Lsi04G022910.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G022910.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MADS-box transcription factor 23-like isoform X1
Location	chr04: 30056403 .. 30076240 (+)
Sequence length	1845
RNA-Seq Expression	Lsi04G022910.1
Synteny	Lsi04G022910.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAGATCCCTTTCCATAAATGGCGCTGTGCAGCTAAATGATGTGAATCCGCTTCAGTACAACGCTCCGTAGAAAAGCGCTGATTCTGTTTGATCTCACTTTGCCTTGACTCCAAACCGGCACCGCACTCATCCGCAAAGAGTAAGTTACGATTTCCTGGAAAATTCCTTCGCATTTTCTCTTTCGTTCTTCAATGATTGCTTTGGCTTTTTTTTTCTTTTTTTATGTTCGTCGATTTTCATTTGTTTTCGGACAGTTTTCTTCTGCTTTTTTTTGGATCGCACACAGTAAATTTGTATCTATATCATTCATGTGCTTTATCGAGGAAGAACGAACTGCATAGAGTTTTTTTTTTCCTTTCATAGATTTGGTTACGATTTTCTTTTTGTTTCTTTGTTACTTGTGAAATTTACTGTGCTTTTGTTATTTTTTGTAACTTTCTGCGGAAAAATGAACAGAAGAAACGAGTTGCGGATCTAAGTATGGGGAGAGGCAAGATTGTAATTAGGAGGATCGATAATTCGACGAGCAGACAGGTGACTTTCTCGAAGCGCAGGAGCGGACTGCTGAAGAAGGCGAAAGAACTAGCGATCCTTTGTGACGCCGATGTTGGAGTCATCATCTTCTCCAGCACCAGCAAGCTCTATGAATACTCCAGCACCAGGTTCTATGATATTCGTCTTCTGTTTCTTCTACTATTTGCCTTTATTTTCTTCTACTTTTCTTTTTTCAGTCTGAATAATTGCTCCGTTTCCGTACTTATTTATAATAGATTAATATCTAGTGCGACAAGACATTGGTAGCATCGCTCTACTTAATTTAACTGATTTTTATTCATTCTATTGGCGAGCGTGCACCTTAAATCACGATTAAGACTCTATGCTTTATCGTATAAAATAAAATTTTGTGCACACTGACAAATAGAAATTTCTGAGCCATACAGTCTTCAGGTTTCAGGTCGGTCTTTGTTTTATTTTGTGATTTTATGAGGATCATCAGTTCTGTCATTTGCCTGAGCTCTCTACCGCTGAAACTTCGGTCGTTTCAGCATTAGAGTTATTATTGGCTGTCAAGTGTTAGACACTACTAGTTTATGCCTTTAGGATGGACGGCTATAATACTAATTTGTTGCTAAGCGACAATCTCGCCCTAGAATATCGTACGTGACTTGTGATGACAATAAAAGTGTTGCAACATAATTCGGAGAGGTATACATTGTGACTTATCCGAATAGAAAGTTGCAACTCCGTCTGGAAACATAGTTAGATCATGCAAGAAAATACGTACATTCTCTTAAAAGTAGTGAGTACATTATCTCGATCGATTTAGATGAAGATCGTGCACGATACTGGAAGATGGATAACCAGATCGTTAATTTACAATCATTTTCATTGTAATGGACGCCAACCGAGTGTATTTGCATTAACAATGGTTGGAAAAGCGGATTTCTGTGCTGTTTTTAGTTGAGTTGTGATCTGCACAGACTAATTGATCAGTCAATGTAGCTAGTAGTTCATTCTAGGCCTCTTGAATTGGATAGAATAATATGGTCAACACAGTACATTATTTCATTTATAACTGTAATTCGACTCAAAATTATTTCTAAACTCATCCATTTGAGTTTAATTAAGGACCAGATCTTATATTAGTTACGGAGTGTAGAAATAAAAGAAGGCTTAGTTGCTGACCTCAACATTCATAACTACATATGTAGGGTTATACATTCATACCTCCTTCTGTAGGTTCAAATTACTTATATTCCACATTCTTAATTTATATTCTAAGAACAAAGAAGCATGGTTCGAGCAATAGCTATAAGTCCCCAAGGATTACCACTTTTATGAAATTGGATAAAGTATGGACAGAAGTTGGTCGGGCTGTCTCATATAGCTTGCATGTTGTGTGTAATTGTGCCTTCCTTGGGGTGAGGAACGATTCGAGTAAGAATTTGGAACCTTAATATACTATGGTTGGCCATTAAGTTGGACCACTTAAATATATATATATTTTTTGTATCCGTGAGTGTCTCAGTAGCTTACGCGCACCTTGTAAGTAGGTGACCACGATGAATTGAACCCATGACCTCTTAGCTTTTTATCAATGTCATGTCTCCTATTTACCACTAAGCCAACCCAGAGTGGTTACCGTTTTCATAAGTTAATTTTATTTAGTATTGGTTTTTAAACATCTTCATTTAGTACATACTGTAGTCTAAATTTCACTTGAATAAAGCTCTTGTTTGTTTTTTTTTTTTTTTTTAAATGATTACAAGCTTTCATACATATACTGAAGTAATATATTTCGTTTAAAGCTACAGTAATGTTATTAAGGTCTATTATAGCTGATAATGTTTATAAACTTCTATCTATTTCAATAGGAAATTAATTGTTTGCTTTCTATTTCTGTTTTAATGTAACTTAGAGAAAAAAACTTGTTGTTATAAGAGAAAAATAAATGTATATATGTGTGTAAAGGAATAGGAAAATCTCTTAAAATTTGCATATATGAAGAAGTTTCAATCGAGTACTCCTACAACACAGAAATCCCTGGCTAAGCACTACACTCATGTTTTACTTTGAATCCCACTTGGCCTCATTGAAACCCGATCGAACTCAATTGATCAAGAAGATGGACACATAATGTTAAGGTATTACCTTTTCCGTCCTTCCTTAAGTGCCGTTTTAAGCATTAAGTTGGCGTTCAATTCTTTTGCAAGATCGTGTTAGTCGTCAGCCTGAATCCTTGTGAACCATCATCTCTCTTATTGGGAAGGACTTCAATCCAATCATCCTTCATGAGCCAGTTCTCACTAATTTAGCAAGTCTAGTTAAAAAAGTTATTATAGGATTTAAATCTTAAAGTAATTATCTAGCTAAGTGATTTGAATTCATTAGTTCTTTATTTTATTCTCCAATAACGACTTAAGTCAACTTAAGATTATTATTAGATCCATATAAAAATGATAAATAATAGATTATCGATACTTTCCTCGAGTAAAGATATTTGAACCATAAGGTTCATATTCTTAATTATTCATTAGCGCAAGGTTCATATATTCTTATTGAGCATCTTTAAAAGCTTAATGATAGATGGGAAGGTTCCTTCCTGGGAAGGTTGATATTTTTTTTTGATAGCTTCCTAGGGGAGGTTGTTGAGAGGGATCATCCTTCCAACTTGATTCGCTTAGAAAATCAGATCTATACGAGGTTGGAGGAGAGAGAAAGGTTGAAGGGATAGTTGGAAAAATAAAAAAACTAAAATGTTGACTAATGAGCTGTCAAATATACTTTCCAGCTTCCACAAAAAAGTTTGGCTACATGTGCAAAATTTTAATCAAAATTTCGGATTGTTTTTTTTTCCTTTTAAAGAAGGATGGATTATAATCATCAAAATTTCAATCTATGGTGGTCACCTACCTAAGAATTAATTTTTTAAAAATTTTCTTGACACCCAAATGTTGTAGGGTCAGGTGAGTTGTCTCCTAAAATTAGTCGAGTTGCGCGTAAGTTGGCCCGAACACACACAGATATGAAAAAATAATAATAATAATAAAGAAGGATGGATTATAGATTGGTCAATGTCCAAACTATATATATATTTGAAATTTAACCATAATTTTTTTTAAAAAATGAAATCTTATAAATATTAGAAATAAATAAAAATTTTAAATCATACCAATCTCCATCACCTTCACCACCCCGTTTATCTCATTTAGGATTTCCACAAGTCTACTCAGAATTAGTTATTTTATTAGATAAAACAGTAAACTTATCTCTGACACACAATTTTACGTTTGCTTTGAGATTTGAAAGATGTACTATTCTTTTAGTAAAAGCTATAAGACGTAGAAGAGTATCAAACTTGAGAACAATTAAGAATGTTTTGGGCAAATGAATAATATTTCTAATAAGAATGATAGAAGAACACACAGTAAGTTGCAAGTCTAGATATTAATATTTGGAGAATAGTGACGGCATATTAGTACTAGTGAAACTACACACGGATTTATTTATTTATTTTCATAAAGGGACTGAGAACTTTTGAGAGTAATGTTTTAAAGAGAATCTTAAAAAATGGTAAAATAAAAAGTAGGAACTTTTTAATATGTCTGGGATAATACAGATAAAAATGGTTAAACTACAAAGTTTAGCCTCAAAACTAAATTTGTGTTTATGTTTAATATATCAATGATAGATTAGGTATAAAGTTACATTTTACATCTATAACTTTATGCTTAATAAGTATATGAATTCTAAAAAAATATTAAATTAGATTAAAGATCCGTTCCATATAAAATTGAAAATTTTAAAAATTTATTGAACACAATAGTAAAAATTCAATGACCTTTTAGGGTTGTTTGGAGGCGTTGAGTTAGTATTGTGGTTAGTGACTATTGTAGTCTATAGGTCATAATAGTTGTTGAGAGTCTATACTATTGTAGTTTGAGTTGAAATAATCTATGTTAGCGTGTAAACTATTTTAGTTTGAGTTAGAATGATCTAATGCAGACTATTTTAGTGAAAAAAAGATGGTTACTGAATAGTAAACATGGTAGATGATGAAGATTTTCAAATAGTTTCATTGTAGTAAGTAAGTTAAAAATTCAATTATTATAATGGGAGGCCTAAACATTGAGTGGGCTATCCACCTCGAGCAAGTTGAAACCCCTTACATATTTTTTTTTAAGTTAATCAAATATACACAAACATAAAAACTTAAGACCTATCAAACATTTTTAAAAAAAATTAATAACCAAAGAAACACAATTTGAAACTTTATGAACCAATAAAAATAGGGTGTTATTGTTATAATAATATGTTTTAAAGTTTACAAGAAATAACAAGATATAAACCAAAACGAACCTAGTTTAATTAGTATATGAGTGTGTTAGTAACCACAAATTTTGTGGTTCGAACCCTCCAATTCTCAATTGTACTAAACAAAGAAAAGAAGAAAGAAATAACAAGACATAAAACGGTAGAAGCTCATAATTAAATTGCCTCTCTTTTGTCCAGCTTTTTTTTTTTTTTTTTTTTTTGTAAAATTATAAGGCCAAGGACGTATTAAAAAATTTATTTTTTACTACATTACTTGATGTGCATTCTATTTTCTTCGGTGCATGTGCACTTTAAAAATAATTAATAAACTTTAAAAGTAATATTAGTTTTATTGTCAAATATCACGAGAACGTTATAAAATATTTTAAATAAGCCAACCTAAAATCCCCTATATCTTCCGGTCAATTTGAACGTATTTTGACGGAGATTGAAAAATTAAATAATTAAATAGAGAAGATCATTCAGAAGATTGGATAACTCTTTTAAATTTCAACTTGGCATTCAGTACTAAAAAAGTGCTGTCACATCCTCCTTCATAACTAAACAAAAGTTCTAGTACTACGATTCACATTACAATTTTGCACTCATAGATATCTGCTAATGATAGTAAACTCCACCTCATTATAAAAAAAAAAATACTGACTTAACAGCCAAGTAATGAGATTGGTACCCATACTACAATAAGTATATAAAAAAGAATCCCCTTAGTTTCTCTCTTCTTATTGTTTATTCCTTTTTCTGCCAACAGGATTCCTCCCAAATTCTCAATCTCCACTTCATTAACATCCTATCTTTAAGGAAAATAGGCATTAGAATTCTGTAAAGGGACCAAAGTGATGCCAGAGAGATTGTTCTATTTCTAATAAACATTCTAGCATTAATTTATATTAATTCGAACTTCTAGACCCGAACATGATTTTAACATCTAATTCATCCTCGATTCACGAAGTCCTCCAAGTCCTCCGATCAACAAATCTGGTGACGTAATTGGAGTTTGACAGTATTGCACACACTTACAGTAGTTTAATTGCTAGTATGGTCACACTTGCAGTGGTCACCAATAGAAATTAAGATAAGTAATGTCGCTACATTTGTTCTTTTTAATTTAATATGTATTACTCCTTTTAGTAAAAGATAACACTAAGATGATGTTTGAAAGTAATTTTTAGATATTGGTTTCTAATTGATAGAATAATAAAAGGGTCAAAGATTAGCAACCATAATGATAATTCTCTTTTTTTTGTTCTCCCCATAATTCTTCATAGCTCACTTTTGGGAAGAACTAAACCTATTCTCCAAACCCTTAACCCTTTAGCATTCATAAAAGATATTTGAAAATGATTCAGAAAAATATATATTATTATATATTATAAAAAAGAAAAAAGAAAAAGAAAACCTTTCTTCTAAAGGAAACAGAGAAGAGAGACCAAAAACCAATTGCTGAATTGAATGAACAAAAGTAGATTGTCTGTCCTAGTCCCTGGATGATACAAAAGGACGACGTGAAGAGAAAAAGCCATTTGAAACCACTTCTCTTTTCAATACAGCTTCCTAAAGTCATAGCCAGTAATAGTATCTATAATACATGGTTTCACTCTTCCCCTTTGTAGCGGCTATTCTAAAGCACATCATAACAGAACAGCTACTGAATTGGAATGGCTGGTCGGGAAGTGCTGAAGAAATGGGTGCACATGCTCCACAAATTTATGATGTAAAAGAACATAAAAACATTCGATGTTTTATGTTTTAGGCTATGACAGTGTCACTGTGTGTTCTGAGTTTCATATTTTAGATGTCTGCATTAGAAGCTTATACAATTACTAATGCCGATATAAACCCTTCCTGCTGTTCATATGAAATACAATAATACTTTTTCTTTTCCTACTCTTTAACTGAACCTAAATCCCCATTCATAACTTTACTTTTGGTTTTGTTTTTGTTTTTCTGGAATTTTTTATTTATTGTTTGTTTGTAGTTTTGTTTTGTCTTCTTTGTTTTTAGTTTTACAAAAATAGAAGGTATAGATATTAAATGACTACATTTGAAAAACAAAATAAGATATTTAAGCTCGGTTTTGAAATTAATGTTTGTTTCCCCACAATTTTGGTTTTTCTTTCATAGAGAAAAATATGAATTCTTTGTCAAATTTAAAAAACCAAAAACAAAATTTTTAAAACTACTTTTCTTGGCTAAATTTGATGACAATTTTCATTTTTACTTTTGTTTTTTTAAATTTAGGCATGTTTCTTCTCAATATTCTAATCTACAAGTACAAATAGTGTTTATAAGCTTAATTTTCAAAAATCAAATGGTTATCAAATGGAACTCTAGTTTTAAAACTAAATTGAATTTCAAAAGTATATGTTAAAAGTAGGTAACAAAACAGAAATTCATAAGTAGAAGTAATGCTTATATGCTTACTTCTCAAAAACTAAGAATCCTTGGTTTTGTAGAAAAAGTTAGGGAAAATGAGAGATGTTAAGATATAGTGATATGTTAGAGAGGAATAAAAGTTGGAGAAATTTAAGCGACTTATCAAGTAAAGAATAGCTAGAAGAATAAAAAAATTAAGAAAGAGATAAACTAGAATGAAAAAAAATTATAGAGAGAAATACGCATACATATTGAAGGGAAAAAGGAAAAAAAAGACGGAGATATTTAGGATAAGACAGCGAAACCGAACTCAGACAGAAAGAAAGTTAAGAAAGATTTAGAGGGGGGAAAAGAAAAGTTATGAAAAAAAAAAAGCAAAGAATTAGAGATTAAGGTGAGCAGGAGAAAAAAAATGAAAAACATATCAAAAGAGACTGTTTACGAAAACTTATTTTATTTTTGTTTAAAATTTAATTTACAATTTTAAAAACATTTTTCAGATTGTAAAGTTGAGAATCAAACAACTTTTTTTAGAAAAGAAAATCAAAAACCAAAACCTAAGAAAAAAACACGATAACAATCAAGTTATTATGGCAGATCATGAAAATAAGAAATAAAATATAAAACATTAATTCATCCTAATCTAATCATAAAACTTTTTTTTTTTTTTGTTATTTCACAAGCTTTTGAAAAAAAAAACCATAAAATTTTACACGATCATAGAAATTGTGTATATATAAGTTTAACAAAATATTCTAGAAAAGATATCGATTCAGATAGACATGCTTTTCCATTGCCTCAAAACTAAAGATCACATCATAATATTTGAGAAGAATAATGGTACATGGTTTAATTGGACCAATGCACCCAAAACTATATAGTGAATAAACAAAAAATTTAAGAGTACACAATAAAAAATTAAAAACAAAACATTAAGATCCATTTAGTAATCATTTGGTTTTTTATTTTTTGTTTTTGAAACTTAAGCGTGCCAACCTCTAAATTTCTGTTATCTATTTTTTATCGATAGTTTAAAAAACCAAACCAAAATTTGAAAACTAGCCGCTTTTAGAAGAAAAAAAATTGTTTTTGAAATTTAGCAAAAAGTCTAACCATTGTGCTTAAAAAAGATACAAATCATTCTAAGAAATGAGGAGAAAATATGCTTAATTTTTAAAAACAAAAAACCAAAAACATAGTGGTGCCAAAATAATTATTGAATGGAATTCTTTAAACAACCTAAAAGCAAACCTTCCTGTTCGACTCAATAATCAATTAATGAAGAATCATAAAAATAGTTATTTTTTCTTCAAGAAAATGTGAAACTTTTTCTTTTTTAGTACAGTACATATTATATTGAAATCTTGAAATCTTAGGCAAATATATCAAATAAATATTTGAAAAATACTATTTTAATGTGAGATTTAAAAAATAAAAAAGTTGATAAAGAAATATATATGATTTTGAGTTCAACACATTACGATAAAGATTTAATACCTTTAACCTCTTAATCGAAGATCTACGATTAAGTTGACAGAAATATAATTTTAGAAACCTGAAAAAACAAAGAACTTAATTGTTATCAAATATAAGATTAAAAAAAATTATAATCTAGAAGACTTTTGGTATTTGATTGCGGAAGGAGCTATAGCAACCTGAACAAATCAAAACATGCTTTTCTGGAGTACTTTTCCCTTTTTAAAGTAATTAGGAGTGCAGAGATCTTAAGAAACATCTCTTAGGAAGAGCAGAATTTGGGGGTGGTTCCCATCTAATTATTAAAGAACGTCTCTTAACTAGCTTATCTATGTCACCACTTATCAGCATTATTGAGTAACTAAAGTTTCTAATTAGTTTCTGATTGGTCAAAGTTTGTAACAAATTAGTTCTAGTCACATTAGTTATAGAATTACAACTCAAAAGTTCTAATCTTCTATGCTACAACTCAGAAGTTCTAATACTGCTCCTCGTTGCTTGCCTTTACCATTTCTTCTCTTTGAGACCGTGTGCTCAGTGACTTTTGTCATTCCAACTATTTTTATTAGTTTTGAATTTCATCGTCTTCTGTTGGATAAGGAAACTTCAGACGTAAAACGTTCTTTGTTAAGTGATTTCTATGTTTGTATTTGACCTCCAATCCATCTTAAGGGGCTTTTCTTTAACTCTTCCTCCATCTTTTATGCAGCCTCCATCCCTCTAGGCACACTTAATTCTCTTATTTCAGGAAAGTTGAAAAGTTGAAAATTTGAATGGCAAATCTTTTACTTGGCAAGACACGTATGGGAGAGTTCCATTTCGTTGGGGTCGTAGTGGTGGATTCTAAATACTTGAGTATCCTGATCATCTCCTTTGGCAATCTCCGGTAGTTCGTTAGATATGGAGCTATTTTTCTGAGTCATTTGGTGTTTGCTTGGCTTGTAACCGAAATTGTTGCTGAATGAGTCTTTTTTTGGGGGGATAAGAGACTATCTACAGTGTGTAGTTTGTTTTATGGGGCATTTTGACTTGCAAGGATTAGGAAAAGTTTATAGGCGTAGGTCCCTGGACGAAATTAGGTCTCCCACCAAGTTCAATGCCTCGGTTTTGATTTATGTTTCCAAGAATTGTTGTAAATATTGTTTGGTTGTCCTTTCGTATGCACTTCAAAATTGCAGATGAATCCATTCTCAACATTATAACTATAATTTGAGTTTAGCATCATTGCTATGGATAATGGTAACTGTTGTAGACCTTTAGTGGACCGATAGAGAGGACTGGCTTATTTTTGTGAAAATCTACCAAGACTGGGCCATTTTGGCAACAGAAGTTTCTGCATTCCTTAATATTACATCTCTTAGCATGTGTTGAAATCTTACTCTATAATCTAGAAAGGAACCTTAATACAAAGAAGTTGAGGTGTGAATTTCTCCTATGGGGTATGTTTGAATTTGATGTTTGTATCCTAGTCGACAAGGATAGTTAGGAGAGCTTGAAAGTAGTACACCTGGTTCCTTACAAATCACATCAAGAATCTTTATATTATTTCCTCTTTCTTTGACATCCTAGGTATGAAGCTTTTCGCAACACATTTTTTACACTAGAAAGAAATGAGGCTTAATGCCATTAGGAGCATTTTTCTGGGCATTGTAGATAGAAGGGAAGGAAAACTCTTTTTAATAGAAAGGAGGAAGAACTGAATTTCTGCTACCTCTACTAATGCATCACTCAAGTCCTTTTATAAAGAAATATAGGCTTTGAGTGAAGCTTGTGGTCTTGAGATGTGTGCAATTCCTCCCATGAATTCACAAGGAATTTGTTTCTGATGTTTGTTTGTTCTCTTGAGGTTTGGGTTCAGTGGATCTGTCTTGGTGTTTTTGGGCTTAGTTCTGCTCTTTAATTGGTGGTTTTTCTATTTGGTGGGAGCTTTCATTTTCCCCCCTGTTTTTGGGCCTTTTGTATCAGGGTTTTTACGGTTCTCAAGAGTTGTCTTTTGGCTTGGTTTTTTGTGTTGTGTTTGGTTATTCAGGCTCTTTCTTTGCAAGTTTTTCTTTGTTTAGTTTCCTATGTGTTTTTTCTTTTTTGAATTTCTTTAATGATTCTTTTCGTGTTCCATTAGGTTCTTGTTTCATTACTTTACTGAGTTTGTATCTTAAAGTATTAGTCTCTTTTCAATTATTACCGTCCCATATGCTGTTTCTGACTGCTATGCCCTCTCATACCTGACTCCAACCTTGCTCTCTTCAATGAAAAATTTCGTCATAGGTTCCAAGTGATTTATGCCAATTGAAGAAAACTCCTCTCCAACGCCTTTAGCTTTTGCCTTATACTTCCTTCTCGTTAAGAAATTTTGTTTCTCGTGTAAAACAGAAGATTTCCCCAGTTTGAGCTTATAGTCATAATTTTGACCTACTCTATCAATCTCAGTCATGTTTTCAGTTTAGGGCAACAAGAACATGCAAATATCAATTCCTCTCATAAGTGAGTAATCGGAGGCCTCAAAATACCTCGGGCTTGAAACTCACCTTGTCCTCCAGGTGGAACAAAGGAAATTGTCATTTCACAAAATTCATTTTAGGTATACGAGAGGAGGGGTAGAAAGGTAAAGTCAATGGAAACAAACCGTTAGAGATTGTGGGAGTCTATTGATTCTGTGGGAACCGTGGATCAAATGTGAGGTTGCTGGGTGAAAGGGTTTAAGTAGGGTTTGAGTAATCGGCTGGAGAATGGAATTTTGGTGAGAGATGTGGCTTTCTTGGAGAGGATTCTCAGCTCTCGAATGTGCCGACTCTGTAGTTCTTTTTTTGCGAATTTCCTTTGTTGCTAGTTATTTTCTATATTTGGAATCGTTTAGCTTGTGAAGTGTTTCCATGAAGTAAATATATAAGAAACAAGGGTGTTTGCCCTACTTTTCTAAGATATGTGCCTGTTCTTGTTGGGTTTTCAGTGTGTAGTTGATCAGATGCCTCTATAAATAAAATTAAAACCAATATTTTCAATTAGTAAGTCCTAGTTTGATAACCATTTGATCTTTAATTTTTTTATTTTTTTAAATCTAAGTCTATAAACACTACTTCCAATTTCCACCTATGAATTTCTTGTTTTGTTATCTTATTTTTTGAAATATTTTCAAAATAGAACCTACTTCTTGAAAACTAGAAAAAGTAAATTCCAAAAATTTGTTTTTGTTTTTGGAATTCAGTTAAGAAAATCAAATGTATTCTAAGAAAAGATGAAAACATTGTAAAGCAAGTGTAAGAAAACAAGCACAATTTTTAAAAATCAAATGGTTACCAAACATGGCCTAAGTGTAGAACTATTAGATAGGCTAAATGGTATTTACCTAAGTGAAATATCAGTAGATCATAGATATAATTTAGCACTTGCCTATTGGACCTGCTATCCCACTTGACCAAGTCATCACTCCCAACCTACGTTTTATACCAATATCATTCCTCTGCAATGTCAAACCACTATGCCTGCCAAGGGGTCAGGTCATTCATGGGACTACGTATATCTCCGTGCTCTACCTGTCATGAGGCCATACAAAGTTCCATTTCAATTGAGGCCCAGAGAAAGTTTTTTATTCTGTTGTTCCCTTAGGGTAGAAAATGGGAGATTTGTTTTGTTGGTTGGTTTGACTTTTTGTGAGGACCACCTTTGTTTTTCCCTGATGGAGTATCTTGGAATATTTATCATAGAAGAAAAATGACAGACAGAAAATTGAGGATTGGGCCAACCTTATTGTTGCTTTTGAGGTGATTATTCATTATGAGACCACGGATATTACGACCTTATTTGAATAGGATCTGTTCTATAGGTTGTACAACTGTGTCCTTGAGTTTTAAGGAGACCACAGATATTTGGTGTTGGAACATGGGAAAATGTGGGGTCTTTTCTTCGAGATCATTTAATACAACTCTATAATCAAGAGGAGATACTGGATGTGAAGACATGTACCTATCTGTTTGGAAAGGCCATTATCCCAAGGAAGGTGAAATTCTTCATTTGAGAGGTGAGCCACATGTACACCTTAATACGTGTGACAAGCTTCAGGGGCGCACTCCTTGGATCTCTATTAACCCAAATTGGTACACTATTTGCAAAAGTGATGGTGAATCATAAAACCATCTTTTTATCTAGTGCAACCTGGTCGGGATTTTCGGCGATTTTATTGTTGAAGCCCTTGGTTGGCACCTGGTTTTTCCTTGTCCCATTAAAGATCTCCTCCCCATTTGGTTTGTTGGCATCCTTTCAAGAAAGAAAAGAAGACTCTGGTTGAATTTAATTCGAGCTTTCTTCTAATCACAACTCTCGTATCTTCTCAAAGATAGAAGAAGATACTCAAACACACCTATCACTTTCTTAGCTCTAAATGGTGGAAATTGAGATCCCTTGTAACTCAAAGCTATAGTCGCACTAATCTTACGACCAATTGGAAGTGTTGTTTTGTAATCCATTAGACAGAATTTCCTTTTTTTGTAAATTTTATCATATGAATGAAATGATTCTCCCTGTTTTCTATAAAAAAAAATTAAAAGAAAAAAGAAAAAATCTGGAGCGCCCTAACCTTGCTGCAGCTGTTGAACAGATGTGTCAAGCTGAAAGAAACTGAAGATAGATGGATGAGGAAGCTGGCCTAGACATTTTCTAAGTGCCTCTTCATTTATATAATACGTAATTAGTAGTAGAGTAGATCATTGGTCAGAAATGTGGGGTCAGAAAGCCCCTATAAAGAGAGATTTTTTATTTGAACAGATCTTAGAAGGAATTAGGCAGTTATAGTCCAATACAACTGAAATGGTGACATGTGGTGTACACATGACCGTCTAATTGCTGTAATATTCTTCATTGATAAATTATAAATCTTATTGGTGACCTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGGGGGGGGGGGGGGGGGGAAGACCATGTAGGTCTTGAACATAGGTCTCAATATTATTTCGTTATTATCGGTATAATAGGTGAAATTGTTAAAACTTGTTTGTTTCAATTCAACTTTGGATATTCTAGGATAAAATGGTTGTTTGTCCAAATTTTAGGCGATCCCATTTACCACCGCTCTAATGTTGTCCTACGATCACAAATTTCAATCTTCCTACTTGCAAATTTGAATTTCATCCATAGAACTCTGGGGAGAATCTTGAAAAGGTCTTTAGCCTACTTCATGAGATTAAAAGTTTAGGTTTACTGGGAAAACTAAATTAAAAGGAATCATGGAGTAACTAGGGTCATCCTATTGATAATGCTCGCAAGGTATTTGTTAAATTTTCTACTTTCCATGTCTTCTCAATAAATTTTCATTTCTTGCAAATTTCATTAATCCATTTCAGAAATAGGAAGAGGACTTCATCTCTAACTCATGGATTATTTGACTGTCTTAGCAGCATGAAAACACTAATAGAACGATATAACAAAACAAAAGAGGAGCACCATCAGCTTGGGATCTCGACTTCAGAAGTCAAGGTATTCTTTAGCATCTAGGACTGTATTGTTTTTCATTCCCTCTGCCTGTCAGAGACATTAGGCAGTGGATCATGTATGATTTTTGAAACACAGATATCTAGATTTCCTATCTGTACAGTTTCTGATATGAGGATGACGATTAATAAATATTAGACATCATAGTTGTTACTAGTACAAGTAAGTTGTGGAATGTGGGGTGGGGAGGAGCGGGAGGGTTTGAGACAGTGCAGTTGAGGTATAGCAGCAGTTTGACTTGGATAAGAAGAATTCCCCAAATGAATTACTGGCTTCGCTAGTTACATCCAGAATCATAGTGAATTTGGATGTATTAGTACCCATTAATAATACTGTCTAGGTGATAGGAGCATACAAACGATAAGAATTATAAATGCAAATTATTTTGCTAAAAAGAGATGTTCCACAAACCTTCTGTTTACCTGCCATGCTGAAAGAACAATTCTAAACAAAAATCATGGAGAGCATGAATCTTGGTCCATTGAGCTAGCAATGTCCCTGAACAAAATCAAACGGATGATTCAACATCTAAATCCAGAAAATAAAACAAAAAGCAGAACGCATAAAAGTGGCAACCTGAAAAGTTAAGGTGACATCATATATTAACAAAAAGTATTAGACATTTCAACATAGTAATTTACATAAATTATAAGCTAATAAATAATTTTAAGAAAATACAATACTCTATTTTCCCCCAAAATTGTAACTTTATCAATTAATATCTAAGTGATTTTTTATGTTATTCAATAATTTAAAATAAAAACTGACCGAGAAAGTTTTCTCTAATTCATTAATGGGATTCTTTGGACTCCTGCAGTTTCCTTAAAATTGGAAATGTGTTCTAGCCCAGGATGTTGAGAGAACAAGGGTTGTAGGTTAGGATTTTTGAGAGGAAATGAGGTGTAGGCATGAGATTTCATGCTCATCTGCAGGCTGACATTCCATCGTCATCTGTAATGAAAAATTTAAGAATTCTATGATTTCAATATAACAGTTACAATAGTCAAATCTAAATATTTAACCACCATGGGTTGGCCTAGTGGTAAAAAAGGTCACCTACCTATGAATTAATTTCCTACGAATTTCCTTGACACCCGAATGTTGTAGGGTTAGGCAGGTTGTCCTTGAAAAGGAAGTCAAATCTAACAATTCAAAATTTTCATTCAATACATACATGCAGTTCAGGCTCAATATTCAATTTAGTATCAACGTTTGATCATAAGCAAACATGTATACTGTTTGTAGTGTGGAAAGAAATGTTCACGCTATTGTATTTGAATATTGATGCATTCAATAACAATTCTTCATACATACAATGATAAAAATGGTGTCTGAACATTTACATCACTCTTAAACTTCCACAATTAACATGCTAAGTATCTGAATTTTCAGAAATGCTTCCCAATATACTCTATGCTAGTTTCATAAATGTCTGCGCCTGTATGTAGAAGGAATACTCTTATATTTCTAAATAGTAAGGAAATTACATTCTGATTTTTAATCAGTACTGGCAAAGGGAAGCAGCAACATTACGGCAGCAACTGCAGAGCTTACATGAAAATCATCGGTACTAACATATCCTATTCTATTATATATCATTACATGTTTACTTGATAAACACTAATACTAGAAGGAAATGCAAGGGGTGAAACGCAAATATGAAACTTCCTTCAACTTCTTAATCGCCATAGCGCTAAGTGCATTGAGCCAAAAATCTACTTCACAAACTCATAACTGTGTACACTTACTCAGATATGGGAATAATATTTATTGATGACCAAGCATGATCCAAATGTATGTTTCCTAACATACTTCCACGTGTTTGCTTAAGTTAAAGCTGATACACAAGTTGAAAGAAATTAAAACCTAGAAAAATTCAAATGAAAACCATTAATTCATTCTGATAGAACACTAATAGATATAATTACAGGCAGATGATGGGTGAAGAGCTGACTGGTTTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCGTGGCGTCCGTATGAAGAAGGTATCTAACTGTATTATTTGTTAAATGTGTTTGGTGCTTTACACAACTTTTCATTTCTTTGAGCAGGATCAAATCTTAATGGATGAGATACAAGAGCTAAACAGAAAGGTTAAGGAACTACAGCTCTGAAATTTCTGTTCTCGGTTATTTTGGTTACTAAATTTCGTTCTCTTTGTTACAGGGAAACCTAATTCACCATGACAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAACCAGGAATTACACAAAAAGGTATAGATGTAGATAACTGAAGCAAACTTTAATTAAATCCAAAAAGATAAAAACCTAAAGGATTTAATTGGTTAACCAATAAAACTGTGTTGCTTAGTTGCTCTGAAAAGAAAATTTTCACCATCCTAGGTCTATGGAACAAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAACGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAACCACAGCAACAAGACAATGGGACACCAGAAAGAGCTACAAAACTGGGGTACAATTATGAAAAAATTTCATCAATGATCAACAATGAATACAAATGAACTTTTCCGTAGTCACTATTTCAATCTTGTTCTTTTGATGGTTGCAGCAGACTACAACTACGCTAGCAAAAAAAAAGACCTTACACCAACCAGGAAGATATTTCTTATTTTGCATCAAGAAATGGTGTAAGGTTGCAAATTATCTTCAATCAACGAAATGTGGTAGAGTAACGTCTATTCCATACCAAAAGAAACCAGCTTTGTCTAGTTTGTGGTGATTAAAACAATGCTATTTATGTGAAGAGAAGGCTATGCAAAACAAAAAATAATTGAAATCGCTTCAGCATGCACACTTCATTTTCCAGAAACCTTAAGGTCGGTTTGCCACCTTCATTATAATTAGTTAGGTTCAACTTCAAACGTTCATACTTATTTTATGACTGATGCTTGCGATATAATAAAAGAAAATTCTGGAGAATCGCCCAGAAAAGGAAACAAGTAGATTAAAAAAAGCATTTATCCCACACTAATTTTAGCCAAACAGTTGTATAAGGACGTATAGTATTTACCTCGGATCTCTCCTGCTCAACTACAGCAAACTGTTCCAGCAGTCTGTTTAGAAAATTTTGCATAACATTAGAGTAAGCCACAATTCAGCAAAAAATGTAACCAAAAATAAATAAATAAAACAAAATAAAATAACATAAAAGCCATCTCTACTAAGCAAAGTCATTATATGTCCAAGACAATAGTTTAATCAGTACATCACTGCAAATAATGATAATCCCAACAGCATAAATTCAATTTTTAAAGTAAGAAATATCATTTCATCAATCAATAAAACATGGAAGGGAAGAGCCCAACTCCATAGATAGAAGAGTTACGTTCCAATCATCGGCATTATATAGTGGAACTGAAGAACTTCCCCTTTAACAACTTTCAAAAAAACTTCCCCAAATGAATATGTTAGAAATGGTAGAAAATGATGGAAAAAGAATTACGAATGGTTCACAAACATATTGGATTGCACATCACAGAAACAATCAATATCCATAGTACTTTTGTAGAAAAAAATCCTAATAACAGCTTATTAAGTAAACAAGGCCTCTAGAACTAACTTGTATGTATTACCCAGTTAGCTTGAAGCAGGTAAGCTTAAATTACTGAAGCTCAAAGGTCCAGAAACAGATCTGGGACATTCTTGTTTCAAAATGTAAAAACTCTAAAGATAGATATTTTAAAAATAATCAAAACTCCAATGAGAAATTAAGAAAACAAAGAAACCCTAACTTTTGACCGTACTTGCACAACATACAAAGTGTAAGCAAATAAAATTAATTTTCAAAAGTAATACTACTCGAAAATAAGGTGCACAATCTCATTCATAATAAATAATGCGTCAAAAAAATGAAATTGATTTTAAAAAGTAATAATACTCAGGAATTATGTGCCAATGTCATATTCATAATAATGATCCTATTATGTGCACATTAAGTAGATAAATCTAACAATAATGAGCACAATGCATAAAATAGAATGAACTTCAGAAAGATTTACTTAAAATACTCCTATTTTCAGGATCCAAAATATGGCATCCAATGCATGAAACACTATTATTTATAGATAGAAATGCCTATGGGAGGAGTTACTAACATATGATGAAATTGAGGGAACTGCAGGAACTTGTTGGTCCTCTGAGAGTCAATCCTGAAAGGCTCTCCCCATAAGGAATCTTAAAGAAGCTGAAATTGAAGAGTGGGTTAATCTCTCCAACTTGCTTTCCCAATTTACCCCCTCACAGAATGCTGATTACTAGTTTTGGAACCTTGAAAGAATGGGATTTTCTCTTCAAAGTCCCTCTCTCAAACATTGGCTTCTTCTTCTTGCACTGGAGGTGATAGCATTTGTTTTCATATAATTTTTTTTCGTAACATTTATTTTCATAGTGGAAAAAGAGCATCCTAAGAAGATTAATTTTTTTATATGGGAGCTTAGCCATTCATGCATCAATCACGATCGCCTTCAAAGGAGGCTCCCTTGGCTCTATCTCTCCCCAAATTATTGTCCTCTTTGTTACAGGGATGCTGAAACACAGATATACACTTAATCAAAAATTGCCCCTGGCAGCCAACTATTGGAGCATGCTGATTGCATCCTTAAATGGTTTACTGTCTTCCCCAATGAAAATCACACTCGTCTTTCCTACATTCTCAAGGGACATCTGTTCAAGAAAGGGGGAAAAAACCGCTTTTCTTTGGAGTATTGAGAAAGTACACAATGCTCAAGTCTTCAAAGAAAAACACTCAAATTTCAACACAATTATGGAGAATACTGCTTACTTTGCTCTTTTGTGGTGTAAACAAACACCCCCTTTGTAATTCCACCATTTCTTCCCTCATTTCACAGTGGAAGAGTTCTTTGTAAATCCTTTTGATAGGACTTTTTTGTAGTCATTTCAATCAATAAATGAAATGTTTGTTTCCTATCTATAAAATAACAATAATAAATGATAATAATAAAAAAGAACCAAGGG

