Lsi05G011360.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G011360.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ninja-family protein AFP2-like
Location	chr05: 19121583 .. 19123112 (-)
Sequence length	1409
RNA-Seq Expression	Lsi05G011360.1
Synteny	Lsi05G011360.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTACGTGTTTCCTTCCTAACCCCACCGCCCCTTTCATCTTCTCCCTGCCGCCACGTCGTCGATTCTCAATCACTCCATCCATATAATCCAAACCCACCAATCTTCTTTCCCCAAATTCATTCATCCCACGCTTGTTCTTCAAAGATGAAATCCATGGAGCTACTTGAACAAGACGACGATCTACACCTCGATTTAGCGCTTTCAATCGGCGGAACTTTCAGAAATTTACCGGAAAAATCAAATGGGTCTGATGAAGAAAGCGGAGTTACGGATGTTAAAAACAGAGGCGAGATCCGGCGACGACAAGCTAAGAGGAAACGAGAAGAGGATCGGAACAATCCGCCATTGAAGAGGGAAAAAACCCTTGAAGGTAATTTAACGAACAATGTAGATCTTGATAAACCAGATCCTGCTCTGCAAATTCCGTATCCTTACTCATCGTTGCAGTACGTGCCGTTTTTCAATGGCTATGGCTATGCGTTTCCCTGTTTCGTACCGTACTGTGCCGTCAGTGAGTCTCCGGTGGGTTGCCGGAGTGTTTCCGACGTTGGGTTTTCGAATAAGAAATCTGGGTCTTCTGGATCTTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATCATCAGAGTTCTTCCTCTCATGAAGGTACTTTTCAATTTCTTTCAAACCCTAATGAAAAACAAAAAAAAACCTTAATCTGGGTTTTGCTTAATGGGTTTCTATTTTGCTTTCAAGTAGATGATTCTGGTTGTTCATCTTCTTTCAGGAGGTAGTATCAATTCATGTAATTCATCAAGATCTATGAATCATGTTAAACCAAAGACTTCCAGTGAGAAATTTGTTGAAGAATCCTCTCATGTGAAGAAGATTTCTTCATCTTCTTCTTCAATGGAGAATGGGAAACCTCCAAAGCCTAAAATTCAAAGCCAGAATGTGGCAAGCTTTGATCAAATGCCTTGTGTTTCAACCACAGGGATTGGTCCTAATGGTACCAAAATCATAACTAATGGCTTCTTGTATAGATACTCAAACATGGAGGTCAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTTGTTAAGCACGGCGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTAATGGAAGTCTACCATCTTCAATCAGATGAAACCTCATAGATTTCATATAGATCTTTTAGAGCTTAACATTATTTTTTAGGTGTTGTCACAATGTGGCTGGCGATTTTGCTTCGATAGTATTTTATATTTGTAATTAGTGGTTATTAGAGATGTGTAAATTTTTTAATCCGTGTCTAACAAATATTAAGAGACAGTCACATTACGACCACTCCAATGAATGATTCAATATAAGAATGGACTTGCAACAAATATTGCAACCAGTCATTAGCTTATTTACTTGAATTATTTAAGATTGAGAAGAAAATATGGGCATGGTGGTAAGTTGAAAAAAAAAAACCATATCGTTTCAATAGATTTCTTATATTTCAGGTCC

mRNA sequence

CTCCTACGTGTTTCCTTCCTAACCCCACCGCCCCTTTCATCTTCTCCCTGCCGCCACGTCGTCGATTCTCAATCACTCCATCCATATAATCCAAACCCACCAATCTTCTTTCCCCAAATTCATTCATCCCACGCTTGTTCTTCAAAGATGAAATCCATGGAGCTACTTGAACAAGACGACGATCTACACCTCGATTTAGCGCTTTCAATCGGCGGAACTTTCAGAAATTTACCGGAAAAATCAAATGGGTCTGATGAAGAAAGCGGAGTTACGGATGTTAAAAACAGAGGCGAGATCCGGCGACGACAAGCTAAGAGGAAACGAGAAGAGGATCGGAACAATCCGCCATTGAAGAGGGAAAAAACCCTTGAAGGTAATTTAACGAACAATGTAGATCTTGATAAACCAGATCCTGCTCTGCAAATTCCGTATCCTTACTCATCGTTGCAGTACGTGCCGTTTTTCAATGGCTATGGCTATGCGTTTCCCTGTTTCGTACCGTACTGTGCCGTCAGTGAGTCTCCGGTGGGTTGCCGGAGTGTTTCCGACGTTGGGTTTTCGAATAAGAAATCTGGGTCTTCTGGATCTTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATCATCAGAGTTCTTCCTCTCATGAAGGAGGTAGTATCAATTCATGTAATTCATCAAGATCTATGAATCATGTTAAACCAAAGACTTCCAGTGAGAAATTTGTTGAAGAATCCTCTCATGTGAAGAAGATTTCTTCATCTTCTTCTTCAATGGAGAATGGGAAACCTCCAAAGCCTAAAATTCAAAGCCAGAATGTGGCAAGCTTTGATCAAATGCCTTGTGTTTCAACCACAGGGATTGGTCCTAATGGTACCAAAATCATAACTAATGGCTTCTTGTATAGATACTCAAACATGGAGGTCAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTTGTTAAGCACGGCGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTAATGGAAGTCTACCATCTTCAATCAGATGAAACCTCATAGATTTCATATAGATCTTTTAGAGCTTAACATTATTTTTTAGGTGTTGTCACAATGTGGCTGGCGATTTTGCTTCGATAGTATTTTATATTTGTAATTAGTGGTTATTAGAGATGTGTAAATTTTTTAATCCGTGTCTAACAAATATTAAGAGACAGTCACATTACGACCACTCCAATGAATGATTCAATATAAGAATGGACTTGCAACAAATATTGCAACCAGTCATTAGCTTATTTACTTGAATTATTTAAGATTGAGAAGAAAATATGGGCATGGTGGTAAGTTGAAAAAAAAAAACCATATCGTTTCAATAGATTTCTTATATTTCAGGTCC

