Lsi06G008960.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G008960.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF538
Location	chr06: 18551430 .. 18552148 (+)
Sequence length	719
RNA-Seq Expression	Lsi06G008960.1
Synteny	Lsi06G008960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCTTTTACGAAAATAATTAAATAAATACCCAATGCCACGACGTCGTTTACCAGGTCAAAGTATTTCATCGCCTCATCAGGAGGATTTCCTTTGTGGAAAAGAAAACAGTTACGTAGCCATCTCGAACGACTAGTCAATGACTGGTAAGAAAGAACCACAAAGAAACAACAAATCTCAGAGTGATTTGTAAAAATCTGAAATCAAACAACATTTGCTTTGTTTCAGAGGACGATCAGAAGTAGAAGAAGCTCACCATGAAATCCATCTTCCTTCTCTTTCTCTTCTCAGCTCTCGTTTCTCTTTCCACCCAATCCATTGACTCCAAAGACCTAAAAATTCCACCATCCTCTGCTCACGCTCGCCTCGCCGATTACGGATTTCCCTTCGGTCTTCTCCCCTCCTCCGTCGCGACCTACTCCATCAACGAGACCTCTGGTGACTTCTCTTTGGACCTTGGTGATTCCTGCAAGTTCACTCTTCCACCAGACAACTATGTCGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGGATCCACAATCTTGACGGGATTCGTGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGATGAGGATTTGGTTTTCGAGGTTGGGTTGATCACCGCTAAGTACCCGTCTAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTGCTTCGTAA

mRNA sequence

ATATCTTTTACGAAAATAATTAAATAAATACCCAATGCCACGACGTCGTTTACCAGGTCAAAGTATTTCATCGCCTCATCAGGAGGATTTCCTTTGTGGAAAAGAAAACAGTTACGTAGCCATCTCGAACGACTAGTCAATGACTGGTAAGAAAGAACCACAAAGAAACAACAAATCTCAGAGTGATTTGTAAAAATCTGAAATCAAACAACATTTGCTTTGTTTCAGAGGACGATCAGAAGTAGAAGAAGCTCACCATGAAATCCATCTTCCTTCTCTTTCTCTTCTCAGCTCTCGTTTCTCTTTCCACCCAATCCATTGACTCCAAAGACCTAAAAATTCCACCATCCTCTGCTCACGCTCGCCTCGCCGATTACGGATTTCCCTTCGGTCTTCTCCCCTCCTCCGTCGCGACCTACTCCATCAACGAGACCTCTGGTGACTTCTCTTTGGACCTTGGTGATTCCTGCAAGTTCACTCTTCCACCAGACAACTATGTCGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGGATCCACAATCTTGACGGGATTCGTGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGATGAGGATTTGGTTTTCGAGGTTGGGTTGATCACCGCTAAGTACCCGTCTAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTGCTTCGTAA

Coding sequence (CDS)

ATGAAATCCATCTTCCTTCTCTTTCTCTTCTCAGCTCTCGTTTCTCTTTCCACCCAATCCATTGACTCCAAAGACCTAAAAATTCCACCATCCTCTGCTCACGCTCGCCTCGCCGATTACGGATTTCCCTTCGGTCTTCTCCCCTCCTCCGTCGCGACCTACTCCATCAACGAGACCTCTGGTGACTTCTCTTTGGACCTTGGTGATTCCTGCAAGTTCACTCTTCCACCAGACAACTATGTCGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGGATCCACAATCTTGACGGGATTCGTGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGATGAGGATTTGGTTTTCGAGGTTGGGTTGATCACCGCTAAGTACCCGTCTAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTGCTTCGTAA

Protein sequence

MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTDEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS

Homology

[Close]

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL
Match: A0A5D3BM00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00370 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 144/153 (94.12%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFLFSAL+ LSTQSIDSK+L IPPSSAHARLADYGFPFGLLPS+V+TY+INETS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL
Match: A0A1S3CJ18 (uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 144/153 (94.12%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFLFSAL+ LSTQSIDSK+L IPPSSAHARLADYGFPFGLLPS+V+TY+INETS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL
Match: A0A0A0LTW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.3e-75
Identity = 143/153 (93.46%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFLFSAL+SLSTQSIDSK+L IPPSSAHARLADYGFPFGLLPS+V++Y+IN+TS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL
Match: A0A6J1JBL6 (uncharacterized protein LOC111485298 OS=Cucurbita maxima OX=3661 GN=LOC111485298 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.8e-74
Identity = 141/153 (92.16%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIF+LFLFSALVSLSTQS DS DLK PPSSAHARLA+YGFPFGLLPS+V++Y+INETS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVG+ITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL
Match: A0A6J1H9T4 (uncharacterized protein LOC111461806 OS=Cucurbita moschata OX=3662 GN=LOC111461806 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.8e-74
Identity = 141/153 (92.16%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIF+LFLFSALVSLSTQS DS DLK PPSSAHARLA+YGFPFGLLPS+V++Y+INETS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVG+ITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. NCBI nr
Match: XP_038878918.1 (uncharacterized protein LOC120071008 [Benincasa hispida])