mRNA sequence

CGCAGATCCCTTTCCATAAATGGCGCTGTGCAGCTAAATGATGTGAATCCGCTTCAGTACAACGCTCCGTAGAAAAGCGCTGATTCTGTTTGATCTCACTTTGCCTTGACTCCAAACCGGCACCGCACTCATCCGCAAAGAAAGAAACGAGTTGCGGATCTAAGTATGGGGAGAGGCAAGATTGTAATTAGGAGGATCGATAATTCGACGAGCAGACAGGTGACTTTCTCGAAGCGCAGGAGCGGACTGCTGAAGAAGGCGAAAGAACTAGCGATCCTTTGTGACGCCGATGTTGGAGTCATCATCTTCTCCAGCACCAGCAAGCTCTATGAATACTCCAGCACCAGCATGAAAACACTAATAGAACGATATAACAAAACAAAAGAGGAGCACCATCAGCTTGGGATCTCGACTTCAGAAGTCAAGTACTGGCAAAGGGAAGCAGCAACATTACGGCAGCAACTGCAGAGCTTACATGAAAATCATCGGCAGATGATGGGTGAAGAGCTGACTGGTTTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCGTGGCGTCCGTATGAAGAAGGGAAACCTAATTCACCATGACAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAACCAGGAATTACACAAAAAGGTCTATGGAACAAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAACGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAACCACAGCAACAAGACAATGGGACACCAGAAAGAGCTACAAAACTGGGCAGACTACAACTACGCTAGCAAAAAAAAAGACCTTACACCAACCAGGAAGATATTTCTTATTTTGCATCAAGAAATGGTGTAAGGTTGCAAATTATCTTCAATCAACGAAATGTGGTAGAGTAACGTCTATTCCATACCAAAAGAAACCAGCTTTGTCTAGTTTGTGGTGATTAAAACAATGCTATTTATGTGAAGAGAAGGCTATGCAAAACAAAAAATAATTGAAATCGCTTCAGCATGCACACTTCATTTTCCAGAAACCTTAAGGAACTTGTTGGTCCTCTGAGAGTCAATCCTGAAAGGCTCTCCCCATAAGGAATCTTAAAGAAGCTGAAATTGAAGAGTGGGTTAATCTCTCCAACTTGCTTTCCCAATTTACCCCCTCACAGAATGCTGATTACTAGTTTTGGAACCTTGAAAGAATGGGATTTTCTCTTCAAAGTCCCTCTCTCAAACATTGGCTTCTTCTTCTTGCACTGGAGCCATTCATGCATCAATCACGATCGCCTTCAAAGGAGGCTCCCTTGGCTCTATCTCTCCCCAAATTATTGTCCTCTTTGTTACAGGGATGCTGAAACACAGATATACACTTAATCAAAAATTGCCCCTGGCAGCCAACTATTGGAGCATGCTGATTGCATCCTTAAATGGTTTACTGTCTTCCCCAATGAAAATCACACTCGTCTTTCCTACATTCTCAAGGGACATCTGTTCAAGAAAGGGGGAAAAAACCGCTTTTCTTTGGAGTATTGAGAAAGTACACAATGCTCAAGTCTTCAAAGAAAAACACTCAAATTTCAACACAATTATGGAGAATACTGCTTACTTTGCTCTTTTGTGGTGTAAACAAACACCCCCTTTGTAATTCCACCATTTCTTCCCTCATTTCACAGTGGAAGAGTTCTTTGTAAATCCTTTTGATAGGACTTTTTTGTAGTCATTTCAATCAATAAATGAAATGTTTGTTTCCTATCTATAAAATAACAATAATAAATGATAATAATAAAAAAGAACCAAGGG

Coding sequence (CDS)

ATGGGGAGAGGCAAGATTGTAATTAGGAGGATCGATAATTCGACGAGCAGACAGGTGACTTTCTCGAAGCGCAGGAGCGGACTGCTGAAGAAGGCGAAAGAACTAGCGATCCTTTGTGACGCCGATGTTGGAGTCATCATCTTCTCCAGCACCAGCAAGCTCTATGAATACTCCAGCACCAGCATGAAAACACTAATAGAACGATATAACAAAACAAAAGAGGAGCACCATCAGCTTGGGATCTCGACTTCAGAAGTCAAGTACTGGCAAAGGGAAGCAGCAACATTACGGCAGCAACTGCAGAGCTTACATGAAAATCATCGGCAGATGATGGGTGAAGAGCTGACTGGTTTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCGTGGCGTCCGTATGAAGAAGGGAAACCTAATTCACCATGACAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAACCAGGAATTACACAAAAAGGTCTATGGAACAAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAACGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAACCACAGCAACAAGACAATGGGACACCAGAAAGAGCTACAAAACTGGGCAGACTACAACTACGCTAG

Protein sequence

MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSSTSMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR

Homology

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 8.0e-67
Identity = 143/239 (59.83%), Postives = 178/239 (74.48%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+G+ KKAKELAILCDA+VG++IFSST +LYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK++I+RY K+K+E   +    SE+K+WQREAA+LRQQL +L ENHRQ+MGE+L+GL+V
Sbjct: 61  SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           K+LQ+LENQLEISLR VR K              KG+L+H +NMELYKK++LIRQEN EL
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAEL 180

Query: 181 HKKVYGTKDANGAHISSLT-NGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQL 225
           +KK+Y T+  +  +  S T     V E   +P+ L LS   Q  +     A KLG LQL
Sbjct: 181 YKKIYETEGPSEVNRDSPTPYNFAVIEKTNVPVQLGLSTLPQHSDAEQSTAPKLG-LQL 238

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-64
Identity = 142/236 (60.17%), Postives = 179/236 (75.85%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKI I+RI+NSTSRQVTFSKRR+GLLKKAKELAILCDA+VGVIIFSST +LY++SS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK++IERY+  K E        SE+++WQ+EAA L++QL +L ENHRQMMGEEL+GLSV
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKK--------------GNLIHHDNMELYKKVNLIRQENQEL 180
           + LQNLENQLE+SLRGVRMKK              GNL+H +N++L+KKVNL+ Q+N EL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HKK---VYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKL 220
           H+K   V G K AN    S LTNGL + + +   ++LQLSQP Q D+ T  +A +L
Sbjct: 181 HEKVSEVEGVKIAN--KNSLLTNGLDMRDTSNEHVHLQLSQP-QHDHETHSKAIQL 233

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.9e-62
Identity = 136/233 (58.37%), Postives = 168/233 (72.10%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVI+RID+STSRQVTFSKRR GL+KKAKELAILCDA+VG+IIFSST KLY+++S+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK++I+RYNK+K E  QL    SEVK+WQREAA LRQ+L +L ENHRQMMGE+L GLSV
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
            +L +LENQ+EISLRG+RM+              K NLIH +N++L +KV  I QEN EL
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGED-AGIPINLQLSQPQQQDNGTPERATK 219
           +KK Y        H       + V +D +   I LQLSQP+  D  TP RA +
Sbjct: 181 YKKAYMANTNGFTH-----REVAVADDESHTQIRLQLSQPEHSDYDTPPRANE 228

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 4.2e-60
Identity = 128/221 (57.92%), Postives = 164/221 (74.21%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVI++ID+STSRQVTFSKRR GL+KKAKELAILCDA+V +IIFS+T KLY+++S+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           S+K+ IER+N  K E  +L    SEVK+WQREA TLRQ+L SL EN+RQ+ G EL GLSV
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           K+LQN+E+QLE+SLRG+RMK              K NL+HH+N+EL +KV  I QEN EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQ 208
           +KK YGT + NG     L + +    ++   + LQLSQP+Q
Sbjct: 181 YKKAYGTSNTNGLGHHELVDAV---YESHAQVRLQLSQPEQ 218