Coding sequence (CDS)

ATGAAATCCATGGAGCTACTTGAACAAGACGACGATCTACACCTCGATTTAGCGCTTTCAATCGGCGGAACTTTCAGAAATTTACCGGAAAAATCAAATGGGTCTGATGAAGAAAGCGGAGTTACGGATGTTAAAAACAGAGGCGAGATCCGGCGACGACAAGCTAAGAGGAAACGAGAAGAGGATCGGAACAATCCGCCATTGAAGAGGGAAAAAACCCTTGAAGGTAATTTAACGAACAATGTAGATCTTGATAAACCAGATCCTGCTCTGCAAATTCCGTATCCTTACTCATCGTTGCAGTACGTGCCGTTTTTCAATGGCTATGGCTATGCGTTTCCCTGTTTCGTACCGTACTGTGCCGTCAGTGAGTCTCCGGTGGGTTGCCGGAGTGTTTCCGACGTTGGGTTTTCGAATAAGAAATCTGGGTCTTCTGGATCTTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATCATCAGAGTTCTTCCTCTCATGAAGGAGGTAGTATCAATTCATGTAATTCATCAAGATCTATGAATCATGTTAAACCAAAGACTTCCAGTGAGAAATTTGTTGAAGAATCCTCTCATGTGAAGAAGATTTCTTCATCTTCTTCTTCAATGGAGAATGGGAAACCTCCAAAGCCTAAAATTCAAAGCCAGAATGTGGCAAGCTTTGATCAAATGCCTTGTGTTTCAACCACAGGGATTGGTCCTAATGGTACCAAAATCATAACTAATGGCTTCTTGTATAGATACTCAAACATGGAGGTCAGTATTTTGTGTGTCTGCCATGGACAATCCTTTTCGCCGGCCGAGTTTGTTAAGCACGGCGGCGGCGGAGAAGTTTCTCACCCTTTGAAACACATTACTGTTCTTCCACCTAATGGAAGTCTACCATCTTCAATCAGATGA

Protein sequence

MKSMELLEQDDDLHLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKREEDRNNPPLKREKTLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPYCAVSESPVGCRSVSDVGFSNKKSGSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGSLPSSIR

Homology

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot
Match: Q94F39 (Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 200 KKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SNME 259
           K + +S SS ++      K  SQN+   + MP VSTTG GPNG KI  NGFLYRY    E
Sbjct: 135 KSVETSPSSAQSQPENLGKEASQNI--IEDMPFVSTTGDGPNGKKI--NGFLYRYRKGEE 194

Query: 260 VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
           V I+CVCHG   SPAEFVKH GGG+V+HPLKHI V P
Sbjct: 195 VRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 227

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot
Match: Q9LMX5 (Ninja-family protein AFP2 OS=Arabidopsis thaliana OX=3702 GN=AFP2 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-15
Identity = 61/172 (35.47%), Postives = 82/172 (47.67%), Query Frame = 0


Query: 136 GFSNKKSGSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSMNHV------------ 195
           G  +   G++G     S S + + +Q       GS NSCN  RS   V            
Sbjct: 184 GVDSDGGGATGGGSSSSLSELDNKNQQ------GSSNSCNDERSPKIVAGCSSNSGSQGT 243

Query: 196 -KPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNG 255
            +P  +    V E+ + K++ S  S    GK                MPCV T G GPNG
Sbjct: 244 ERPSVTRANKVNENENEKRVRSEDSVDRKGK------GMATSTGLVDMPCVFTKGDGPNG 303

Query: 256 TKIITNGFLYRY-SNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITV 294
            ++  +G LY+Y    EV I+C+CHG   +PAEFVKHGGGG+V  PL+HI V
Sbjct: 304 RRV--DGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVV 341

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot
Match: Q9LQ98 (Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.8e-14
Identity = 64/166 (38.55%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 142 SGSS--GSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSMNHVKPKTSSEKFVEESSHV 201
           SG S  G     SSS +S+    +SS E  S+ S    +     KP          ++ +
Sbjct: 203 SGESLGGGRAAGSSSSVSELETKASSDEARSLPSTTQPQQETTTKP----------TNRL 262

Query: 202 KKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SNME 261
           +++SS   +M+     K K          +MPCV T G GPNG ++  +G LYRY S  E
Sbjct: 263 RRLSSVDMNMKMEPQGKGK---------SEMPCVFTKGDGPNGKRV--DGILYRYGSGEE 322

Query: 262 VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGSLPSSI 305
           V I+CVCHG   SPA+FVKH GG  V HPL+HI V   N S PS++
Sbjct: 323 VRIMCVCHGDFLSPADFVKHAGGPHVDHPLRHIVV---NTSSPSNL 344

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot
Match: B1B5D3 (Ninja-family protein 1 OS=Triticum aestivum OX=4565 GN=AFP-A1 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12
Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 154 SVISDNHQSSSSHEGGSINSC--NSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMEN 213
           SV+   + SSS  E GS +     S+ SM       ++     +S      S ++  + N
Sbjct: 153 SVVDQGNPSSSMPEQGSGDGAEVKSTSSMEISSDNNNNASNQNKSLPPPAPSPAAGKLPN 212

Query: 214 G----KPPKPKIQSQNV----------ASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SN 273
           G    +PP   ++S  +          +  + MP VS+   GPNG KI  +GFLY+Y   
Sbjct: 213 GIVKEQPPLRTLRSLTMRTTSTGDLRKSMMEDMPMVSSKVDGPNGKKI--DGFLYKYRKG 272

Query: 274 MEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
            EV I+CVCHG   +PAEFVKH GGG+V++PL+HI V P
Sbjct: 273 EEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNP 309

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot
Match: Q10JI3 (Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0419100 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 62/162 (38.27%), Postives = 84/162 (51.85%), Query Frame = 0


Query: 143 GSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSMNHVKPKTSSEK----FVEESSH 202
           GS GSS         D      S E  S ++ + +   + + P  S+ K     V + S 
Sbjct: 154 GSQGSSSANPQDQGPDGSAICQSTEARSPSTSDDTNQNSALPPTASTGKPLNGTVTQQSP 213

Query: 203 VKKISS----SSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY 262
           ++ + S    +SS+ + GK                MP VS+   GPNG KI  +GFLY+Y
Sbjct: 214 LRTLGSLTMRTSSTGDIGK------------IMMDMPMVSSKVEGPNGRKI--DGFLYKY 273

Query: 263 SNME-VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
              E VSI+CVCHG+  SPAEFVKH GGG+VS+PL+HI V P
Sbjct: 274 RKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPLRHIVVNP 301

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL
Match: A0A5D3DQY3 (Ninja-family protein AFP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00180 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 1.1e-117
Identity = 241/309 (77.99%), Postives = 257/309 (83.17%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKRE 60
           MKSM L +Q    +LDL LSIGG F NLPEK NGSD+ESGVTDV NR +IRRR  KRKRE
Sbjct: 1   MKSMNLHQQ----NLDLRLSIGGPFNNLPEKLNGSDQESGVTDVNNRVDIRRRHGKRKRE 60

Query: 61  ED-RNNPPLKREKTLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPY 120
           ED  NNPP K  +   GN TNNVDL+KPDP LQI YPYSSLQYVPFFNGYGYA+PC VPY
Sbjct: 61  EDPNNNPPFKNRR---GNFTNNVDLNKPDPPLQISYPYSSLQYVPFFNGYGYAYPCLVPY 120

Query: 121 CAVSESPVGCRSVSDVGFSNKKSGSSGSSPVCSSSVISDN-HQSSSSHEGGSINSCNSSR 180
               ESPVGCR VSD G SNKKSGS GSSPVCSSSV+SDN H SSSS EGG  NS NSS 
Sbjct: 121 WPPDESPVGCRIVSDDGVSNKKSGSCGSSPVCSSSVVSDNHHHSSSSLEGGCSNSSNSSI 180

Query: 181 SMNHVKPKTSSEKFVE-ESSHVKKISSSSSSMENGKPPKPKIQSQ-NVASFDQMPCVSTT 240
           SM HVKPK  ++KFVE ESS VKK  SSSSSMENGKPPKP+IQ+Q NVASF+QMPCVSTT
Sbjct: 181 SMKHVKPKPCNKKFVEDESSQVKK--SSSSSMENGKPPKPQIQTQNNVASFEQMPCVSTT 240

Query: 241 GIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPP 300
           GIGPNGTKI+T GFLYRYSN+EVSILCVCHG+SFSPAEFVKHGGGGEVSHPLKHITVLPP
Sbjct: 241 GIGPNGTKIVTTGFLYRYSNLEVSILCVCHGRSFSPAEFVKHGGGGEVSHPLKHITVLPP 300

Query: 301 NGSLPSSIR 306
           NG  PSSIR
Sbjct: 301 NGFFPSSIR 300

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL
Match: A0A0A0L8T7 (TDBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G633290 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.7e-113
Identity = 231/296 (78.04%), Postives = 247/296 (83.45%), Query Frame = 0


Query: 14  HLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKREED-RNNPPLKREK 73
           +LDL LSIGG F +LPEK NGSD+ESGVTDV NR +IRRR  KRKREED  NNPP K  K
Sbjct: 6   NLDLRLSIGGPFTSLPEKLNGSDQESGVTDVNNRVDIRRRHGKRKREEDPNNNPPFKNRK 65

Query: 74  TLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPYCAVSESPVGCRSV 133
              GNLTNNVDL+KPDP L I YPYSS QY+PFFN YGYA+PC VPY    ESPV CRSV
Sbjct: 66  ---GNLTNNVDLNKPDPPLPISYPYSSFQYLPFFNAYGYAYPCLVPYWPPGESPVRCRSV 125

Query: 134 SDVGFSNKKSGSSGSSPVCSSSVISDN-HQSSSSHEGGSINSCNSSRSMNHVKPKTSSEK 193
           SD G SNKKSGSSGSSPVCSSSV+SDN H SSSS EGG  NS NSS SM HVKPK  ++K
Sbjct: 126 SDDGVSNKKSGSSGSSPVCSSSVVSDNHHHSSSSLEGGCSNSSNSSISMKHVKPKPCNKK 185

