Lsi06G011080.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGGATGTCCATGTCGTCTGCGTGAAGCCACCACCCGACCTCTGCTGGAGAAAAAATTGCATAGGCGGATTGATAGTTGAGAGGAGGAAGAGGAAGAAGAAGATGTCTAGGTTTCTTTTCTTTTCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTAATTATTATTTATCTTCCACGAAATCTTATCTATTTCTTCAAATTCAAAAACCATAAAAGAAAATATTGGAGATAATGGAATGGACTGCAAGCACTCCATATGGGACTTGAGTTGTGTGAATATATTTGAAGGGCACCAACATAACTTTGAAAAGAACCTACTAAAATGTAGCTGAATAAGAATAAAAAACTCAAAAAGTAAAAACCAAAATTAAAAAGTAACAAGATAAATAAAAAAAATAAAAAAGGAAAAAGGAAAAAGTAAGATAATATGCCATATTTGAAACAAAAAGATTGGAAGATAATATGAGATTTGAAAAATAGATCTTGATTTTAAGATTCAAAAAATTGGGCACAACATTTTAAATTTATGACTTGAAAGCTTTAATTTAGTAAAGTTAAAGATATTGCTAAGGGAATTTTATGATTAACAGAAAAAGATCTCACGTGTGTGTTGTTATAATTTTTATGATTTTCGTTTTTTTGCTAAATTTCTAAATGAAACCTTAATTGATGTTATAGACTCCTATATCCCATGTACATATGGAGTTGGCCCAGTACTTACCCAGTGGGTTAGCTTATAGTTGGGGCCCAAACATATTTGGGCTTTGGATGGATTCGTTGAATAATGGGCTACTTCCTTACGTTGATTCCGATCAAACTACAGCTACATGGTATGATCTTAACATGCAAAAGTAGAAGATTTACAAAAAGCGTAATTGTAATGAGTTAGTAATTTTATGGATAATAACTAAGTGTATAGCAATATTTTTAAAAAATTACAAATATAGCAAAATTTATTAGTAATAGACTTCTATCACTGATAGACTTTTATGATTTATCAATGATAGGCTACTTAGACCATAAAAAATCTATCAGCTATAGAAGTCTATCACTGATAGACTTTGCTATATTCGTAATTTTACCCTTTTGTTTCTCTTTTTTTTCTTTTCTTTTTTCTCTTTTTTTTTTCTCTTTTTTCCCTCCCCTTTTACATATAGCATTTCAATTTTACCCTTTGTTGTGTTCATTTTTATTTTCTCCTTCTCACAATAGGTGCTTTTAATAAGATTCCTTATATATCCATACTCTAACCTGCATTTACAATGACCAAAATTTATGGGATATATATTCTCATACGTTGAAAGTTTGATAGTAGTTGACGGCAGGGTTTGGCAATTATTTTACTATAATTAGATAGTGAATAATTGTGTTTAGTGTTTTGATTTTTTTTTTTCTTTCTTTCTTTCTGTGATTCTATTGGAATCACGTTTTGAAAACCAAAAGGTAAATTCTAAACAAGTATTTCACACAATTAAATTATATCTCCTAGCTAGCTTTACAAATTGATTGGCTGAATGCAACATTTTTTAAATTATAAAAATTAAGACCAGCTTAAAATTTTCCTCACTATTTCACCTAATACCTTTCAATTAATTTATAGTCAACCAAATTTAGGAAGAACCCTATTACATAAGAATAGGTAACAGTTCAACTCAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAGTATATATATATTTATAAGTTATAACAGTTATTTTTGTTGTTTGCTAAATCAAAGATGATTATGATCGTCCACCCACTAAATATTTGACCAATCACCGTTGGCGAATTTTATATATATAGTGGATGAAAAGGTTATTTTTATGAGCACATACACATTAATTTGACCATCTGCCAGCTAATAAGTTTATATATATATATATATATAGGTTTCCCTGATCAAATTTTAGTTTTATGTGAATAAATTTTTAAACTTTTAATTTTATGTTTAAGATGTCTTTAGAAATACTATAAACAGAAAAAATATTAAACTATTTACAAATATAGAAAAATTTCACTATCTACCAATGATAGACTGCAATAGACTTCTATTGCTTGAGCGATAAAAGTCTATCCCGGTCTATTGCTCAAACAATAGAATTCTATAACTGATAGACAATGAAATTTTTCTATATTTGTAAATAGTTTTGCTCATTTTTCTATATTTGAAAATAACTCTATTATAAATCTATTAGATATAAATTAAATCAAAATTTTGTGTCTAATAAAATCTTAAATTTTTTAATTTTCTATAAAATAGGTTGGTGAAATTTAAAAGAAATGTCCGATAAACCACACAAATTTGAAAGATTAAAAATCTAGTAAACATTTATAAATTGAATATCTATTAAAGATGCATAGAATTATTTGACACAAAATTAAAAGGAGTATGGATAATGATTTGAGTGAAAAAAGAAAAATAAAATTGGTGTTGTTAAAGGCGTAGAGTATAATGGTAAGCACCGAGGCAGCATATCCGACGATAGAGGCCGGCCAAGGTCGGCTTTGAATACAATTACAATTGGCAAAGTGTAAAACATGGGTTCGTCGGTTTAAAAGAGGAAACCTTTTTTTTGTACCAATCAAGACGATGCTGACCTGACGCAAAAACCAAAGCCATGGGATCGTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCAAGGGTAATTAATTTCGTGCATTATTTCTTTTCTTAATTTTATGTTTTTGTTATGAATTTAATTAGAAAAATTTTGTTGTGGGAAAATTAAGGTTGGGTGGAGGCAACAGTTCATGGAGGATGTATACTTACAAGGAGTTGCATGCGGCCACCAACGGTTTCCATGACGATAACAAGCTGGGAGAAGGAGGATTTGGAAGTGTTTATTGGGGAAAGACCACCGATGGCCTTCAGGTACTTAAATCATATTCATCTAATATTTGTTTCTTGGATGTGGGGGTTTAGATCACCTTAGTCTGGTCTCGATTGTTCTCGAACTAACCCGTATTAGAGATCCTTACACCGGTGTGATGTTGAGCTTAATGCATTCCGATGTTTGAGTTGGTAAAATGAGTGTTTGGTTCTACTAAGCATAAAAGAAATTAGGTCGGGGCTCTCCGTTGAAGATTACTTACTCTCCCTTTATCGGTGTTGGGAAGGAGAAGTCGGCAGCGGAGATGAATTAGGTGTGGTTGATGATTTTATATTTTTCATATATTGGAAAGATTTGTTCATCTACCTCTATATTGTCCTCTTGTTGTACTCTCTCATTTATTTCGGGTTTGGTTTGCTTGATTTGGCACTATGAGAATAAAGTAATCTGTTAAAAAAAAAAATATAGGTCATTTCTCTCCTTTCTTGTCACATATAACGCTAGTGGTGTCACGGACGCTTCTAGCACTCAAGTTGCCAATTCGGGTTCAGTTTAAATATTTCTCTATCGGTATATATTTACTGGCTCAACTTGTCGGCTTGATTCCCAAGGCGTTGACATTTCTTTTTTTGGACGTGCACTCCCTTCCCCTATGACTCCTCCCAGTACCCTATGGGCTTGGGCAACACTTAACATCGTATATATATATATTGTATATGTTGATGCCAAAAAATGGATCAACCGTGAATTTGTTTTCTTTGGGAGAGATTCGTCGTTTTTGAGTAACTAGACAATAAGGAAATAATAGGGTATTTTTAGCACAATTTTGAGCATACCTTCGACCAATGGTCTCATTCTTATTTATAGATAGTAAAATGTAACTGACGTCGAGGGTTATAACGCCCTTCTTCAATCCATGTAACAGCTGAGTTAATTGATTGAGCGGTTACGTCATTATTGGTGCATCACTTAAAGGCTTGTCCGTTATGAATATGGACGGTTTCAGCCCCAATTGCCTCTCCTAAGCTTTCTGCTTAGCTTAGGCTCCTCTTGACTTGAGCTCGATTCTCCTAAGCTTGTAGGCTTAGGCTCACCTAAGCTCTCTTAGCTTACCTCACGGGTCCCACTGAGCTCGAGCTCTCTCGCGGGTTCTCTTCTAAGTTGAAGCTCGACTCTCTTAAGCTTTCTTGTAGGCTTAGGCTCACCTGAGCTCTCTTAGCTTACCTTACGGGTCCCACTGAGCTTGAGCTCTCTTGGGGCTCTCCCGAGATGAATGGAGGCTTTTCAGATCACCTCCATCTCACTTGATGGAGGCTTTTCAGCTCACCTCCACCTCACTTCATGGGTCCCACTAAGCTCTTTAAGCTCACTTAGACTCTCCCATGGGTTCTTTGAGGCTCTTTAGCTCACCTCACTTCATGGGTCACACTGAGCTCTTTAAGCTCACTTAGGCTCTTCATGGGTTATCTGAGGCTCTTTAGCTCACCTTACTTCATGGGTCTCACTTAGCTCTTTAAGCTCAATTAGGCTCTCCCATGAGTCGTGGCTAATTTTGCCCATAACAACAGTATATGTGTGATGTAATGCATTGAATCTGTCATCTAGAGTTTCGAATGATTAAATATAAGATTTTGTTGGTGCTTATTATATGATATTTTTCTCTAAGATTAAAATTGTTCTAATGTAACTAAAATATTGTTAGCAAACCATGTAAAATATATGTGTCGTTCTTTACTATTTATGCTTTTTGCTGATCGATTTCGTATAGGATTTGGGAAATTAAAAGTACTTATGGTATACATATATATGTGTGTAGATAGCGGTGAAGAAGTTGAAAGCGATGAATTACAAGGCAGAAATGGAGTTTGCGGTGGAAGTGGAAGTGCTGGCGAGACTGAGGCACAAGAATTTGTTGGGTTTGAGAGGTTATTGTGTGGGGACTGATCAAAGGCTTATTGTTTATGATTACATGCCAAATCTCAGCTTGCTCTCTCATCTTCATGGCCACTTTGCTTCTGAAGCTCTCTTGGATTGGAAAAGAAGAATGAAAATTGCTCTTGGCTCTGCTGAAGGCATTTTGTAAGTCCTCAATTACTTTTCTGAATTAACATTCTATATAAAAATTAACTTGTTTTTATTTTTAAAATTTGGTTAAGAATTATATAAAAAAAACCATATAATATATAGAAAATGTGAGAAGATTACATAATTTTCATTTTTCCAAAACTGAAAATAACTAAAGATTAAATTGTTATTCAAATACCATCTACACTTGAATTTATACATTAGTGTTCATATTATGTAGGTATTTGCACCAAGAAGTAAGCCCCCACATAATCCACAGAGACATAAAAGCAAGCAATGTGTTACTAGACTCAGATTTCCATCCATTAGTAGCTGATTTCGGGTTTGCCAAACTAATCCCAGAAGGGGTTAGCCACATGACAACTCGTGTCAAAGGAACCTTAGGTTATCTTGCTCCTGAATATGCCATGTGGGGCAAAGTTTCCGATAGCTGTGACGTTTTCAGCTACGGAATTCTTTTACTCGAACTGATGACCGGAAGGAAGCCAATCGAAAGACTCCCCGGCGGAGCAAAGAGAACCATTTCAGAATGGGTTAATATCACAATAAACAAAGACAGATTCAAAGACTTAGCTGATAAGAAGCTCAAGGGACAGCTGAATTGGAAACAGTTCGAACAAGTAATGCATTTGGCAATCATGTGCGTCCAAACTGAGGCAGAGAAGCGGCCTACTATGAAACAAGTAGTGGAATGTTTGAAAGGATTGATGGCTGATGCTGGAAATTATAACAAAGTACCTGTATTAATGAGTATTCCAAGTGTTAGAGCATATGAAAATAATAATAATAATAATAATGAAGATCATCGTCATCAGCTGGTTAGCAAGGAATTTCATGGTGGAGGAGGAGATGATCAAGAGAGTTTTGATTATGGGGTTTTTAGTGCCATTGAGGAGCAGAGGATTATAAGAGATTATCCTTACAATAATCATAAACAACCGTAA AAGGATGTCCATGTCGTCTGCGTGAAGCCACCACCCGACCTCTGCTGGAGAAAAAATTGCATAGGCGGATTGATAGTTGAGAGGAGGAAGAGGAAGAAGAAGATGTCTAGACGATGCTGACCTGACGCAAAAACCAAAGCCATGGGATCGTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCAAGGGTTGGGTGGAGGCAACAGTTCATGGAGGATGTATACTTACAAGGAGTTGCATGCGGCCACCAACGGTTTCCATGACGATAACAAGCTGGGAGAAGGAGGATTTGGAAGTGTTTATTGGGGAAAGACCACCGATGGCCTTCAGATAGCGGTGAAGAAGTTGAAAGCGATGAATTACAAGGCAGAAATGGAGTTTGCGGTGGAAGTGGAAGTGCTGGCGAGACTGAGGCACAAGAATTTGTTGGGTTTGAGAGGTTATTGTGTGGGGACTGATCAAAGGCTTATTGTTTATGATTACATGCCAAATCTCAGCTTGCTCTCTCATCTTCATGGCCACTTTGCTTCTGAAGCTCTCTTGGATTGGAAAAGAAGAATGAAAATTGCTCTTGGCTCTGCTGAAGGCATTTTGTATTTGCACCAAGAAGTAAGCCCCCACATAATCCACAGAGACATAAAAGCAAGCAATGTGTTACTAGACTCAGATTTCCATCCATTAGTAGCTGATTTCGGGTTTGCCAAACTAATCCCAGAAGGGGTTAGCCACATGACAACTCGTGTCAAAGGAACCTTAGGTTATCTTGCTCCTGAATATGCCATGTGGGGCAAAGTTTCCGATAGCTGTGACGTTTTCAGCTACGGAATTCTTTTACTCGAACTGATGACCGGAAGGAAGCCAATCGAAAGACTCCCCGGCGGAGCAAAGAGAACCATTTCAGAATGGGTTAATATCACAATAAACAAAGACAGATTCAAAGACTTAGCTGATAAGAAGCTCAAGGGACAGCTGAATTGGAAACAGTTCGAACAAGTAATGCATTTGGCAATCATGTGCGTCCAAACTGAGGCAGAGAAGCGGCCTACTATGAAACAAGTAGTGGAATGTTTGAAAGGATTGATGGCTGATGCTGGAAATTATAACAAAGTACCTGTATTAATGAGTATTCCAAGTGTTAGAGCATATGAAAATAATAATAATAATAATAATGAAGATCATCGTCATCAGCTGGTTAGCAAGGAATTTCATGGTGGAGGAGGAGATGATCAAGAGAGTTTTGATTATGGGGTTTTTAGTGCCATTGAGGAGCAGAGGATTATAAGAGATTATCCTTACAATAATCATAAACAACCGTAA ATGGGATCGTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCAAGGGTTGGGTGGAGGCAACAGTTCATGGAGGATGTATACTTACAAGGAGTTGCATGCGGCCACCAACGGTTTCCATGACGATAACAAGCTGGGAGAAGGAGGATTTGGAAGTGTTTATTGGGGAAAGACCACCGATGGCCTTCAGATAGCGGTGAAGAAGTTGAAAGCGATGAATTACAAGGCAGAAATGGAGTTTGCGGTGGAAGTGGAAGTGCTGGCGAGACTGAGGCACAAGAATTTGTTGGGTTTGAGAGGTTATTGTGTGGGGACTGATCAAAGGCTTATTGTTTATGATTACATGCCAAATCTCAGCTTGCTCTCTCATCTTCATGGCCACTTTGCTTCTGAAGCTCTCTTGGATTGGAAAAGAAGAATGAAAATTGCTCTTGGCTCTGCTGAAGGCATTTTGTATTTGCACCAAGAAGTAAGCCCCCACATAATCCACAGAGACATAAAAGCAAGCAATGTGTTACTAGACTCAGATTTCCATCCATTAGTAGCTGATTTCGGGTTTGCCAAACTAATCCCAGAAGGGGTTAGCCACATGACAACTCGTGTCAAAGGAACCTTAGGTTATCTTGCTCCTGAATATGCCATGTGGGGCAAAGTTTCCGATAGCTGTGACGTTTTCAGCTACGGAATTCTTTTACTCGAACTGATGACCGGAAGGAAGCCAATCGAAAGACTCCCCGGCGGAGCAAAGAGAACCATTTCAGAATGGGTTAATATCACAATAAACAAAGACAGATTCAAAGACTTAGCTGATAAGAAGCTCAAGGGACAGCTGAATTGGAAACAGTTCGAACAAGTAATGCATTTGGCAATCATGTGCGTCCAAACTGAGGCAGAGAAGCGGCCTACTATGAAACAAGTAGTGGAATGTTTGAAAGGATTGATGGCTGATGCTGGAAATTATAACAAAGTACCTGTATTAATGAGTATTCCAAGTGTTAGAGCATATGAAAATAATAATAATAATAATAATGAAGATCATCGTCATCAGCTGGTTAGCAAGGAATTTCATGGTGGAGGAGGAGATGATCAAGAGAGTTTTGATTATGGGGTTTTTAGTGCCATTGAGGAGCAGAGGATTATAAGAGATTATCCTTACAATAATCATAAACAACCGTAA MGSSFSCCDSEKVDQGLGGGNSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQIAVKKLKAMNYKAEMEFAVEVEVLARLRHKNLLGLRGYCVGTDQRLIVYDYMPNLSLLSHLHGHFASEALLDWKRRMKIALGSAEGILYLHQEVSPHIIHRDIKASNVLLDSDFHPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSDSCDVFSYGILLLELMTGRKPIERLPGGAKRTISEWVNITINKDRFKDLADKKLKGQLNWKQFEQVMHLAIMCVQTEAEKRPTMKQVVECLKGLMADAGNYNKVPVLMSIPSVRAYENNNNNNNEDHRHQLVSKEFHGGGGDDQESFDYGVFSAIEEQRIIRDYPYNNHKQP Homology
BLAST of Lsi06G011080.1 vs. ExPASy Swiss-Prot
Match: Q9LSC2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.9e-87 Identity = 162/340 (47.65%), Postives = 229/340 (67.35%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy Swiss-Prot
