Lsi05G007050.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G007050.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ABC transporter domain-containing protein
Location	chr05: 9451100 .. 9453523 (-)
Sequence length	675
RNA-Seq Expression	Lsi05G007050.1
Synteny	Lsi05G007050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAGCTTTCATCCTACTTCATATCAAAAACAGTGGATGACCTGCCCTTGGAGCTGGCTCTTCCCACTCTTTTCACTCTCATAGTGTATTGGATGGCAGGCTTAAAACCAACTCTTGCACATTTCTTGGCCACTTTGTTTACCATTCTCCTCAATGTTTTGGCGTTTCAAGGCTTTGGCTTTGCCATTGGCACACTTAACATGGACCAAACTGCAGCCACTGTATTTGGATCAGTCTTGGCTTTGTCTTTCAATATAACACAACTGGATATTTTGTCCAGAATGTGCCTGAGTTTATAGCTTGGGTTAAGTATATTTCTATTGGTCATTTTACGTACAAGCTTATGTTGATCTCTCAGTACAAAGCTGATGATACTTATCCATGTTCTATCTCTGGAGGGCTTTGTAAAGTTGGAGAGTTTCCATCAATAAAGCAAATAGGCGGACTTGAGGGAAAAGCCACAACTATTCTTGCATTGGTGGCAATGATTGTTGGATATCGTCTTATTGCTTATATTGCTTTAATGAGGATTGGTGTCACCAAGCAAAAGTAGAAAATCTTGATAGTTTTTTTTTTTTTTTTTTTTTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTATTGATGGAAGTAGTGATTATTAAAGCTTAATTTTCAAAAACTAAATACCTAAAATAAAATGATTATCAAACGAAATTTTGAATCTACCTATTGGAAGAAAATAAGTTTCTTAGAAGTAGTTATTATTGGAAGAAAACTTTTCAATGACACGTAATAAATGTTAGGAATTCCTTATCGTGCTACTTGGTGATTTTGTGACTTAACGATTACAGATTAGGTTTAAATCTATAGCAATTGATCATATAGACTCAACTAGTTTGTCAGACATATTCAAGAAAATACAATCATGAAGATTTAGCAAGATGAGAATCCAAAGATAAGATAAAAATTAGATGAAGTGAGCAAAACTCTCACAAGGTTACGTCAATGGAGAAAATCGTCTAAAACCCAAGCTAGTACTTACTTTTTTTAGCCCATAGAGGTCTTCATAATCAATAGAGAATAGAAAAAAATGCATTAATACAAGCTAAATTGAAAAAGAATAGAAGAAAAAGGTGAAAGTGTAGTGGGGGAATCGAGAAAAACTGAACAATGCATGATCTAGGTGGCTTAAAACATATATATAGGTTTGGCGCTGTAGCGCTGCCCGCAATGCTGCATCTCTATGGGCTTTCAATCAGAGCATTTTCGCGCATACAAACTTCCCCTATCATGACGTTGTTGCGGAGCCACAGGGCAGAGCTTTCATCATCTCCAGTCCCTGTGAACAGCGTCGCGTGCAAGGGTGCTGCAGCACCCACCAAATGA

mRNA sequence

ATGTACAAGCTTTCATCCTACTTCATATCAAAAACAGTGGATGACCTGCCCTTGGAGCTGGCTCTTCCCACTCTTTTCACTCTCATAGTGTATTGGATGGCAGGCTTAAAACCAACTCTTGCACATTTCTTGGCCACTTTGTTTACCATTCTCCTCAATGTTTTGGCGTTTCAAGGCTTTGGCTTTGCCATTGGCACACTTAACATGGACCAAACTGCAGCCACTAATGTGCCTGAGTTTATAGCTTGGGTTAAGTATATTTCTATTGGTCATTTTACGTACAAGCTTATGTTGATCTCTCAGTACAAAGCTGATGATACTTATCCATGTTCTATCTCTGGAGGGCTTTGTAAAGTTGGAGAGTTTCCATCAATAAAGCAAATAGGCGGACTTGAGGGAAAAGCCACAACTATTCTTGCATTGGTGGCAATGATTGTTGGATATCGTCTTATTGCTTATATTGCTTTAATGAGGATTGGTGTCACCAAGCAAAAGTTTGGCGCTGTAGCGCTGCCCGCAATGCTGCATCTCTATGGGCTTTCAATCAGAGCATTTTCGCGCATACAAACTTCCCCTATCATGACGTTGTTGCGGAGCCACAGGGCAGAGCTTTCATCATCTCCAGTCCCTGTGAACAGCGTCGCGTGCAAGGGTGCTGCAGCACCCACCAAATGA