Query: 194 FVE-ESSHVKKISSSSSSMENGKPPKPKIQSQ-NVASFDQMPCVSTTGIGPNGTKIITNG 253
           FVE +SS VKK  S SSSMENGKPPKP+IQ+Q N+ASF+QMPCVSTTGIGPNGTKIIT G
Sbjct: 186 FVEDQSSQVKK--SFSSSMENGKPPKPQIQTQNNMASFEQMPCVSTTGIGPNGTKIITTG 245

Query: 254 FLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGSLPSSIR 306
           FLYRYSN+EVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPP G  PSSIR
Sbjct: 246 FLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPTGIFPSSIR 296

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL
Match: A0A6J1HHX8 (ninja-family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463802 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.8e-104
Identity = 230/322 (71.43%), Postives = 247/322 (76.71%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEK----SNGSDEESGVTDVKNRGEIRRRQAK 60
           MKS  + E+  DL LDL LSIGG FRNLPEK    +NGSDEESGVTD K R  IRR +AK
Sbjct: 1   MKSAVIREEGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  RKREEDRNNPPLKREKTLEG-----NLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGY 120
           RKREE+RN  PLKREK LEG     +L NNVD       LQ PYPYSSLQYVPF NGYGY
Sbjct: 61  RKREEERNR-PLKREKKLEGLGSECDLMNNVD-------LQNPYPYSSLQYVPFLNGYGY 120

Query: 121 AFPCFVPYCAVSE-----SPVGCRSVSDVGFS-NKKSGSSGSSPVCSSSVISDNHQSSSS 180
            FPC  PY AV E       V CRSV DVG S N+K+GSSGSSPVCSSSVISDN+ SSSS
Sbjct: 121 PFPCLTPYWAVGERTLHQPAVACRSVPDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSS 180

Query: 181 HEGGS--INSCNSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQN 240
           HEG S   NSCNSS S NHVKPK  SEKFVE  SHV K    +SSM NGKPPKP+IQS++
Sbjct: 181 HEGVSSRSNSCNSS-SKNHVKPKACSEKFVE--SHVSKPRIKNSSMVNGKPPKPEIQSRH 240

Query: 241 VASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGE 300
           V SF+QMPCVSTTGI PNGTK IT GFLYRYSN EVSILCVCHG+SFSPAEFV+HGGGGE
Sbjct: 241 VQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNSEVSILCVCHGESFSPAEFVRHGGGGE 300

Query: 301 VSHPLKHITVLPPNGSLPSSIR 306
           VSHPLKHITVLP NG +PSSIR
Sbjct: 301 VSHPLKHITVLPTNGIVPSSIR 311

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL
Match: A0A6J1HQF5 (ninja-family protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111466860 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 7.5e-103
Identity = 228/322 (70.81%), Postives = 246/322 (76.40%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEK----SNGSDEESGVTDVKNRGEIRRRQAK 60
           MK   + E+D DL LDL LSIGG FRNLPEK    +NGSDEESGVTD K R  IRR +AK
Sbjct: 1   MKLAVIREEDGDLDLDLGLSIGGGFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  RKREEDRNNPPLKREKTLEG-----NLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGY 120
           RKREE+RN  PLKREK LEG     +L NNVD       LQ PYPYSSLQYVPF NGYGY
Sbjct: 61  RKREEERNR-PLKREKKLEGLGSECDLMNNVD-------LQNPYPYSSLQYVPFINGYGY 120

Query: 121 AFPCFVPYCAVSE-----SPVGCRSVSDVGFS-NKKSGSSGSSPVCSSSVISDNHQSSSS 180
           AFPC  PY A  E       V CRSVSDVG S N+K+GSSGSSPVCSSSVISDN+ SSSS
Sbjct: 121 AFPCLTPYWAAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSS 180

Query: 181 HEGGS--INSCNSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQN 240
           HEG S   NSCNSS S NHVK K  SEK VE  SHV K    +SSM NGKPPKP+IQS++
Sbjct: 181 HEGVSSRSNSCNSS-SKNHVKSKPCSEKLVE--SHVSKPRIKNSSMVNGKPPKPEIQSRH 240

Query: 241 VASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGE 300
           V SF+QMPCVSTTGI PNGTK IT GFLYRYSN+EVSILC CHG+SFSPAEFVKHGGGG+
Sbjct: 241 VQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCGCHGESFSPAEFVKHGGGGQ 300

Query: 301 VSHPLKHITVLPPNGSLPSSIR 306
           VSHPLKHITVLP NG +PSSIR
Sbjct: 301 VSHPLKHITVLPTNGIVPSSIR 311

[Close]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL
Match: A0A6J1K6T7 (ninja-family protein AFP2-like OS=Cucurbita maxima OX=3661 GN=LOC111491188 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 6.6e-75
Identity = 206/390 (52.82%), Postives = 240/390 (61.54%), Query Frame = 0


Query: 1   MKSMELL-EQDDDLHLDLALSIGGTFRNLPEKS------------NGSDEESGVTDVKNR 60
           MKS+ L  E ++D+ +DLALSIGG FR LPEKS            +G +E+SGVTD KNR
Sbjct: 1   MKSVVLPDENNNDVDVDLALSIGGVFRTLPEKSTASGSSFTLWINDGDEEDSGVTDAKNR 60

Query: 61  GEIRRRQAKRKR-EEDRNNPPLKREKTLEG-NLTNNVDLD--KPDPALQIPYPYSSLQYV 120
           G+IRRR+ KRKR EED  NPPLKREK L+G     NVD +  + + A  +PYPYSSLQYV
Sbjct: 61  GQIRRRETKRKRDEEDERNPPLKREKKLQGVGYECNVDREECRNETAELMPYPYSSLQYV 120

Query: 121 PFFNGYGYAFPCFVPYCAVS--------ESPVGCRSVSDV--------GFS----NKKSG 180
           PF N  G+  PC VPY A +          PV CRS            GFS    N+K+G
Sbjct: 121 PFMN--GFVLPCVVPYWAAAGHGGERTVHQPVACRSFRPFETDRRGLDGFSNGRTNRKTG 180

Query: 181 SSGSSPVCSSSVISDNHQSSSSHEG-GSI----NSCNSSR------------------SM 240
           S GSSPVCSSSVISDN+Q SSSHEG GS     NSCNSS                   SM
Sbjct: 181 SCGSSPVCSSSVISDNYQ-SSSHEGCGSSYTRNNSCNSSSDRHQMRCPNSNSNPNTNDSM 240

Query: 241 NHVKPKTSSEKFVE-----ESSHVKK---ISSSSS-----------------SMENGKPP 300
           NH KPK  SE   +       SHV K   I++SS+                  MEN + P
Sbjct: 241 NHDKPKPCSENRTQCEEKSGESHVHKKEPITASSNKSVFNSQRSPSMSIKNMKMENEELP 300

Query: 301 KPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEF 306
           KP+I S+NV S  QMPCVSTTG+GPNG  I   GFLYRYSN+EVSILCVCHG+SFSPAEF
Sbjct: 301 KPQILSRNVPSLQQMPCVSTTGVGPNGKTI--TGFLYRYSNLEVSILCVCHGESFSPAEF 360

[Close]

BLAST of Lsi05G011360.1 vs. NCBI nr
Match: XP_038888156.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120078043 [Benincasa hispida])

HSP 1 Score: 513.1 bits (1320), Expect = 1.7e-141
Identity = 264/302 (87.42%), Postives = 273/302 (90.40%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKRE 60
           MKSMEL E+++DLHLDLALSIGGTFRN PEKSNGSDEESGVTD KNRGEIRRRQ KRKRE
Sbjct: 1   MKSMELHEENNDLHLDLALSIGGTFRNSPEKSNGSDEESGVTDAKNRGEIRRRQCKRKRE 60

Query: 61  EDRNNPPLKREKTLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPYC 120
           EDRNNPP K+EK LEGNL NNVDL KP+PA+Q PYPYS LQYVPF NGYGYAFPCFVPY 
Sbjct: 61  EDRNNPPFKKEKYLEGNLKNNVDLHKPNPAVQFPYPYSLLQYVPFLNGYGYAFPCFVPYF 120

Query: 121 AVSESPVGCRSVSDVGFSNKKSGSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSM 180
           A  ESPVGCRS SDVGF NKKSGS GSSPVCSSSV+SDNH SSSSHEGGS NSCNSS SM
Sbjct: 121 AAGESPVGCRSGSDVGFWNKKSGSCGSSPVCSSSVVSDNHHSSSSHEGGSSNSCNSSISM 180

Query: 181 NHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGP 240
           NHVKP  SSEKFVEESS  KK  SSSSS+ENGKPPKPKIQSQNVASFDQMPCVSTTG GP
Sbjct: 181 NHVKPNPSSEKFVEESSKFKKSCSSSSSVENGKPPKPKIQSQNVASFDQMPCVSTTGFGP 240

Query: 241 NGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGSL 300
           NGTKIIT GFLYRYSN+EVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNG L
Sbjct: 241 NGTKIITTGFLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGIL 300

Query: 301 PS 303
           PS
Sbjct: 301 PS 302

[Close]

BLAST of Lsi05G011360.1 vs. NCBI nr
Match: KAA0068079.1 (ninja-family protein AFP2-like [Cucumis melo var. makuwa] >TYK26063.1 ninja-family protein AFP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 433.0 bits (1112), Expect = 2.2e-117
Identity = 241/309 (77.99%), Postives = 257/309 (83.17%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKRE 60
           MKSM L +Q    +LDL LSIGG F NLPEK NGSD+ESGVTDV NR +IRRR  KRKRE
Sbjct: 1   MKSMNLHQQ----NLDLRLSIGGPFNNLPEKLNGSDQESGVTDVNNRVDIRRRHGKRKRE 60

Query: 61  ED-RNNPPLKREKTLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPY 120
           ED  NNPP K  +   GN TNNVDL+KPDP LQI YPYSSLQYVPFFNGYGYA+PC VPY
Sbjct: 61  EDPNNNPPFKNRR---GNFTNNVDLNKPDPPLQISYPYSSLQYVPFFNGYGYAYPCLVPY 120

Query: 121 CAVSESPVGCRSVSDVGFSNKKSGSSGSSPVCSSSVISDN-HQSSSSHEGGSINSCNSSR 180
               ESPVGCR VSD G SNKKSGS GSSPVCSSSV+SDN H SSSS EGG  NS NSS 
Sbjct: 121 WPPDESPVGCRIVSDDGVSNKKSGSCGSSPVCSSSVVSDNHHHSSSSLEGGCSNSSNSSI 180

Query: 181 SMNHVKPKTSSEKFVE-ESSHVKKISSSSSSMENGKPPKPKIQSQ-NVASFDQMPCVSTT 240
           SM HVKPK  ++KFVE ESS VKK  SSSSSMENGKPPKP+IQ+Q NVASF+QMPCVSTT
Sbjct: 181 SMKHVKPKPCNKKFVEDESSQVKK--SSSSSMENGKPPKPQIQTQNNVASFEQMPCVSTT 240

Query: 241 GIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPP 300
           GIGPNGTKI+T GFLYRYSN+EVSILCVCHG+SFSPAEFVKHGGGGEVSHPLKHITVLPP
Sbjct: 241 GIGPNGTKIVTTGFLYRYSNLEVSILCVCHGRSFSPAEFVKHGGGGEVSHPLKHITVLPP 300

Query: 301 NGSLPSSIR 306
           NG  PSSIR
Sbjct: 301 NGFFPSSIR 300

[Close]

BLAST of Lsi05G011360.1 vs. NCBI nr
Match: XP_004144458.3 (ninja-family protein AFP3 [Cucumis sativus] >KAE8650858.1 hypothetical protein Csa_000898 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 4.8e-112
Identity = 230/296 (77.70%), Postives = 246/296 (83.11%), Query Frame = 0


Query: 14  HLDLALSIGGTFRNLPEKSNGSDEESGVTDVKNRGEIRRRQAKRKREED-RNNPPLKREK 73
           +LDL LSIGG F +LPEK NGSD+ESGVTDV NR +IRRR  KRKREED  NNPP K  K
Sbjct: 6   NLDLRLSIGGPFTSLPEKLNGSDQESGVTDVNNRVDIRRRHGKRKREEDPNNNPPFKNRK 65

Query: 74  TLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVPYCAVSESPVGCRSV 133
              GN TNNVDL+KPDP L I YPYSS QY+PFFN YGYA+PC VPY    ESPV CRSV
Sbjct: 66  ---GNSTNNVDLNKPDPPLPISYPYSSFQYLPFFNAYGYAYPCLVPYWPPGESPVRCRSV 125

Query: 134 SDVGFSNKKSGSSGSSPVCSSSVISDN-HQSSSSHEGGSINSCNSSRSMNHVKPKTSSEK 193
           SD G SNKKSGSSGSSPVCSSSV+SDN H SSSS EGG  NS NSS SM HVKPK  ++K
Sbjct: 126 SDDGVSNKKSGSSGSSPVCSSSVVSDNHHHSSSSLEGGCSNSSNSSISMKHVKPKPCNKK 185

Query: 194 FVE-ESSHVKKISSSSSSMENGKPPKPKIQSQ-NVASFDQMPCVSTTGIGPNGTKIITNG 253
           FVE +SS VKK  S SSSMENGKPPKP+IQ+Q N+ASF+QMPCVSTTGIGPNGTKIIT G
Sbjct: 186 FVEDQSSQVKK--SFSSSMENGKPPKPQIQTQNNMASFEQMPCVSTTGIGPNGTKIITTG 245

Query: 254 FLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPNGSLPSSIR 306
           FLYRYSN+EVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPP G  PSSIR
Sbjct: 246 FLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPTGIFPSSIR 296

[Close]

BLAST of Lsi05G011360.1 vs. NCBI nr
Match: XP_022963483.1 (ninja-family protein 4-like [Cucurbita moschata] >XP_022963484.1 ninja-family protein 4-like [Cucurbita moschata])

HSP 1 Score: 389.0 bits (998), Expect = 3.7e-104
Identity = 230/322 (71.43%), Postives = 247/322 (76.71%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEK----SNGSDEESGVTDVKNRGEIRRRQAK 60
           MKS  + E+  DL LDL LSIGG FRNLPEK    +NGSDEESGVTD K R  IRR +AK
Sbjct: 1   MKSAVIREEGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  RKREEDRNNPPLKREKTLEG-----NLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGY 120
           RKREE+RN  PLKREK LEG     +L NNVD       LQ PYPYSSLQYVPF NGYGY
Sbjct: 61  RKREEERNR-PLKREKKLEGLGSECDLMNNVD-------LQNPYPYSSLQYVPFLNGYGY 120

Query: 121 AFPCFVPYCAVSE-----SPVGCRSVSDVGFS-NKKSGSSGSSPVCSSSVISDNHQSSSS 180
            FPC  PY AV E       V CRSV DVG S N+K+GSSGSSPVCSSSVISDN+ SSSS
Sbjct: 121 PFPCLTPYWAVGERTLHQPAVACRSVPDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSS 180

Query: 181 HEGGS--INSCNSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQN 240
           HEG S   NSCNSS S NHVKPK  SEKFVE  SHV K    +SSM NGKPPKP+IQS++
Sbjct: 181 HEGVSSRSNSCNSS-SKNHVKPKACSEKFVE--SHVSKPRIKNSSMVNGKPPKPEIQSRH 240

Query: 241 VASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGE 300
           V SF+QMPCVSTTGI PNGTK IT GFLYRYSN EVSILCVCHG+SFSPAEFV+HGGGGE
Sbjct: 241 VQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNSEVSILCVCHGESFSPAEFVRHGGGGE 300

Query: 301 VSHPLKHITVLPPNGSLPSSIR 306
           VSHPLKHITVLP NG +PSSIR
Sbjct: 301 VSHPLKHITVLPTNGIVPSSIR 311

[Close]

