Lsi08G000870.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G000870.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr08: 1783120 .. 1784910 (+)
Sequence length261
RNA-Seq ExpressionLsi08G000870.1
SyntenyLsi08G000870.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTTTGATATTACAACATTTTAGGTTGACACTCACGATACCACCCATTCAATTGCATGCCTTTAACTAATATTATAGAATGATGGTTTAATCCTACAAAATTTAGTATCAATCATCTATACAATTCATGTGTATTTTGACTAATATAATGTAACGATTATCTGATTTGACAACAGTTAATCTTAACATTCTCAAATACTTGATATCCCTTTTGAGTTCACGACTTACTCTTTGACCACACTGTCTCCTCAAAGAATGATGAGTAAGAGATGCAAATAAGTTGGGGTAATGAACTTATAGATATGATGATCAAGTAAAATTCATGATTATGAGCTCATTCCACAAGAAAAATGAGGTCATTCCACATTGGCTAGATTGAAATAAGACTAAGTTCTAAACAAAGATTAGATTGCATAAAGTCTGTGGTATAGCAATAAAGACACATTACCTTGGCTAATCGTGTAACGTATGCAGCAGCCAATGCTGTTGCCAACAATCCCAGTCCTAAAGTCCATAGCTGACCATTTCCCCCTCCTAGCAAACCAACTTCAGACTCTTCTTGCTGAAACACCCCAAGTAGAATTAACAGCGAAAAAGAAACCAGACAATAAGATTGAAACTCGGAAATTCGGAAACAATTGGGTAGAGAGACAGCAAACCCAATTAAGAATCCAGATCATAGATGCAATCTTGTGTTTGTCTTATCTCTTAAAAAAGTGTTTTTAAAATGCTTTTTTACCAGAACACTTTAGGCTTGGTTTAGAATTATTGTAGCTTTTAAAATAATAACGATAGCTGCATTTTAAAAAATTTGGCTATAAAATGCAGTAAATAAGTGTTCGGTAAATTTCATTGTTTCAAATTTAAATGTGAAAATGTATTAAAGAATAGGAATCATAGTTAGAAGAGGCATGAGATTTTTGAAACTCAACCTCAAAAGCTACTCTACATAGATTTTAGAAACTAATTGAAATGAAAACGTGATTTGCTTTAAATTATCTTATAATCAATTTTACCAAACACTAAAACGATTAAAATTTCCACACAATCACTTTAAACCCCTGCGAAATCAAAATCCCAAATGCACTTGAAGTGCATTTTATCTATTTTTATAATTTCTCAAACTACTTGTACTCATCAAAAAATTTTAAAAAGTACTTTTAATTGGTCAAATGTACCTTCTACTAACTGAAATATTAAGGACAAATTGTAAAAACCACCCTAGAAGTACGGCGTGCAATTACATCTTCAAAATTTCAATTGTAAAAATTGGGCTCTCAAATTTCTACGATTGTTAAAATTGGACCCCCAATAATTGTAAAAAATTGAACTCTTAAACTTATACAATTGTTATAATTTCTACAATTATGCAAGTATGAGGGTCCAAGTTTAACACATGTATAAGTTTGAGTGCTTAATTTTTACAATTGAAAGTTTGAGAGTATAATTACAACTACCACTACACTTTAGGAGTAGTTTTCACAATTTGCCCAAATTTTAATTACAGAAGTACTCATTCCTAAACACGTTAGGAGCCATGTCAAATACAAATTTACAAGGTAAGATGTTATTATGAAAAATATAAGCACGTCTCTAAGCAGTGAGGGCAACAGGCTGTAAACTTACAATAATTGCACGTCCAAAGGCGCCCGCACTCACATAAGCCCATGTTCCTGGAAGCATCCCCAGCCAGCTGCATTGAAAATAATAAATCTATTTATGTTTTCAAAAACTTTTTAAGTTCATACAGCTCAAAGCAGTCTGTATGCATCGACACAACTGATTGA

mRNA sequence

ATGACTCAGCCAATGCTGTTGCCAACAATCCCAGTCCTAAAGTCCATAGCTGACCATTTCCCCCTCCTAGCAAACCAACTTCAGACTCTTCTTGCTGAAACACCCCAAGTAGAATTAACAGCGAAAAAGAAACCAGACAATAAGATTGAAACTCGGAAATTCGGAAACAATTGGGTAGAGAGACAGCAAACCCAATTAAGAATCCAGATCATAGATGCAATCTTCTCAAAGCAGTCTGTATGCATCGACACAACTGATTGA

Coding sequence (CDS)

ATGACTCAGCCAATGCTGTTGCCAACAATCCCAGTCCTAAAGTCCATAGCTGACCATTTCCCCCTCCTAGCAAACCAACTTCAGACTCTTCTTGCTGAAACACCCCAAGTAGAATTAACAGCGAAAAAGAAACCAGACAATAAGATTGAAACTCGGAAATTCGGAAACAATTGGGTAGAGAGACAGCAAACCCAATTAAGAATCCAGATCATAGATGCAATCTTCTCAAAGCAGTCTGTATGCATCGACACAACTGATTGA

Protein sequence

MTQPMLLPTIPVLKSIADHFPLLANQLQTLLAETPQVELTAKKKPDNKIETRKFGNNWVERQQTQLRIQIIDAIFSKQSVCIDTTD
Homology
The following BLAST results are available for this feature:
BLAST of Lsi08G000870.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi08G000870.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi08G000870.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi08G000870.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi08G000870Lsi08G000870gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi08G000870.1.exon.1Lsi08G000870.1.exon.1exon
Lsi08G000870.1.exon.2Lsi08G000870.1.exon.2exon
Lsi08G000870.1.exon.3Lsi08G000870.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi08G000870.1.CDS.1Lsi08G000870.1.CDS.1CDS
Lsi08G000870.1.CDS.2Lsi08G000870.1.CDS.2CDS
Lsi08G000870.1.CDS.3Lsi08G000870.1.CDS.3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi08G000870.1Lsi08G000870.1-proteinpolypeptide