Coding sequence (CDS)

ATGTACAAGCTTTCATCCTACTTCATATCAAAAACAGTGGATGACCTGCCCTTGGAGCTGGCTCTTCCCACTCTTTTCACTCTCATAGTGTATTGGATGGCAGGCTTAAAACCAACTCTTGCACATTTCTTGGCCACTTTGTTTACCATTCTCCTCAATGTTTTGGCGTTTCAAGGCTTTGGCTTTGCCATTGGCACACTTAACATGGACCAAACTGCAGCCACTAATGTGCCTGAGTTTATAGCTTGGGTTAAGTATATTTCTATTGGTCATTTTACGTACAAGCTTATGTTGATCTCTCAGTACAAAGCTGATGATACTTATCCATGTTCTATCTCTGGAGGGCTTTGTAAAGTTGGAGAGTTTCCATCAATAAAGCAAATAGGCGGACTTGAGGGAAAAGCCACAACTATTCTTGCATTGGTGGCAATGATTGTTGGATATCGTCTTATTGCTTATATTGCTTTAATGAGGATTGGTGTCACCAAGCAAAAGTTTGGCGCTGTAGCGCTGCCCGCAATGCTGCATCTCTATGGGCTTTCAATCAGAGCATTTTCGCGCATACAAACTTCCCCTATCATGACGTTGTTGCGGAGCCACAGGGCAGAGCTTTCATCATCTCCAGTCCCTGTGAACAGCGTCGCGTGCAAGGGTGCTGCAGCACCCACCAAATGA

Protein sequence

MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGFGFAIGTLNMDQTAATNVPEFIAWVKYISIGHFTYKLMLISQYKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGVTKQKFGAVALPAMLHLYGLSIRAFSRIQTSPIMTLLRSHRAELSSSPVPVNSVACKGAAAPTK

Homology

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot
Match: Q9SZR9 (ABC transporter G family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCG9 PE=1 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 8.3e-40
Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS YF+S+ V DLP+EL LPT F +I YWMAGL   LA+F  TL  +L++VL   G 
Sbjct: 455 MYRLSPYFLSRVVGDLPMELILPTCFLVITYWMAGLNHNLANFFVTLLVLLVHVLVSGGL 514

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A+G L MDQ +AT                   +VP FI+W+KY+SIG++TYKL+++ Q
Sbjct: 515 GLALGALVMDQKSATTLGSVIMLTFLLAGGYYVQHVPVFISWIKYVSIGYYTYKLLILGQ 574

Query: 121 YKADDTYPCSISGGL-CKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIG 164
           Y A++ YPC  +G L C VG+F  IK IG   G   + LAL AM+V YR+IAYIAL RIG
Sbjct: 575 YTANELYPCGDNGKLRCHVGDFEGIKHIGFNSG-LVSALALTAMLVVYRVIAYIALTRIG 634

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot
Match: Q9C6W5 (ABC transporter G family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCG14 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.8e-33
Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LSSYF+++ V DLPLELALPT F  I+YWM GLKP    F+ +L  +L +VL  QG 
Sbjct: 470 MYRLSSYFMARNVGDLPLELALPTAFVFIIYWMGGLKPDPTTFILSLLVVLYSVLVAQGL 529

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A G L M+   AT                    +P FI W+KY+S  ++ YKL+L  Q
Sbjct: 530 GLAFGALLMNIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQ 589

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRI 160
           Y  DD Y CS  G  C+VG+FP+IK + GL      +  +  M+VGYRL+AY+AL R+
Sbjct: 590 YTDDDYYECS-KGVWCRVGDFPAIKSM-GLNNLWIDVFVMGVMLVGYRLMAYMALHRV 645