BLAST of Lsi05G011360.1 vs. NCBI nr
Match: XP_023553726.1 (ninja-family protein AFP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-102
Identity = 228/322 (70.81%), Postives = 245/322 (76.09%), Query Frame = 0


Query: 1   MKSMELLEQDDDLHLDLALSIGGTFRNLPEK----SNGSDEESGVTDVKNRGEIRRRQAK 60
           MKS  + E+  DL LDL LSIGG FRNLPEK    +NGSDEESGVTD K R  IRR +AK
Sbjct: 1   MKSAVIREEGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  RKREEDRNNPPLKREKTL-----EGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGY 120
           RKREE+RN  PLKREK L     E +L NNVD       LQ PYPYSSLQYVPF NGYGY
Sbjct: 61  RKREEERNR-PLKREKKLDRLGSECDLMNNVD-------LQNPYPYSSLQYVPFINGYGY 120

Query: 121 AFPCFVPYCAVSE-----SPVGCRSVSDVGFS-NKKSGSSGSSPVCSSSVISDNHQSSSS 180
           AFPC  PY A  E       V CRSVSDVG S N+K+GSSGSSPVCSSSVISDN+ SSSS
Sbjct: 121 AFPCLTPYWAAGERTLHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSS 180

Query: 181 HEGGS--INSCNSSRSMNHVKPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQN 240
           HEG S   NSCNSS S NHVKPK  SEKFVE  SHV K    +SSM NGKPPKP IQS++
Sbjct: 181 HEGVSSRSNSCNSS-SKNHVKPKACSEKFVE--SHVSKPRIKNSSMVNGKPPKPAIQSRH 240

Query: 241 VASFDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGE 300
           V SF+QMPCVSTTGI PNGTK IT GFLYRYSN+EVSILCVCHG+SFSPA FVKHGGGGE
Sbjct: 241 VQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAGFVKHGGGGE 300

Query: 301 VSHPLKHITVLPPNGSLPSSIR 306
           VSHPLKHITVLP NG +PS +R
Sbjct: 301 VSHPLKHITVLPTNGIVPSWVR 311

[Close]

BLAST of Lsi05G011360.1 vs. TAIR 10
Match: AT3G07250.1 (nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29
Identity = 108/308 (35.06%), Postives = 149/308 (48.38%), Query Frame = 0


Query: 12  DLHLDLALSIGGTFRNLP-------------EKSNGSDEESGVTDVKNRGEIRRRQAKRK 71
           +L L+L LS+GG F+                EK NG + +   T+V    E R+++  ++
Sbjct: 14  ELELELCLSLGGPFKKTEKSKTFGQSNAVGFEKDNGVNLDGRTTNVTRIKETRKKREAKQ 73

Query: 72  REEDRNNPPLKREKTLEGNLTNNVDLDKPDPALQIPYPYSSLQYVPFFNGYGYAFPCFVP 131
           ++        KR +T    ++N  D+D              L  +   NGYG        
Sbjct: 74  QQRSGEEGECKRIRTEYNGVSNGDDMD--------------LSSINMCNGYGSG------ 133

Query: 132 YCAVSESPVGCRSVSDVGFSNKKSGSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSR 191
              + ES        DV            SP+C+SS +SD   SSS  EGGS +    S 
Sbjct: 134 --RLKESS------KDVTI---------GSPICTSSSVSD-PSSSSRQEGGSGDIGAQSG 193

Query: 192 SMNHVKPK-----TSSEKFV-----EESSHVKKISSSSSSMENGKPPKPKIQSQNVAS-- 251
               V+       T +E+ V      + +  ++ S+SS + E+GKPPKP   S    S  
Sbjct: 194 QTKQVRSPVNNILTGTEQTVHNTDGSKDAETQEWSNSSVTKESGKPPKPHTNSNGNGSLL 253

Query: 252 -FDQMPCVSTTGIGPNGTKIITNGFLYRYSNMEVSILCVCHGQSFSPAEFVKHGGGGEVS 294
            F QMPCV++TG GP G  +  NGFLYRYS  E+SI+CVCHG SFSPAEF+ H GG  VS
Sbjct: 254 PFAQMPCVTSTGNGPEGKTV--NGFLYRYSKSEISIICVCHGTSFSPAEFIVHAGGTNVS 281

[Close]

BLAST of Lsi05G011360.1 vs. TAIR 10
Match: AT3G29575.1 (ABI five binding protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 200 KKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SNME 259
           K + +S SS ++      K  SQN+   + MP VSTTG GPNG KI  NGFLYRY    E
Sbjct: 135 KSVETSPSSAQSQPENLGKEASQNI--IEDMPFVSTTGDGPNGKKI--NGFLYRYRKGEE 194

Query: 260 VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
           V I+CVCHG   SPAEFVKH GGG+V+HPLKHI V P
Sbjct: 195 VRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 227

[Close]

BLAST of Lsi05G011360.1 vs. TAIR 10
Match: AT3G29575.3 (ABI five binding protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 200 KKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SNME 259
           K + +S SS ++      K  SQN+   + MP VSTTG GPNG KI  NGFLYRY    E
Sbjct: 135 KSVETSPSSAQSQPENLGKEASQNI--IEDMPFVSTTGDGPNGKKI--NGFLYRYRKGEE 194

Query: 260 VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
           V I+CVCHG   SPAEFVKH GGG+V+HPLKHI V P
Sbjct: 195 VRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 227