Match: Q9CAL8 (Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana OX=3702 GN=PERK13 PE=1 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 2.6e-73 Identity = 148/350 (42.29%), Postives = 216/350 (61.71%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy Swiss-Prot
Match: Q9C660 (Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana OX=3702 GN=PERK10 PE=1 SV=2) HSP 1 Score: 275.4 bits (703), Expect = 9.9e-73 Identity = 136/300 (45.33%), Postives = 194/300 (64.67%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy Swiss-Prot
Match: Q9SX31 (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 6.4e-72 Identity = 136/303 (44.88%), Postives = 198/303 (65.35%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy Swiss-Prot
Match: Q9LV48 (Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.1e-71 Identity = 131/290 (45.17%), Postives = 197/290 (67.93%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy TrEMBL
Match: A0A1S3BWV2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucumis melo OX=3656 GN=LOC103494300 PE=3 SV=1) HSP 1 Score: 709.9 bits (1831), Expect = 5.8e-201 Identity = 356/398 (89.45%), Postives = 375/398 (94.22%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy TrEMBL
Match: A0A5D3CBW6 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00750 PE=3 SV=1) HSP 1 Score: 698.0 bits (1800), Expect = 2.3e-197 Identity = 355/418 (84.93%), Postives = 375/418 (89.71%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy TrEMBL
Match: A0A5A7VE42 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00060 PE=4 SV=1) HSP 1 Score: 697.6 bits (1799), Expect = 3.0e-197 Identity = 352/398 (88.44%), Postives = 371/398 (93.22%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy TrEMBL
Match: A0A6J1E5G5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita moschata OX=3662 GN=LOC111429664 PE=3 SV=1) HSP 1 Score: 652.5 bits (1682), Expect = 1.1e-183 Identity = 327/390 (83.85%), Postives = 351/390 (90.00%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. ExPASy TrEMBL
Match: A0A6J1JMI5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC111485734 PE=3 SV=1) HSP 1 Score: 647.1 bits (1668), Expect = 4.6e-182 Identity = 320/390 (82.05%), Postives = 349/390 (89.49%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. NCBI nr
Match: XP_038880348.1 (PTI1-like tyrosine-protein kinase At3g15890 [Benincasa hispida]) HSP 1 Score: 757.3 bits (1954), Expect = 6.6e-215 Identity = 373/393 (94.91%), Postives = 382/393 (97.20%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. NCBI nr
Match: XP_004146351.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucumis sativus]) HSP 1 Score: 712.2 bits (1837), Expect = 2.4e-201 Identity = 357/399 (89.47%), Postives = 373/399 (93.48%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. NCBI nr
Match: XP_008453646.1 (PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Cucumis melo]) HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200 Identity = 356/398 (89.45%), Postives = 375/398 (94.22%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. NCBI nr
Match: TYK09477.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 698.0 bits (1800), Expect = 4.7e-197 Identity = 355/418 (84.93%), Postives = 375/418 (89.71%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. NCBI nr
Match: KAA0064001.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 697.6 bits (1799), Expect = 6.2e-197 Identity = 352/398 (88.44%), Postives = 371/398 (93.22%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. TAIR 10
Match: AT1G52540.1 (Protein kinase superfamily protein ) HSP 1 Score: 334.7 bits (857), Expect = 9.8e-92 Identity = 159/288 (55.21%), Postives = 218/288 (75.69%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. TAIR 10
Match: AT3G15890.1 (Protein kinase superfamily protein ) HSP 1 Score: 324.3 bits (830), Expect = 1.3e-88 Identity = 162/340 (47.65%), Postives = 229/340 (67.35%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. TAIR 10
Match: AT1G70460.1 (root hair specific 10 ) HSP 1 Score: 277.3 bits (708), Expect = 1.9e-74 Identity = 148/350 (42.29%), Postives = 216/350 (61.71%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. TAIR 10
Match: AT1G26150.1 (proline-rich extensin-like receptor kinase 10 ) HSP 1 Score: 275.4 bits (703), Expect = 7.1e-74 Identity = 136/300 (45.33%), Postives = 194/300 (64.67%), Query Frame = 0
BLAST of Lsi06G011080.1 vs. TAIR 10
Match: AT1G68690.1 (Protein kinase superfamily protein ) HSP 1 Score: 272.7 bits (696), Expect = 4.6e-73 Identity = 136/303 (44.88%), Postives = 198/303 (65.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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