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot
Match: Q7XA72 (ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           +Y+LSSY+I++TV DLP+EL LPT+F  I YWM GLKP+L  F+ TL  +L NVL  QG 
Sbjct: 497 IYRLSSYYIARTVGDLPMELILPTIFVTITYWMGGLKPSLTTFIMTLMIVLYNVLVAQGV 556

Query: 61  GFAIGTLNMD-QTAAT------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A+G + MD + AAT                  ++P FIAW+KY+S  H+ YKL++  Q
Sbjct: 557 GLALGAILMDAKKAATLSSVLMLVFLLAGGYYIQHIPGFIAWLKYVSFSHYCYKLLVGVQ 616

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRI 160
           Y  D+ Y C  SG  C V ++  IK +  +      +LAL  M++ YR++AY+AL  +
Sbjct: 617 YTWDEVYECG-SGLHCSVMDYEGIKNL-RIGNMMWDVLALAVMLLLYRVLAYLALRNL 672

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot
Match: Q93YS4 (ABC transporter G family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS+YF+++T  DLPL+  LP+LF L+VY+M GL+ +   F  ++ T+ L ++A QG 
Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGL 646

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G AIG + MD   AT                    VP FI+W++Y+S  + TYKL+L  Q
Sbjct: 647 GLAIGAILMDLKKATTLASVTVMTFMLAGGFFVKKVPVFISWIRYLSFNYHTYKLLLKVQ 706

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 162
           Y+    +  SI+G                ++   T + ALV MI GYRL+AY++L ++ +
Sbjct: 707 YQ---DFAVSING--------------MRIDNGLTEVAALVVMIFGYRLLAYLSLRQMKI 749

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot
Match: Q9FT51 (ABC transporter G family member 27 OS=Arabidopsis thaliana OX=3702 GN=ABCG27 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS+YF+++T  DLPL+L LP LF ++VY+MAGL+     F  ++ T+ L ++A QG 
Sbjct: 571 MYRLSAYFVARTTSDLPLDLILPVLFLVVVYFMAGLRLRAESFFLSVLTVFLCIVAAQGL 630

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G AIG   MD   AT                    VP FIAW++++S  + TYKL++  Q
Sbjct: 631 GLAIGASLMDLKKATTLASVTVMTFMLAGGYFVKKVPFFIAWIRFMSFNYHTYKLLVKVQ 690

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGG--LEGKATTILALVAMIVGYRLIAYIALMRI 160
           Y+                     ++ + G  +E     + ALVAMI+GYRL+AY +L R+
Sbjct: 691 YE-------------------EIMESVNGEEIESGLKEVSALVAMIIGYRLVAYFSLRRM 731

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL
Match: A0A0A0L5B4 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G102320 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.2e-61
Identity = 128/184 (69.57%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPTL +F ATLFT+LLNVL  QGF
Sbjct: 427 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTLPNFFATLFTLLLNVLVCQGF 486

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G + MDQT A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 487 GFALGAVLMDQTVASISGTVLALAFLLTSGFFVQHVPKFIAWIKYLSSGHFSYKLMLISQ 546

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IKQI GLEGKA T+LALV M VGYR IAY+ALMRIGV
Sbjct: 547 FKGDDTYPCSNIGGVCKVGEFPVIKQI-GLEGKAMTVLALVVMFVGYRFIAYVALMRIGV 606

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL
Match: A0A5A7V487 (ABC transporter G family member 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005860 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.9e-59
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 374 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 433

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 434 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 493

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 494 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 553

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL
Match: A0A5D3BZ08 (ABC transporter G family member 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001540 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.9e-59
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 374 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 433

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 434 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 493

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 494 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 553

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL
Match: A0A1S3BUL4 (LOW QUALITY PROTEIN: ABC transporter G family member 9-like OS=Cucumis melo OX=3656 GN=LOC103493345 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.9e-59
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 447 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 506

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 507 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 566

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 567 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 626

[Close]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL
Match: A0A6J1CP45 (ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC111012811 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 3.5e-57
Identity = 118/183 (64.48%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LSSYFIS+T +DLP+EL LPT+F LIVYWMAGLKP+ A+F ATLFT+LL+V   QG 
Sbjct: 161 MYRLSSYFISRTTNDLPMELFLPTIFILIVYWMAGLKPSAANFFATLFTLLLSVFVTQGL 220

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFAIG + +DQT+AT                   +VP FIAW+KY+SIG FTYKL+L+SQ
Sbjct: 221 GFAIGAVVLDQTSATTLGSVLMLSFLLASGYFVQHVPHFIAWIKYLSIGQFTYKLLLLSQ 280

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 165
           ++ADDTYPCS  GG+CKVG+FP+IKQ+ GL GKATT+L LV M+VGYRL+AYIALMRIGV
Sbjct: 281 FEADDTYPCSRLGGVCKVGDFPAIKQM-GLRGKATTVLGLVVMLVGYRLVAYIALMRIGV 340

[Close]

BLAST of Lsi05G007050.1 vs. NCBI nr
Match: XP_038906086.1 (ABC transporter G family member 9-like [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 1.7e-66
Identity = 136/183 (74.32%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LSSYF+SK+ +DLP+ELALPT+FTLIVYWM GLKPTL HFLATLFTILLNVLAFQGF
Sbjct: 445 MYRLSSYFMSKSANDLPMELALPTIFTLIVYWMTGLKPTLPHFLATLFTILLNVLAFQGF 504

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQTAAT                   NVP+F AW+KY+SIGHFTYKL+LISQ
Sbjct: 505 GFALGALIMDQTAATILGSVLALAFVLTSGFFVQNVPQFFAWIKYLSIGHFTYKLLLISQ 564

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 165
           +KADDTYPC   GGLCKVGEFP+IKQI GLEGKATT+LALV M+VGYRLIAYIAL+RIGV
Sbjct: 565 FKADDTYPCPKFGGLCKVGEFPNIKQI-GLEGKATTVLALVVMLVGYRLIAYIALLRIGV 624

[Close]

BLAST of Lsi05G007050.1 vs. NCBI nr
Match: XP_004134252.1 (ABC transporter G family member 9 [Cucumis sativus] >KAE8650174.1 hypothetical protein Csa_011561 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 128/184 (69.57%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPTL +F ATLFT+LLNVL  QGF
Sbjct: 446 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTLPNFFATLFTLLLNVLVCQGF 505

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G + MDQT A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 506 GFALGAVLMDQTVASISGTVLALAFLLTSGFFVQHVPKFIAWIKYLSSGHFSYKLMLISQ 565

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IKQI GLEGKA T+LALV M VGYR IAY+ALMRIGV
Sbjct: 566 FKGDDTYPCSNIGGVCKVGEFPVIKQI-GLEGKAMTVLALVVMFVGYRFIAYVALMRIGV 625

[Close]

BLAST of Lsi05G007050.1 vs. NCBI nr
Match: XP_008452272.1 (PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 9-like [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-58
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 447 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 506

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 507 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 566

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 567 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 626

[Close]

BLAST of Lsi05G007050.1 vs. NCBI nr
Match: KAA0060685.1 (ABC transporter G family member 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-58
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 374 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 433

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 434 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 493

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 494 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 553

[Close]

BLAST of Lsi05G007050.1 vs. NCBI nr
Match: TYK03309.1 (ABC transporter G family member 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-58
Identity = 124/184 (67.39%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MYKLSSYFISKTV+DLP+ELALPTLF LIVYWM GLKPT  +F +TLFT+LLNVL  QG 
Sbjct: 374 MYKLSSYFISKTVNDLPMELALPTLFILIVYWMTGLKPTFPNFFSTLFTVLLNVLVCQGL 433

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           GFA+G L MDQT+A+                   +VP+FIAW+KY+S GHF+YKLMLISQ
Sbjct: 434 GFALGALIMDQTSASIFGSVLALAFLLTSGFFVQHVPKFIAWIKYVSSGHFSYKLMLISQ 493

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 166
           +K DDTYPCS  GG+CKVGEFP IK+I GLEGKA T+L LV M V YR IAY+ALMRIGV
Sbjct: 494 FKGDDTYPCSNIGGVCKVGEFPVIKEI-GLEGKAMTVLVLVVMFVVYRFIAYVALMRIGV 553

[Close]