HSP 1 Score: 292.4 bits (747), Expect = 2.3e-75
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFL SALVSLSTQSIDSKDLKIPPS+AHARLADYGFPFGLLPSSV+TY+INETS
Sbjct: 1   MKSIFLLFLVSALVSLSTQSIDSKDLKIPPSAAHARLADYGFPFGLLPSSVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSIT IRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITAIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSDS 153

[Close]

BLAST of Lsi06G008960.1 vs. NCBI nr
Match: XP_008463372.1 (PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo] >KAA0046618.1 uncharacterized protein E6C27_scaffold114G001670 [Cucumis melo var. makuwa] >TYK00085.1 uncharacterized protein E5676_scaffold596G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.0e-75
Identity = 144/153 (94.12%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFLFSAL+ LSTQSIDSK+L IPPSSAHARLADYGFPFGLLPS+V+TY+INETS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. NCBI nr
Match: XP_004148715.1 (uncharacterized protein LOC101218800 [Cucumis sativus] >XP_031736120.1 uncharacterized protein LOC101218800 [Cucumis sativus] >KGN65370.1 hypothetical protein Csa_019712 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 6.8e-75
Identity = 143/153 (93.46%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIFLLFLFSAL+SLSTQSIDSK+L IPPSSAHARLADYGFPFGLLPS+V++Y+IN+TS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVGLITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. NCBI nr
Match: XP_022961236.1 (uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 uncharacterized protein LOC111485298 [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 9.8e-74
Identity = 141/153 (92.16%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIF+LFLFSALVSLSTQS DS DLK PPSSAHARLA+YGFPFGLLPS+V++Y+INETS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            EDLVFEVG+ITAKYPSKSFNESPVCEGRRS+S
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of Lsi06G008960.1 vs. NCBI nr
Match: XP_022144910.1 (uncharacterized protein LOC111014474 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 3.7e-73
Identity = 139/153 (90.85%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETS 60
           MKSIF+LF+FSALVSLSTQ+ DSKDLKIPPSSAHARLA+YGFPFGLLPSSV +Y+IN+TS
Sbjct: 1   MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+LDGIRVRALFQWWSITGIRS+
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWWSITGIRSS 120

Query: 121 DEDLVFEVGLITAKYPSKSFNESPVCEGRRSAS 154
            +DLVFEVGLITAKYPSKSFNESP CEGRRSAS
Sbjct: 121 GDDLVFEVGLITAKYPSKSFNESPACEGRRSAS 153

[Close]

BLAST of Lsi06G008960.1 vs. TAIR 10
Match: AT5G19590.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 171.0 bits (432), Expect = 7.3e-43
Identity = 86/147 (58.50%), Postives = 108/147 (73.47%), Query Frame = 0


Query: 7   LFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETSGDFSLD 66
           LFL S L+ L     D       P+ AHA L ++GFP GLLP SV  Y +N+TSGDFSL 
Sbjct: 5   LFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLF 64

Query: 67  LGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTDEDLVF 126
           L  +CK TLPPDNY+A++S  VTG+I++G+I  L GIRVRA F+ WSITGIRS+ ++LVF
Sbjct: 65  LNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVF 124

Query: 127 EVGLITAKYPSKSFNESPVCEGRRSAS 154
           EV  ITAKYPSK+F+ES  CEG+RS+S
Sbjct: 125 EVAGITAKYPSKNFDESLDCEGKRSSS 151

[Close]

BLAST of Lsi06G008960.1 vs. TAIR 10
Match: AT4G02360.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 88.2 bits (217), Expect = 6.2e-18
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 40  YGFPFGLLPSSVATYSINETSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHN 99
           Y  P G+LP  V  Y +N  +G+F +   D+C+FT+   +Y   +   ++G I+ G + N
Sbjct: 36  YNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTI--QSYQLKYKSTISGVISPGHVKN 95

Query: 100 LDGIRVRALFQWWSITGIRSTDEDLVFEVGLITAKYPSKSFNESPVC 147
           L G+ V+ LF W +I  +     DL F VG+ +A +P+ +F ESP C
Sbjct: 96  LKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQC 140

[Close]