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot
Match: Q6Z6W2 (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS57 PE=1 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 2.3e-58
Identity = 129/228 (56.58%), Postives = 171/228 (75.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+GLLKKAKEL+ILCDA+VG+++FSST +LYE+SST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           +MKT+I+RY   KEE    G +TSE+K WQREAA+LRQQL +L E+H+Q+MGEEL+GL V
Sbjct: 61  NMKTVIDRYTNAKEELLG-GNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           +DLQ LEN+LEISLR +RM+              KG+LIH +N+EL + +N++ Q+  EL
Sbjct: 121 RDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKLEL 180

Query: 181 HKKVY-----GTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQD 210
           + K+      G  DAN +  SS      + ++A +P +L+LSQ QQ++
Sbjct: 181 YNKLQACEQRGATDANES--SSTPYSFRIIQNANMPPSLELSQSQQRE 225

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL
Match: A0A1S3CQH6 (MADS-box transcription factor 23-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103503640 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.9e-113
Identity = 219/225 (97.33%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAH 180
           KDLQNLENQLEISLRGVRMKKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAH
Sbjct: 121 KDLQNLENQLEISLRGVRMKKGNLIHQDNMELYKKVNLIHQENQELHKKVYGTKDANGAH 180

Query: 181 ISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           ISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLGRLQLR
Sbjct: 181 ISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLGRLQLR 225

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL
Match: A0A1S4E6G1 (MADS-box transcription factor 23-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503640 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.6e-110
Identity = 219/239 (91.63%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIH DNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILVDEIQELNRKGNLIHQDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           HKKVYGTKDANGAHISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLGRLQLR
Sbjct: 181 HKKVYGTKDANGAHISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLGRLQLR 239

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL
Match: A0A5A7T5X8 (MADS-box transcription factor 23-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001840 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.6e-110
Identity = 219/239 (91.63%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIH DNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILVDEIQELNRKGNLIHQDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           HKKVYGTKDANGAHISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLGRLQLR
Sbjct: 181 HKKVYGTKDANGAHISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLGRLQLR 239

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL
Match: A0A1S3CQJ0 (MADS-box transcription factor 23-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503640 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 218/239 (91.21%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIH DNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILVDEIQELNRKGNLIHQDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           HKKVYGTKDANGAHISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLG LQLR
Sbjct: 181 HKKVYGTKDANGAHISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLG-LQLR 238

[Close]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL
Match: A0A0A0LGY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893290 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 212/234 (90.60%), Postives = 214/234 (91.45%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGI TSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGIPTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIHHDNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILMEEIQELNRKGNLIHHDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLG 221
           HKKVYGTKDANGAHISS+TNGL VGEDAGIPINLQLSQPQQQDN  PERATKLG
Sbjct: 181 HKKVYGTKDANGAHISSITNGLSVGEDAGIPINLQLSQPQQQDNEAPERATKLG 234

[Close]

BLAST of Lsi04G022910.1 vs. NCBI nr
Match: XP_008466133.1 (PREDICTED: MADS-box transcription factor 23-like isoform X4 [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 219/225 (97.33%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAH 180
           KDLQNLENQLEISLRGVRMKKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAH
Sbjct: 121 KDLQNLENQLEISLRGVRMKKGNLIHQDNMELYKKVNLIHQENQELHKKVYGTKDANGAH 180

Query: 181 ISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           ISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLGRLQLR
Sbjct: 181 ISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLGRLQLR 225

[Close]

BLAST of Lsi04G022910.1 vs. NCBI nr
Match: XP_011652593.1 (MADS-box transcription factor 23 isoform X3 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.5e-112
Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGI TSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGIPTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAH 180
           KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLI QENQELHKKVYGTKDANGAH
Sbjct: 121 KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIHQENQELHKKVYGTKDANGAH 180

Query: 181 ISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           ISS+TNGL VGEDAGIPINLQLSQPQQQDN  PERATKLGRLQLR
Sbjct: 181 ISSITNGLSVGEDAGIPINLQLSQPQQQDNEAPERATKLGRLQLR 225

[Close]

BLAST of Lsi04G022910.1 vs. NCBI nr
Match: XP_038898974.1 (MADS-box transcription factor 23-like isoform X3 [Benincasa hispida])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 216/225 (96.00%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMKTLIERYNKTK+EHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKTLIERYNKTKDEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAH 180
           KDLQNLENQLEISL GVRMKKGN IH +NMELY+KV LIRQENQELHKKVYGTKDANGAH
Sbjct: 121 KDLQNLENQLEISLHGVRMKKGNFIHQNNMELYEKVTLIRQENQELHKKVYGTKDANGAH 180

Query: 181 ISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           ISSLTNGLGVGEDAGIPINLQLSQPQQQDN  PERATKLGRLQLR
Sbjct: 181 ISSLTNGLGVGEDAGIPINLQLSQPQQQDNEAPERATKLGRLQLR 225

[Close]

BLAST of Lsi04G022910.1 vs. NCBI nr
Match: XP_008466131.1 (PREDICTED: MADS-box transcription factor 23-like isoform X1 [Cucumis melo] >XP_016903555.1 PREDICTED: MADS-box transcription factor 23-like isoform X1 [Cucumis melo] >KAA0038650.1 MADS-box transcription factor 23-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 407.1 bits (1045), Expect = 9.6e-110
Identity = 219/239 (91.63%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIH DNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILVDEIQELNRKGNLIHQDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           HKKVYGTKDANGAHISSLTNGL VGEDAGIPINLQLSQPQQQDN TPERATKLGRLQLR
Sbjct: 181 HKKVYGTKDANGAHISSLTNGLSVGEDAGIPINLQLSQPQQQDNETPERATKLGRLQLR 239

[Close]

BLAST of Lsi04G022910.1 vs. NCBI nr
Match: XP_004136416.2 (MADS-box transcription factor 23 isoform X1 [Cucumis sativus] >XP_011652592.1 MADS-box transcription factor 23 isoform X1 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 217/239 (90.79%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK LIERYNKTKEE+HQLGI TSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV
Sbjct: 61  SMKALIERYNKTKEENHQLGIPTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           KDLQNLENQLEISLRGVRMK              KGNLIHHDNMELYKKVNLI QENQEL
Sbjct: 121 KDLQNLENQLEISLRGVRMKKDQILMEEIQELNRKGNLIHHDNMELYKKVNLIHQENQEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQLR 226
           HKKVYGTKDANGAHISS+TNGL VGEDAGIPINLQLSQPQQQDN  PERATKLGRLQLR
Sbjct: 181 HKKVYGTKDANGAHISSITNGLSVGEDAGIPINLQLSQPQQQDNEAPERATKLGRLQLR 239

[Close]

BLAST of Lsi04G022910.1 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-65
Identity = 142/236 (60.17%), Postives = 179/236 (75.85%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKI I+RI+NSTSRQVTFSKRR+GLLKKAKELAILCDA+VGVIIFSST +LY++SS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK++IERY+  K E        SE+++WQ+EAA L++QL +L ENHRQMMGEEL+GLSV
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMKK--------------GNLIHHDNMELYKKVNLIRQENQEL 180
           + LQNLENQLE+SLRGVRMKK              GNL+H +N++L+KKVNL+ Q+N EL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HKK---VYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKL 220
           H+K   V G K AN    S LTNGL + + +   ++LQLSQP Q D+ T  +A +L
Sbjct: 181 HEKVSEVEGVKIAN--KNSLLTNGLDMRDTSNEHVHLQLSQP-QHDHETHSKAIQL 233

[Close]