BLAST of Lsi05G007050.1 vs. TAIR 10
Match: AT4G27420.1 (ABC-2 type transporter family protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-41
Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS YF+S+ V DLP+EL LPT F +I YWMAGL   LA+F  TL  +L++VL   G 
Sbjct: 455 MYRLSPYFLSRVVGDLPMELILPTCFLVITYWMAGLNHNLANFFVTLLVLLVHVLVSGGL 514

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A+G L MDQ +AT                   +VP FI+W+KY+SIG++TYKL+++ Q
Sbjct: 515 GLALGALVMDQKSATTLGSVIMLTFLLAGGYYVQHVPVFISWIKYVSIGYYTYKLLILGQ 574

Query: 121 YKADDTYPCSISGGL-CKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIG 164
           Y A++ YPC  +G L C VG+F  IK IG   G   + LAL AM+V YR+IAYIAL RIG
Sbjct: 575 YTANELYPCGDNGKLRCHVGDFEGIKHIGFNSG-LVSALALTAMLVVYRVIAYIALTRIG 634

[Close]

BLAST of Lsi05G007050.1 vs. TAIR 10
Match: AT1G31770.1 (ATP-binding cassette 14 )

HSP 1 Score: 142.5 bits (358), Expect = 4.1e-34
Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LSSYF+++ V DLPLELALPT F  I+YWM GLKP    F+ +L  +L +VL  QG 
Sbjct: 470 MYRLSSYFMARNVGDLPLELALPTAFVFIIYWMGGLKPDPTTFILSLLVVLYSVLVAQGL 529

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A G L M+   AT                    +P FI W+KY+S  ++ YKL+L  Q
Sbjct: 530 GLAFGALLMNIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQ 589

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRI 160
           Y  DD Y CS  G  C+VG+FP+IK + GL      +  +  M+VGYRL+AY+AL R+
Sbjct: 590 YTDDDYYECS-KGVWCRVGDFPAIKSM-GLNNLWIDVFVMGVMLVGYRLMAYMALHRV 645

[Close]

BLAST of Lsi05G007050.1 vs. TAIR 10
Match: AT3G25620.2 (ABC-2 type transporter family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           +Y+LSSY+I++TV DLP+EL LPT+F  I YWM GLKP+L  F+ TL  +L NVL  QG 
Sbjct: 497 IYRLSSYYIARTVGDLPMELILPTIFVTITYWMGGLKPSLTTFIMTLMIVLYNVLVAQGV 556

Query: 61  GFAIGTLNMD-QTAAT------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G A+G + MD + AAT                  ++P FIAW+KY+S  H+ YKL++  Q
Sbjct: 557 GLALGAILMDAKKAATLSSVLMLVFLLAGGYYIQHIPGFIAWLKYVSFSHYCYKLLVGVQ 616

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRI 160
           Y  D+ Y C  SG  C V ++  IK +  +      +LAL  M++ YR++AY+AL  +
Sbjct: 617 YTWDEVYECG-SGLHCSVMDYEGIKNL-RIGNMMWDVLALAVMLLLYRVLAYLALRNL 672

[Close]

BLAST of Lsi05G007050.1 vs. TAIR 10
Match: AT5G06530.2 (ABC-2 type transporter family protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS+YF+++T  DLPL+  LP+LF L+VY+M GL+ +   F  ++ T+ L ++A QG 
Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGL 646

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G AIG + MD   AT                    VP FI+W++Y+S  + TYKL+L  Q
Sbjct: 647 GLAIGAILMDLKKATTLASVTVMTFMLAGGFFVKKVPVFISWIRYLSFNYHTYKLLLKVQ 706

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 162
           Y+    +  SI+G                ++   T + ALV MI GYRL+AY++L ++ +
Sbjct: 707 YQ---DFAVSING--------------MRIDNGLTEVAALVVMIFGYRLLAYLSLRQMKI 749

[Close]

BLAST of Lsi05G007050.1 vs. TAIR 10
Match: AT5G06530.1 (ABC-2 type transporter family protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 1   MYKLSSYFISKTVDDLPLELALPTLFTLIVYWMAGLKPTLAHFLATLFTILLNVLAFQGF 60
           MY+LS+YF+++T  DLPL+  LP+LF L+VY+M GL+ +   F  ++ T+ L ++A QG 
Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGL 646