[Close]

BLAST of Lsi05G011360.1 vs. TAIR 10
Match: AT3G29575.4 (ABI five binding protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 56/97 (57.73%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 200 KKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNGTKIITNGFLYRY-SNME 259
           K + +S SS ++      K  SQN+   + MP VSTTG GPNG KI  NGFLYRY    E
Sbjct: 135 KSVETSPSSAQSQPENLGKEASQNI--IEDMPFVSTTGDGPNGKKI--NGFLYRYRKGEE 194

Query: 260 VSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLP 296
           V I+CVCHG   SPAEFVKH GGG+V+HPLKHI V P
Sbjct: 195 VRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 227

[Close]

BLAST of Lsi05G011360.1 vs. TAIR 10
Match: AT1G13740.1 (ABI five binding protein 2 )

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-16
Identity = 61/172 (35.47%), Postives = 82/172 (47.67%), Query Frame = 0


Query: 136 GFSNKKSGSSGSSPVCSSSVISDNHQSSSSHEGGSINSCNSSRSMNHV------------ 195
           G  +   G++G     S S + + +Q       GS NSCN  RS   V            
Sbjct: 184 GVDSDGGGATGGGSSSSLSELDNKNQQ------GSSNSCNDERSPKIVAGCSSNSGSQGT 243

Query: 196 -KPKTSSEKFVEESSHVKKISSSSSSMENGKPPKPKIQSQNVASFDQMPCVSTTGIGPNG 255
            +P  +    V E+ + K++ S  S    GK                MPCV T G GPNG
Sbjct: 244 ERPSVTRANKVNENENEKRVRSEDSVDRKGK------GMATSTGLVDMPCVFTKGDGPNG 303

Query: 256 TKIITNGFLYRY-SNMEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITV 294
            ++  +G LY+Y    EV I+C+CHG   +PAEFVKHGGGG+V  PL+HI V
Sbjct: 304 RRV--DGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVV 341

The following BLAST results are available for this feature:

BLAST of Lsi05G011360.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94F39	1.5e-20	57.73	Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1	[more]
Q9LMX5	3.3e-15	35.47	Ninja-family protein AFP2 OS=Arabidopsis thaliana OX=3702 GN=AFP2 PE=1 SV=1	[more]
Q9LQ98	2.8e-14	38.55	Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1	[more]
B1B5D3	3.4e-12	36.48	Ninja-family protein 1 OS=Triticum aestivum OX=4565 GN=AFP-A1 PE=3 SV=1	[more]
Q10JI3	1.3e-11	38.27	Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]

BLAST of Lsi05G011360.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DQY3	1.1e-117	77.99	Ninja-family protein AFP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L8T7	4.7e-113	78.04	TDBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G633290 PE=3 S...	[more]
A0A6J1HHX8	1.8e-104	71.43	ninja-family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463802 PE=3 S...	[more]
A0A6J1HQF5	7.5e-103	70.81	ninja-family protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111466860 PE=3 SV=...	[more]
A0A6J1K6T7	6.6e-75	52.82	ninja-family protein AFP2-like OS=Cucurbita maxima OX=3661 GN=LOC111491188 PE=3 ...	[more]

BLAST of Lsi05G011360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888156.1	1.7e-141	87.42	LOW QUALITY PROTEIN: uncharacterized protein LOC120078043 [Benincasa hispida]	[more]
KAA0068079.1	2.2e-117	77.99	ninja-family protein AFP2-like [Cucumis melo var. makuwa] >TYK26063.1 ninja-fami...	[more]
XP_004144458.3	4.8e-112	77.70	ninja-family protein AFP3 [Cucumis sativus] >KAE8650858.1 hypothetical protein C...	[more]
XP_022963483.1	3.7e-104	71.43	ninja-family protein 4-like [Cucurbita moschata] >XP_022963484.1 ninja-family pr...	[more]
XP_023553726.1	1.5e-102	70.81	ninja-family protein AFP2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G011360.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07250.1	2.4e-29	35.06	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-c...	[more]
AT3G29575.1	1.1e-21	57.73	ABI five binding protein 3	[more]
AT3G29575.3	1.1e-21	57.73	ABI five binding protein 3	[more]
AT3G29575.4	1.1e-21	57.73	ABI five binding protein 3	[more]
AT1G13740.1	2.3e-16	35.47	ABI five binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032308	Jas TPL-binding domain	PFAM	PF16135	TDBD	coord: 260..292 e-value: 1.5E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..198
None	No IPR available	PANTHER	PTHR31413:SF15	NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN	coord: 6..179
None	No IPR available	PANTHER	PTHR31413:SF15	NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN	coord: 178..295
IPR031307	Ninja family	PANTHER	PTHR31413	AFP HOMOLOG 2	coord: 178..295
IPR031307	Ninja family	PANTHER	PTHR31413	AFP HOMOLOG 2	coord: 6..179

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G011360	Lsi05G011360	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G011360.1.exon.2	Lsi05G011360.1.exon.2	exon
Lsi05G011360.1.exon.1	Lsi05G011360.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G011360.1.three_prime_UTR.1	Lsi05G011360.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G011360.1.CDS.2	Lsi05G011360.1.CDS.2	CDS
Lsi05G011360.1.CDS.1	Lsi05G011360.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G011360.1.five_prime_UTR.1	Lsi05G011360.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G011360.1	Lsi05G011360.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005634	nucleus