Lsi05G009290.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G009290.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr05: 16470148 .. 16471990 (+)
Sequence length324
RNA-Seq ExpressionLsi05G009290.1
SyntenyLsi05G009290.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGTTTTTGATGGAGTTGCCGAGTTTGATTAAGCATCATCGTTATTCTTAAAGAATTCAGTTATTGTGGCAGCTGAACAAGAGAAGGAGTGTTTCATTCTTGCGACTGTTTCTGTAGCAGTCATGGTTGTGGGAAACTTTGCAAAGAAGAATGTTCTTGATCTTAGGGTGAACCTAAGGTTTATACATTGCAAGAGAAGGGATTTTCTAACTTAGACGGAGCCTAAGTATTTGCATAACAAGTTGAGTTATTCGTGTGTTACTGTATTTGTCGTAGATTTAAAGATAAGTATACCGTTATAATTACTTAACTTATATTAGTAAAAGTTTTTTTCCACGGGCATCCTGCTCCCCGGACGTAGGTGGTGTTTCGTCGAATTGGATTTATGATCATGTGTTTTGTTTGTTCTTGCTTATCTCTTTACTATCTAGTTGTTACTGATTTCGCAATGGTTTTGTGTGTAACATTGTTACAGTGTGGTTGAATCCCTTTATTTCACCTAGAAAAATACCTTTTTGGTCTTTAGATTTTAGGTTTAGTTTCTATTTGATCTCAACTTCCAAAATGTTACATTTTTAGTCATAAATTTGAGTTTGGTTTCAACTCAGTCCTTAAATTTCAAAATGTTACAATCTTACCCTTGAGATTTGAGTTTTGTTTTAATTTGGTCCCTAAATTTCAAGATTTACACTTTTAAACTCGATTGTTTACTAAATATTCACTTTCTGTCTTTAATGTTAATGTATATTAATTAATTTAAAAGATTTAAAATAATTATAATTTATTTATTTTTCATCACTGTTAGATTAAATTTAAAATTTTACTTCATAACCATTTTAAATTAATTAATAGGTCATTAACATCAATGACTAAAAGTGAGTATTTAATGAAAAATCGAAGTTAAAAGGATAGATCTTGAAACTTAGAGACCAAATTGAAACAAAACGCAAATGTCAAACGTAAAATTGTAACATTTTGAAACCTAAAACCAAACTCAAAACTTAAAGACTAAATGTATAACATTTTGAAAGTAGTAACCAAATAGAAACTTGACCCGAAACCTAGGGACCAAAAAGATATTATTTCCTATTTTATAAGTGGATTGGCCTAAAAAAATTTTTTATCACATTTTGTATTAACTAATGATATGTTTGAATTGACTTTTTAAGTATTTAAAAGTCAAACTAAACAGATTTAGATCTAATCACTCCTCAGTAAGGAAAAATTGTATAAAACTTTCCAATATTCTATTTTAATTATTCAAAGGTAGAAAAAAAAATATTTGTTGGAGAGAGAGAGAAAAAGGGTTGAACAACGATAATAACTAACTAACTGCATAAGCTGCTGCCAGGTTGAAAAATTAAGCATTAATAACCTCAAAATCCAGTTCCCATTGTTAATAAGATTCATGATACAAAGGAAAATAGGAAAGGGAGATTTTAGAAATAGAAATGGGGGTAATAATTTTACTTAAAAATCATAATCAGAGGTCTTAATATATTAATTATTAATTAGATAGAAACCCAGAGTGGCTCCCAATTGAGCAAGTCTTTGCTCTGGTGCCTGCCTTGTTTGCATCTGCTACTGCTGCAACTGCGTGGCCTTCCAAAATTTTCCATTCCCATTTCTTCCGCATCATCATCAACCAAGTTCACTTCCTCTTCATCTTCTTCATCCCTCTTTTCAATGTCTTTCACCAGCTGAAGTTTAAGCCTCCCATGGCTACGTTCTGCTTGAAAGTAGCTGCTGGGAGAAGTAGAACATACCATGCCTTTCAACACCAGCCGCCCATTTTCTCTGTAGGACTCAACTCTGATGTTTGTGGAGCCACTTATTGA

mRNA sequence

ATGAGAAACCCAGAGTGGCTCCCAATTGAGCAAGTCTTTGCTCTGGTGCCTGCCTTGTTTGCATCTGCTACTGCTGCAACTGCGTGGCCTTCCAAAATTTTCCATTCCCATTTCTTCCGCATCATCATCAACCAAGTTCACTTCCTCTTCATCTTCTTCATCCCTCTTTTCAATGTCTTTCACCAGCTGAAGTTTAAGCCTCCCATGGCTACGTTCTGCTTGAAAGTAGCTGCTGGGAGAAGTAGAACATACCATGCCTTTCAACACCAGCCGCCCATTTTCTCTGTAGGACTCAACTCTGATGTTTGTGGAGCCACTTATTGA

Coding sequence (CDS)

ATGAGAAACCCAGAGTGGCTCCCAATTGAGCAAGTCTTTGCTCTGGTGCCTGCCTTGTTTGCATCTGCTACTGCTGCAACTGCGTGGCCTTCCAAAATTTTCCATTCCCATTTCTTCCGCATCATCATCAACCAAGTTCACTTCCTCTTCATCTTCTTCATCCCTCTTTTCAATGTCTTTCACCAGCTGAAGTTTAAGCCTCCCATGGCTACGTTCTGCTTGAAAGTAGCTGCTGGGAGAAGTAGAACATACCATGCCTTTCAACACCAGCCGCCCATTTTCTCTGTAGGACTCAACTCTGATGTTTGTGGAGCCACTTATTGA

Protein sequence

MRNPEWLPIEQVFALVPALFASATAATAWPSKIFHSHFFRIIINQVHFLFIFFIPLFNVFHQLKFKPPMATFCLKVAAGRSRTYHAFQHQPPIFSVGLNSDVCGATY
Homology
The following BLAST results are available for this feature:
BLAST of Lsi05G009290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G009290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G009290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G009290.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi05G009290Lsi05G009290gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G009290.1.exon.1Lsi05G009290.1.exon.1exon
Lsi05G009290.1.exon.2Lsi05G009290.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G009290.1.CDS.1Lsi05G009290.1.CDS.1CDS
Lsi05G009290.1.CDS.2Lsi05G009290.1.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi05G009290.1Lsi05G009290.1-proteinpolypeptide