Query: 61  GFAIGTLNMDQTAAT-------------------NVPEFIAWVKYISIGHFTYKLMLISQ 120
           G AIG + MD   AT                    VP FI+W++Y+S  + TYKL+L  Q
Sbjct: 647 GLAIGAILMDLKKATTLASVTVMTFMLAGGFFVKKVPVFISWIRYLSFNYHTYKLLLKVQ 706

Query: 121 YKADDTYPCSISGGLCKVGEFPSIKQIGGLEGKATTILALVAMIVGYRLIAYIALMRIGV 162
           Y+    +  SI+G                ++   T + ALV MI GYRL+AY++L ++ +
Sbjct: 707 YQ---DFAVSING--------------MRIDNGLTEVAALVVMIFGYRLLAYLSLRQMKI 749

The following BLAST results are available for this feature:

BLAST of Lsi05G007050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZR9	8.3e-40	50.27	ABC transporter G family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCG9 PE=1 ...	[more]
Q9C6W5	5.8e-33	44.94	ABC transporter G family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCG14 PE=...	[more]
Q7XA72	2.0e-30	42.70	ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=...	[more]
Q93YS4	7.8e-22	36.11	ABC transporter G family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCG22 PE=...	[more]
Q9FT51	2.3e-21	36.11	ABC transporter G family member 27 OS=Arabidopsis thaliana OX=3702 GN=ABCG27 PE=...	[more]

BLAST of Lsi05G007050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5B4	5.2e-61	69.57	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G10...	[more]
A0A5A7V487	4.9e-59	67.39	ABC transporter G family member 9-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3BZ08	4.9e-59	67.39	ABC transporter G family member 9-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BUL4	4.9e-59	67.39	LOW QUALITY PROTEIN: ABC transporter G family member 9-like OS=Cucumis melo OX=3...	[more]
A0A6J1CP45	3.5e-57	64.48	ABC transporter G family member 9-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi05G007050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906086.1	1.7e-66	74.32	ABC transporter G family member 9-like [Benincasa hispida]	[more]
XP_004134252.1	1.1e-60	69.57	ABC transporter G family member 9 [Cucumis sativus] >KAE8650174.1 hypothetical p...	[more]
XP_008452272.1	1.0e-58	67.39	PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 9-like [Cucumis ...	[more]
KAA0060685.1	1.0e-58	67.39	ABC transporter G family member 9-like [Cucumis melo var. makuwa]	[more]
TYK03309.1	1.0e-58	67.39	ABC transporter G family member 9-like [Cucumis melo var. makuwa]	[more]

BLAST of Lsi05G007050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27420.1	5.9e-41	50.27	ABC-2 type transporter family protein	[more]
AT1G31770.1	4.1e-34	44.94	ATP-binding cassette 14	[more]
AT3G25620.2	1.5e-31	42.70	ABC-2 type transporter family protein	[more]
AT5G06530.2	5.5e-23	36.11	ABC-2 type transporter family protein	[more]
AT5G06530.1	5.5e-23	36.11	ABC-2 type transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013525	ABC-2 type transporter	PFAM	PF01061	ABC2_membrane	coord: 1..82 e-value: 7.0E-14 score: 51.7
None	No IPR available	PANTHER	PTHR48041:SF18	ABC TRANSPORTER G FAMILY MEMBER 21	coord: 76..160
None	No IPR available	PANTHER	PTHR48041	ABC TRANSPORTER G FAMILY MEMBER 28	coord: 76..160
None	No IPR available	PANTHER	PTHR48041	ABC TRANSPORTER G FAMILY MEMBER 28	coord: 1..75
None	No IPR available	PANTHER	PTHR48041:SF18	ABC TRANSPORTER G FAMILY MEMBER 21	coord: 1..75

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G007050	Lsi05G007050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G007050.1.exon.3	Lsi05G007050.1.exon.3	exon
Lsi05G007050.1.exon.2	Lsi05G007050.1.exon.2	exon
Lsi05G007050.1.exon.1	Lsi05G007050.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G007050.1.CDS.3	Lsi05G007050.1.CDS.3	CDS
Lsi05G007050.1.CDS.2	Lsi05G007050.1.CDS.2	CDS
Lsi05G007050.1.CDS.1	Lsi05G007050.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G007050.1	Lsi05G007050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0000166	nucleotide binding