGATTGGTCTACCAATTTTGATTTCTTGATTGCGATTATAGAACCATTGGTTAAGACTCCTTTGTAAACGGTACCGTACCCACCTTTGCCAACCACCACGCTTTCATCGAAGTTGTTTGTTGATTTCTCTAACTCTTCACGAGTGAAAATTGTAAGCATGTCAGTGGATGATTGCCATTGAGAAAGATGTTGTTGAAGAACCAAGCCTCCATTTTTCTTAAAAAACTTCTCTTTTTGTTGGATTAACCTCCACTTTTTGTAAGCCAAGTATGACCATATACTGCCAATCCCTAAAACTAAAAGACCCACAGCAATTCCTGCAATTTATTTCAACAATATATACAAAATAAGAAAAATTGATTTTTTTTTTCTATGTATTAGAATAGACTAAATGTGAGGCTATACCTAATCATTGTTCATTTTAATTGTTCAATTTTTTTTAACAATATACTAGAGGAAAGTGGGATAAGAGGGTGCACCACGGACATCCTAACTAGGTTGTCACCTCCTTAACATCCTCATCATACCCCAATGTCAATAGTGTTCAATTTTAATATGTGTACCTTCAATCAATCTTAATTTTAATCACGTGATTGAAGTTAAATTTGAACAAATTCCAAAGTTTAGAGACTAAGACGGTATTCTAACATATTTAAAAAATACTTTAATGCTTCTAGAATTGCAATATTACCTTTAACCTTTCATAAATATTTAAAAATGTTAGTGGTCATTAGATCTTATTTATTTATTTTTATAGAATTATAAACTTGAAATGAGTGTGACAATAATTCAGAATAGTGTGATAGAGTCCTTTCTAGAAGAATCATCGCATAATTCGTCACAATATTCAAAGTTCTAATTTTTGACTAATATTCTTAAGAACTTATATGGTAGTTTTGAAATGTTTATGAAAAACCAAAAATAATAGTGTACCTTTCAAATGAATAAATGTATTTTTGAAAAAAATAACAAAGTTCTAATTTTTTTTCGTAATCAAATATAGGTAATACTTAGGTAATATCTAAGGATGCATCCATCTTTATGCATCCTCTTCTCATCACTCACGCAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAGAGAGAAATAAGAAAAATTTGTCATATGACAAATCATGATTGGACAATTTGATAGGATATACAAAGATAAGTGTTGCTCGAGATGTATCTAAGCATGTTTCTTCAAATATAGAAACTCACCGATGATTAATAGGATGAAAAACGTGGAGTTCTGAGTGCAACCTTCACCTCCACGTATGCCATCTCCTTTAAAGTTCTTGGGACAATTGCAGGTATAGTTTCCTGGTTTGTTAACACACTGATCTTTGAATATACATTCATGACTTCCATCCTGACATTCATCTATGTCTGAAAATGTACCCAAATTATTTATAGGTTGTTTTCAAATATAAAAAAAATAGAAAAACTATTTATAAATATAGAAAAAATTTACTATTTATCAGCGATAGACTACGATAGAATTCTATCGTTTGCGTGATAGTGATAGACAGTAAAAATTTTCTATATTTGTAAATAGTTTACTATTTTTTTTTATGTTTATAGTAATTTTCCTTTTTATAATAATAAACTACCGAATTAATATCAATCAATCTATATAGGAATTTTATACCTTGACAACCTTGAGGGAGATAAGGATTTCCACGGAAACCATCCAAGCACTTACAATAATATTCAGAGTCATCAAGGGATGAGCTACTAATCTTTTTGCTGTTTGGTCCACATAGGCAATTGTGTGTGTCATTGTTAGGCATTTGGCAAGTATCATTTTTTATGCCCCAGTTAAGCACCACTGGAACTTCATCTGTGAAGTTCCGACAAAAGCATACCCACAGGGATTCAAGCTGTGTACCTCAGTATGATTTTCGAAACTTTTAACCTCCAACACTATTTCTTGTAGGTCTTCAGGAATCTCCAACTGACAGCACCCACGCCCAGAGCAGGACCCATCTTTTATAGTTCTACTACTGTTTCCACACAACGCCATGCACCCACTTAAGTAAGGTTCCCCCTGGAGTTGGCCTTCAAGATAACCGTGAGTATCGCAACCGACGACAGTAAACTTGTTCTTGGTGTTGGAAATTGTGAACATGTCCACTGTAAGATTGAGTTTGGCTCTGCTGATGTCGGGACGACCGTCTTTTTCGTAGCAATCTCGGGCTACCTTGTTCAAGATGTGGAGCTGGCTGGAGTGGATTGA

mRNA sequence

ATGGAACACTTAAGCACCACTGGAACTTCATCTGTGAAGTTCCGACAAAAGCATACCCACAGGGATTCAAGCTGTGTCTTCAGGAATCTCCAACTGACAGCACCCACGCCCAGAGCAGGACCCATCTTTTATAGTTCTACTACTATAACCGTGAGTATCGCAACCGACGACAGTAAACTTGTTCTTGGTGTTGGAAATTGTGAACATGTCCACTGTAAGATTGAGTTTGGCTCTGCTGATGTCGGGACGACCGTCTTTTTCGTAGCAATCTCGGGCTACCTTGTTCAAGATGTGGAGCTGGCTGGAGTGGATTGA

Coding sequence (CDS)

ATGGAACACTTAAGCACCACTGGAACTTCATCTGTGAAGTTCCGACAAAAGCATACCCACAGGGATTCAAGCTGTGTCTTCAGGAATCTCCAACTGACAGCACCCACGCCCAGAGCAGGACCCATCTTTTATAGTTCTACTACTATAACCGTGAGTATCGCAACCGACGACAGTAAACTTGTTCTTGGTGTTGGAAATTGTGAACATGTCCACTGTAAGATTGAGTTTGGCTCTGCTGATGTCGGGACGACCGTCTTTTTCGTAGCAATCTCGGGCTACCTTGTTCAAGATGTGGAGCTGGCTGGAGTGGATTGA

Protein sequence

MEHLSTTGTSSVKFRQKHTHRDSSCVFRNLQLTAPTPRAGPIFYSSTTITVSIATDDSKLVLGVGNCEHVHCKIEFGSADVGTTVFFVAISGYLVQDVELAGVD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi08G004930Lsi08G004930gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi08G004930.1.exon.4Lsi08G004930.1.exon.4exon
Lsi08G004930.1.exon.3Lsi08G004930.1.exon.3exon
Lsi08G004930.1.exon.2Lsi08G004930.1.exon.2exon
Lsi08G004930.1.exon.1Lsi08G004930.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi08G004930.1.CDS.4Lsi08G004930.1.CDS.4CDS
Lsi08G004930.1.CDS.3Lsi08G004930.1.CDS.3CDS
Lsi08G004930.1.CDS.2Lsi08G004930.1.CDS.2CDS
Lsi08G004930.1.CDS.1Lsi08G004930.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi08G004930.1Lsi08G004930.1-proteinpolypeptide