BLAST of Lsi06G008960.1 vs. TAIR 10
Match: AT4G02370.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 13  LVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETSGDFSLDLGDSCK 72
           L SL+   + + +   P  +A++ L  Y FP G+LP  V  Y ++ T+G F     DSC 
Sbjct: 14  LSSLTAAVVTAAESDTP--TAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCS 73

Query: 73  FTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTDEDLVFEVGLIT 132
           F L   +Y  ++   ++G I++ ++  L G++V+ LF W +I  +    +++ F VG+ +
Sbjct: 74  FNL-VGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITS 133

Query: 133 AKYPSKSFNESPVC 147
           A +  + F ESP C
Sbjct: 134 ANFAIQEFLESPQC 144

[Close]

BLAST of Lsi06G008960.1 vs. TAIR 10
Match: AT1G02816.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17
Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 3   SIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETSGD 62
           SIF  FLF     L   + D     IP  +A+  L  Y FP G+LP  V +Y +++++G 
Sbjct: 7   SIFFFFLFCIPSPLIAAANDD---DIP--TAYTLLQSYNFPVGILPKGVVSYDLDKSTGQ 66

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTDE 122
           F      SC F L   +Y   +   ++G I++ +I  L G++V+ LF W +I  +    +
Sbjct: 67  FHAYFNKSCSFAL-QGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGD 126

Query: 123 DLVFEVGLITAKYPSKSFNESPVC 147
           +L F VG+ +A +    F ESP C
Sbjct: 127 ELEFSVGITSANFEIDEFYESPQC 144

[Close]

BLAST of Lsi06G008960.1 vs. TAIR 10
Match: AT1G02813.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16
Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 3   SIFLLFLFSALVSLSTQSIDSKDLKIPPSSAHARLADYGFPFGLLPSSVATYSINETSGD 62
           SIF++FL     S+S      +       S +  L +Y  P G+LP  V  Y +N  +G 
Sbjct: 2   SIFIIFLLLLSTSVSVSGQKKR-------SVYQVLENYTLPRGILPEGVHDYDLNRRTGV 61

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTDE 122
           F +    +C+F++  D+Y   +  V++G I +GR+  L G+ V+ LF W +I+ +    +
Sbjct: 62  FKVRFNTTCQFSI--DSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGD 121

Query: 123 DLVFEVGLITAKYPSKSFNESPVC 147
           D+ F VG  + ++ SK F +SP C
Sbjct: 122 DVEFFVGAASEEFSSKYFVDSPKC 136

The following BLAST results are available for this feature:

BLAST of Lsi06G008960.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G008960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BM00	1.9e-75	94.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJ18	1.9e-75	94.12	uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=...	[more]
A0A0A0LTW9	3.3e-75	93.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1	[more]
A0A6J1JBL6	4.8e-74	92.16	uncharacterized protein LOC111485298 OS=Cucurbita maxima OX=3661 GN=LOC111485298...	[more]
A0A6J1H9T4	4.8e-74	92.16	uncharacterized protein LOC111461806 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]

BLAST of Lsi06G008960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878918.1	2.3e-75	95.42	uncharacterized protein LOC120071008 [Benincasa hispida]	[more]
XP_008463372.1	4.0e-75	94.12	PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo] >KAA0046618.1 unc...	[more]
XP_004148715.1	6.8e-75	93.46	uncharacterized protein LOC101218800 [Cucumis sativus] >XP_031736120.1 uncharact...	[more]
XP_022961236.1	9.8e-74	92.16	uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 unchar...	[more]
XP_022144910.1	3.7e-73	90.85	uncharacterized protein LOC111014474 [Momordica charantia]	[more]

BLAST of Lsi06G008960.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19590.1	7.3e-43	58.50	Protein of unknown function, DUF538	[more]
AT4G02360.1	6.2e-18	35.51	Protein of unknown function, DUF538	[more]
AT4G02370.1	2.4e-17	30.60	Protein of unknown function, DUF538	[more]
AT1G02816.1	6.9e-17	32.64	Protein of unknown function, DUF538	[more]
AT1G02813.1	2.6e-16	31.25	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 16..145 e-value: 1.3E-26 score: 94.9
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 6..147
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 35..140 e-value: 2.6E-27 score: 95.5
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 13..153
None	No IPR available	PANTHER	PTHR31676:SF138	BNAA02G04340D PROTEIN	coord: 13..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G008960	Lsi06G008960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G008960.1.exon.1	Lsi06G008960.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G008960.1.five_prime_UTR.1	Lsi06G008960.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G008960.1.CDS.1	Lsi06G008960.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G008960.1	Lsi06G008960.1-protein	polypeptide