BLAST of Lsi04G022910.1 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-63
Identity = 136/233 (58.37%), Postives = 168/233 (72.10%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVI+RID+STSRQVTFSKRR GL+KKAKELAILCDA+VG+IIFSST KLY+++S+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           SMK++I+RYNK+K E  QL    SEVK+WQREAA LRQ+L +L ENHRQMMGE+L GLSV
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
            +L +LENQ+EISLRG+RM+              K NLIH +N++L +KV  I QEN EL
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGED-AGIPINLQLSQPQQQDNGTPERATK 219
           +KK Y        H       + V +D +   I LQLSQP+  D  TP RA +
Sbjct: 181 YKKAYMANTNGFTH-----REVAVADDESHTQIRLQLSQPEHSDYDTPPRANE 228

[Close]

BLAST of Lsi04G022910.1 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 )

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-61
Identity = 128/221 (57.92%), Postives = 164/221 (74.21%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKIVI++ID+STSRQVTFSKRR GL+KKAKELAILCDA+V +IIFS+T KLY+++S+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSV 120
           S+K+ IER+N  K E  +L    SEVK+WQREA TLRQ+L SL EN+RQ+ G EL GLSV
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQEL 180
           K+LQN+E+QLE+SLRG+RMK              K NL+HH+N+EL +KV  I QEN EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

Query: 181 HKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQ 208
           +KK YGT + NG     L + +    ++   + LQLSQP+Q
Sbjct: 181 YKKAYGTSNTNGLGHHELVDAV---YESHAQVRLQLSQPEQ 218

[Close]

BLAST of Lsi04G022910.1 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 )

HSP 1 Score: 221.5 bits (563), Expect = 7.0e-58
Identity = 135/239 (56.49%), Postives = 169/239 (70.71%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEY-SS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKEL+ILCDA+VGVIIFSST KLY+Y S+
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  TSMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLS 120
           +SMKT+IERYN+ KEE HQL    SE+K+WQRE A+L+QQLQ L E HR+++GEEL+G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 VKDLQNLENQLEISLRGVRMK--------------KGNLIHHDNMELYKKVNLIRQENQE 180
             DLQNLE+QL  SL+GVR+K              KG +I  +N EL   V+++R+EN +
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180

Query: 181 LHKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKLGRLQL 225
           L KKV+G    N    +S  + +  G     P  LQL Q Q       E++ +LG LQL
Sbjct: 181 LQKKVHGR--TNAIEGNSSVDPISNGTTTYAPPQLQLIQLQPAPR---EKSIRLG-LQL 233

[Close]

BLAST of Lsi04G022910.1 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-54
Identity = 133/237 (56.12%), Postives = 167/237 (70.46%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSST 60
           MGRGKI I+RI+NSTSRQVTFSKRR+GLLKKAKELAILCDA+VGVIIFSST +LY++SS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMKTLIERYNKTKEEHHQLGISTSEVKYWQREAATLRQQLQSLH-ENHRQMMGEELTGLS 120
           SMK++IERY+  K E        SE++  +    TL +   S      RQMMGEEL+GLS
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQ--EMYIVTLEKYAYSEELVLDRQMMGEELSGLS 120

Query: 121 VKDLQNLENQLEISLRGVRMKK--------------GNLIHHDNMELYKKVNLIRQENQE 180
           V+ LQNLENQLE+SLRGVRMKK              GNL+H +N++L+KKVNL+ Q+N E
Sbjct: 121 VEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNME 180

Query: 181 LHKK---VYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNGTPERATKL 220
           LH+K   V G K AN    S LTNGL + + +   ++LQLSQP Q D+ T  +A +L
Sbjct: 181 LHEKVSEVEGVKIAN--KNSLLTNGLDMRDTSNEHVHLQLSQP-QHDHETHSKAIQL 232

The following BLAST results are available for this feature:

BLAST of Lsi04G022910.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EP49	8.0e-67	59.83	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
A2RVQ5	1.7e-64	60.17	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=...	[more]
Q9SZJ6	5.9e-62	58.37	Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=...	[more]
Q38840	4.2e-60	57.92	Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=...	[more]
Q6Z6W2	2.3e-58	56.58	MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of Lsi04G022910.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQH6	5.9e-113	97.33	MADS-box transcription factor 23-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S4E6G1	4.6e-110	91.63	MADS-box transcription factor 23-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7T5X8	4.6e-110	91.63	MADS-box transcription factor 23-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CQJ0	3.3e-108	91.21	MADS-box transcription factor 23-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LGY3	3.7e-107	90.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893290 PE=4 SV=1	[more]

BLAST of Lsi04G022910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466133.1	1.2e-112	97.33	PREDICTED: MADS-box transcription factor 23-like isoform X4 [Cucumis melo]	[more]
XP_011652593.1	3.5e-112	96.44	MADS-box transcription factor 23 isoform X3 [Cucumis sativus]	[more]
XP_038898974.1	1.3e-111	96.00	MADS-box transcription factor 23-like isoform X3 [Benincasa hispida]	[more]
XP_008466131.1	9.6e-110	91.63	PREDICTED: MADS-box transcription factor 23-like isoform X1 [Cucumis melo] >XP_0...	[more]
XP_004136416.2	2.8e-109	90.79	MADS-box transcription factor 23 isoform X1 [Cucumis sativus] >XP_011652592.1 MA...	[more]

BLAST of Lsi04G022910.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57230.1	1.2e-65	60.17	AGAMOUS-like 16	[more]
AT4G37940.1	4.2e-63	58.37	AGAMOUS-like 21	[more]
AT2G22630.1	3.0e-61	57.92	AGAMOUS-like 17	[more]
AT2G14210.1	7.0e-58	56.49	AGAMOUS-like 44	[more]
AT3G57230.2	2.7e-54	56.12	AGAMOUS-like 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..225
None	No IPR available	PANTHER	PTHR48019:SF83	MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1	coord: 1..223
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..223
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 70.24 coord: 3..23 score: 62.79 coord: 38..59 score: 56.66
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.4E-38 score: 141.6
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 3.9E-24 score: 83.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.739702
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 83..170 e-value: 4.1E-22 score: 78.2
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 86..176 score: 13.824177
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..94 e-value: 2.3E-28 score: 100.1
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..90
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..78 e-value: 1.33831E-44 score: 141.921

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi04G022910	Lsi04G022910	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G022910.1.exon.10	Lsi04G022910.1.exon.10	exon
Lsi04G022910.1.exon.9	Lsi04G022910.1.exon.9	exon
Lsi04G022910.1.exon.8	Lsi04G022910.1.exon.8	exon
Lsi04G022910.1.exon.7	Lsi04G022910.1.exon.7	exon
Lsi04G022910.1.exon.6	Lsi04G022910.1.exon.6	exon
Lsi04G022910.1.exon.5	Lsi04G022910.1.exon.5	exon
Lsi04G022910.1.exon.4	Lsi04G022910.1.exon.4	exon
Lsi04G022910.1.exon.3	Lsi04G022910.1.exon.3	exon
Lsi04G022910.1.exon.2	Lsi04G022910.1.exon.2	exon
Lsi04G022910.1.exon.1	Lsi04G022910.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G022910.1.five_prime_UTR.1	Lsi04G022910.1.five_prime_UTR.1	five_prime_UTR
Lsi04G022910.1.five_prime_UTR.2	Lsi04G022910.1.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G022910.1.CDS.1	Lsi04G022910.1.CDS.1	CDS
Lsi04G022910.1.CDS.2	Lsi04G022910.1.CDS.2	CDS
Lsi04G022910.1.CDS.3	Lsi04G022910.1.CDS.3	CDS
Lsi04G022910.1.CDS.4	Lsi04G022910.1.CDS.4	CDS
Lsi04G022910.1.CDS.5	Lsi04G022910.1.CDS.5	CDS
Lsi04G022910.1.CDS.6	Lsi04G022910.1.CDS.6	CDS
Lsi04G022910.1.CDS.7	Lsi04G022910.1.CDS.7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G022910.1.three_prime_UTR.1	Lsi04G022910.1.three_prime_UTR.1	three_prime_UTR
Lsi04G022910.1.three_prime_UTR.2	Lsi04G022910.1.three_prime_UTR.2	three_prime_UTR
Lsi04G022910.1.three_prime_UTR.3	Lsi04G022910.1.three_prime_UTR.3	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi04G022910.1	Lsi04G022910.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding