Lsi02G009320.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G009320.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 9126703 .. 9134477 (+)
Sequence length900
RNA-Seq ExpressionLsi02G009320.1
SyntenyLsi02G009320.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTGTGAATGCACCCCATGGATTGAAATCCACTATCTTAACAGCTTCATTTTTCGTCACATACACATCGAACGTGTAATTCTCCGATTCGAAGCTTGACTTCACATGGTCGATAAAGAATTCTCGGATTGCTTCTTGCAAGCTCTCCTTCTTCTCCACTAATGCAGGATAGAACGTCGTGACCTCGCGCTGGGAAATGCCAACCAGGTCCCGATTCCTCACGAAGCAACGAAATTCCATCTCTGGCCGAAGGCACGGGTACCACTTGCGCAGTGCGAGGAAGAATTTGAATGGCCTCGATGAAGATTTGTCGGTGCAGGAATCGTACGCGTGACACAGATCGTGAACAAGAGAATCGGACGATCGAAGCATGAGCGCAATCTCACTGAACGAAGAGCATTTCAATGTCCCGTTAGGGCTAATCCACGCAGAGTCTTTCGGTGCGCTCCAGTTCAACTTAGGGAAGACGGAACCTCCGAGGGAGGAAATCGAGTGTTTAACATCAGATTCAAGCTCCGGAAAGGAAGGAGGCGAAGTGGATTGCTCGGAATCATCATCGGATTCTTCTTTCAACTGGTAATCCTGTTCATCTTCGGGATTAATGACTCTATTGGGAAGAGCATCGTCGTTGGAGATGGAAAGTGGAAGGAGGAAAGGGCCAGAGTCGTCGAGAAGGTATTGAACGAAAGGTTCTGGAAGGTGGTGAATTAGGGTTTTGATAGAGAAGGATTTGAATTTTGGATACCATTCTTGAATTTGGCAGCGATTGACTTCTTCTTCCTTCATTTGGTTGCAGAAACTCTGGTTCTGAGTTAGGGCAGATGCGTGGGGAAGACGAAGGCGAGTGGTCTCGGATGGTTTTATAGTCCCGAAGATCTATGCAACCAAGGTTTGTTTTTCTATAGTATTAAAAGAAAAAAAAAACTAGTTATTTATACGTTAAAAAAGAAAATGGTTAAATTATAGGGTTGCTTTGAAATATAGAAAAATGAGTCAAGTTATTTATAAATATAGAAAAATTTTACCGTGATAGACCGGGATAGAATTCTATCGATTTTTATCACTCAAGCTATAGAAAGCGCGGTCTATCACTAATAGATAGTAAAACTTTTTTTATATTTGTAAAATGTTTGATATTTTTTCTGTTCATAGTAATTTTTCTAAATTATATTACATATTACAAGATTAAAAAAACGTTGTTATCTTTAAAATCTCGTTTGTTAACCATTTCGTTTTTTGTTTTTAGTTTTTGAAAATTAAGTTAATAGTTGAACTAATTATGTTGAATTTCAGTCTTCATCCTGGTTGAGATTCTATTGAAAAATTTCAAAACAATCGATGATTTGGATATAAGATGAAAAAGATAATTTTTTTTTTTAAATTCAAGTCTCAGTGATCGATTTCAACCGAGAAGAAATGAGAAAAACTATTTTAACAAATTTAAAAAAAGTGTGCTAGTTATGAAATGAAAGGGATATTTCTGACAATTTTCTTAATATTTTACTCTTTTTCTTCTTTTTCTTTTTTATTTTGTGAAAGATGTAATGTTTTACTTTAATGGTGCGACTAGGTAGATTGAAATATACAACTGCATTTCCAATTATTGATTTAGAAAAAGGGACAAAATTTGGTTAATTGATATATAAAAGATAAATTTTTAAAAATGGAAAAATAAGAAAAACTATTAACACAAAATAGTAAAATTTTTAGATGGTTGTAATAAATGCTGATAGGAGTCTATCAGGGTCTATCGGTGATAGAAATGATAGAAATCTATCACTGATAAATGCTGATAGAAGTTTATCAATGTCTATCCGTGTTTTTTTTACTATTTTATATAAATAGTTTGACATTTTTTCTATCTATGAAAATTTTCCTATATAAATTTTATTTCCTAATATGTTTTAGACCGCCTAAAAAAAGTTTTAGAAAATATTAGTTACTAAAATAAAAATTTAAAATATACGAATGCATTTCTCTATTATTTATTCTTTTAGATTTGGGAAACATGTATATAATAATTTTCTCCGAAACTTGATTGTAGGACTATTTTCAAATATAGAAAAGTGAGCTAAACTATTTATAAATATATAAAACAAATTGTGATAGAATTCTATCGATTGAACAATTATCGCTTAAATGATAGAAGTCTATCGTGATTTATCGCGGATAGATAGTGAAATTTTTTTTATACTTATAAATAGTTTGATATTTTTTCTGGTTATAGTAATTTCCTTTTATTGTATATAATTTTACAAATGATAAGATTTAGGAATATCGAGATAATAAAATCAATTGCATACTTAAACATAGTTCGACCAGTAAATATTAACTTTTTTTTAGGTGAAAGTTCAAATCTTCATTCTCCGTCTCATTGTTTGAAAGATAATGTTTACTTGTAGAATAAATTTTAACCTAAGTTAAGGACCTGTTTCGATTTACTAAAGAAAAAAAATGTACTTTAAAAAGTCATTTTTATTTAAACTCTTTTGATAAAGGTTTAAAATACACTTGGAACGCTAGTTTAAAGGGGTTGTCAAACACTTCAATTTTTTCTAAAATGACTTACTTTAAAATTAAACACTTAAAAAGTTAAACCAAACACACCCTAAGTTTACGTCATTATAATTTTGTATTTCTAAAATAATTCAATAGTAAGACTATTAGGGGCTGTTTAGATCGCAAATATTGTTTCATGGGTATGAATATTAAATTTCTGGTCGTGTTTGGATTTAGAGGATAATTAATGTCTGGAAATTAAATAAATGTGTTTGATTTACCAATTTTATATATAAAATTACCAATTTTGTATATAAAAACTAAAACTAAATAATTATTTAATCAAATGTAAGAGAACAAGTAATGTAATAATTAAATTTAATTATAGAATATATCGTTATATTTGATTACTTATTAAATCACTCAAAATATCAATAAATGAATATTTTTAATTAAACATTATTTAAATTATTTTATTTGATTAACAAAAATGATTAAATAATATAAATCAATTAAAATATTAATAATTGATAAAAAAAATTTATATTAAATAGTTAGGATAACATAAAATATCAATGGTAAATGTATTAGTTGAAATTTATTAAGTCTAAATAATATATTGGGCTATTTTCAAATATAGCAAAATGAGCCAAAATATTTACAAATATAGCAAAATATCATTGTCTATCAATGATAGATAGTGCACTGATAGACTCTATTAGTGTCTATCATTGATAGACAGTGATAGATAATAATAGTCTATTAGTGTTTATCACTAATAGAAGTGACATTTTGCTATATAAGTAAATATTTTCAGAGTTTTGTTATTTGAAACAATTATCCTAGTATATTTATATTTAATAATGAATTAGAATGGATAGTTATGATTAATTTATATTAATTTATCAATTAATCAAACTCTATTCATCTCCTAGATATAAAAATTCCATAAGTATGGAGAGAATTAAAAAACCCATGTCAGATGGGTTTTAAAGTTTCCTGGATTATAATATCCTGCATTTTAAAAAGTGAAATCCTATAAAACTAACCAGAATATTAAATGTCCGTCTGAAATCCTATGACAATATTTGTGAAACAAACAGGCCCTTTAAGCTATACTCAAATTTTTCACGTTATATTATTTTAGCACCCACCAACAAGTTCATCTATAATTTTAGCAAAACGTATAAAACTAGCATCTCTTTACTTGGGTTCTTCCAATCTAAGACTAAGAAGAAGCTGTTTTTTTAATTAAAAAAAAAAAAAAAATCTTCCATGTGTATTTATATATGTTCCAATGCATTTGTATTTGTTGATGGTATGTTTGAATTAGGATAGCCTTCTTCCACTGATATAGTTTGCTTCATTACACATTCCTTTGCTTCTCTGTCTTTACCCCACAGAAGAATGTACATTCCACTTATGATCAACACTGACCCCACAACACTGCCAATTCACAATTTCACATTTTCAGTCCAACAAAATTTATCTTCCTTGTATTATTTTAGATGTTGATAGAAGATTTTAGGCCTTGTTTGATAATCAATTAGTTTTTTATGTTTTGTTTTTGAAAATTAAGCTTATAAACGCTTATTCTATCTCTACATTTCTTGATTTGTTATCTACTTTTTACCAATAATTTTAAAAATCGAGCGAAATTTTGAAAACTAAAGACCCCGTTTGGTAATCATTTTATTTTTTGTTTTTGGTTTTGGTTTTTGAAAATTAAACCTATTTCCTCTCAACTTCTCACAATGGTTTACACTTTTCTTGAGTAAAAGAGTTGAGTTCTTAACAAAATTTCAAGAACAAATACAAGCTTTTACAAACTATTTTTTTTAGATTTCAAAACTTGGCTTGGTTTTTTAAAACAATGGTCAAAAGTAGATGGCAAAACAAGGAATTTAAAGGTGAAACGTGTGGTTTTAGGCTTAATTTTCAAAAACCAAATGATTACCAAACGGGACAAAAAAAAATAGTTTTTGGAATTTGGCCAAGAATTCAACTCTTGTACTCAAGAAAGAAGCGGATCATTGTATGAAATTGAGAGGAAATAGACTTAATTTCCAAAAATCAAAAACAAAAAAGAAAATAGTTACCTAACGGAGCTTAGATGTAGAAGAGAGTGCCATTGTATTGACATAATTTGTGTTAGTTAAATCTGTTATTATTATTATTATTACTACTTTTCCTAAAAGAGAGCAAAGTTAAAAACAATTTTTCAGTCTTGATCAAGAAATAAGAGGGAAAAGAAGAAAGAAAGAAGCAGACCTTCCTAGATGAATCTGTTCGTGTAAGATGAAGAAATCAAATATGGCTGCAAAAATCTCCATAAAAGGGGTGAAAGCAGCTGTGAAAACTGGCCCTTTTTGTTTTACACACCAAGACATCCCCACATAACACAACCCTGAACCCACTGATCCCTGTTAAACCCATCACAAAAAACATAATTTAGCAACAAATAGCAACTGAAGTTACAAAAAAAAGAAAAGAAAACTGATACTTACAGCATATATGAGACTTAAGATAGCAAACTTCCCTTTCACAATGAACAAAGAGTTCGTCCTGTCTATAATCAAGTGCAAAACAACTGATTGAATGGCACTGAAAAATGACATAATACAAGTACTAGAATATTGACATGGATAAACCTTGCCAACTCTTGATTGCATAAGGAACCAAGAGGACCACATAAAGCAGCCAGCAGTCAAAACCAATGAACCTATTAACCATTTTCCTGGTGTTTCAGCTTCAACTGTTTCACGAATTCTGTTTGTTTTCCCGGTTGCCGATCCGGGGCTCATTAGTGGCATTCCTTTGTAAAGAATCAAAATTAAGTTTCCTGAAATGCACACTAGAGTCCCAAGCACTTTGGCTATTCCACCCTTCCTTTTTATGTCCACTTTTTCCATTCTGGAAATATTTTGAAACCAAAGTTACTATCATCACATTTCAGTCAACATTACGAAAGAAAATGAACTATAGTTCTTTCGGCACGCACCGGAACAATACGGCTAGTATGAACGTGTTTACGGGCACTAGGTTGAGAAATGCACAAGAGAAAGTTGCAGATGTGTAGTGCAGACCAATTAGGAATAGGTATAATGTTAGTGTTAACCTGCATTAGTACATCATTCCAAAGTTTCTTACTGACTAAAACAACATCATAAAGTTATGGGACAGGTGAAAATGTCGCAATTAGGCCCAAAGTATTAGCAGATATAACACAATGCAAAAGAATTTGCAGATGTAGCAAAATTTAGATCCAACTCTTGGAGTCTATCGGTGATAGGCTATATAGCTGATAAAAGTCCATCACTAAAAGATTTTTCTATATTTGCAATTCATAAAAGTTGTTGCTATATACTTAATTATTAGCCTGAAAAGTACTATGGTGAAGTTTACATATATACTAACCCAAGTAAGGAACTGATGAAAAGGAGGAATAGGATGTAAGCTGTAAGCTGAGGTCTAGTTTTCCTGCATTTTCACCAAAAAAAGGGAGAACTCTTTATGGATTTGCAGCACTTAAAACATTTTCACACAACAAAGCAAAACTTGGACAAGTAAGAAGGAAAATGCAGGCTCTAGTATGGTAAAGGAACCAATATTATCTAAATTTTCAAGAAGTCAAGGTGACTTTACCTTTCCCAAAAATAAGCAATTGGCAACAAGAAAAGTGAGGAAATCGTTTGTCGATACACGACAATGAGTAACTGACTGATCCCTTCATTAAGAATCTCCTTAAGTAGTATGTTCACACCAGCAAGTGCAAGATTTATTGAAAGCATTACCATAACAGGCTTCATTTTTACTATTTTTTGGCTTCTACAATATGATGCCTGCCCAAAGACTTGTGAAATATGATTTTAGTTGTGAAAACTCACACATATATATAAGCTTAGGCTTTTTCCTGATAGGGAAATGGAAATGATTTAAAACAATGCAACTTGTATCAGAATATCTTAATGTTGTTATTTCATTCTTGTCTCTGCTGCTTCCTTTCTTTGGAACCTTTAACAGTCATATGTGTTGGAATAAGCTCATGAATCGTCACGACGCTGACGTTTGAAATACAGCACAGGTTTATAAGGACCAATATCGGCAAGGTTGTTCTAATCTCATGATGCCCTTCTTGTTAATCAATAGTGTTGAGCATCTTTGGAGAGTTAGAGGGAGATAGAGAAAGCTGGGGTAACTACAGCCTAGAAACCTTCTGTCTAATATCTTGGAATCAAATATTTTGCCTTAGAAACAATATAAAAATCCTCTCCCATTTATTATCTATTTCCATGGCACTTGAGGAACAACATGTCAAATCTCACAAAAAGATGTATAGTCACAAAGAAAGTAATGGATGCTTGGTAGATCTGATATATGCACTCCAAAAGGCTTAGTGGTTTCAACAAGAACTTGAAAATCAAAACACCACTGTCGTTTTCTAAGAAGCACGAATATAGACACACGGCACATATAAGACACAACACGAACAAGATGATATGTCATTTTTTAAAATCTAGAATGCATATAGATAAAGATACGTTTCTAAAAATATATATACCATTCTTTTTATAAGAAGGTATTTCAAATCCAACAAGTTTATGCATCTATATACTTAAATAGTGAATATAACCTATTCCATTCTCGTTTTATAATTATTGTCCTATATTACTATTTATGTTCGTCTATTATGCTTTACAAGTATTTGATACATGGCTAACAAATGCTGGATCCATATTTACTTTAGATAACTACTATTTGGCATACATGTACTATGATAACAAGTAGTGCCGGATACATGTCCGATAAGTGTTAGAGTGTATGAGCATTATCAAACATGGATACTGTTAGATGATATAATATTAAATTTACCTTCACCCTTTAGCTTAAGCTTTTGGGTCAATAAGTGATTTAACAAATACGTAACTCAAACTAAAGTGTTTATGCTTTTTAGGTGAAAATGATTGCCTCTAGTTCCATATGTGGCTCTAAAGTCAAATGTGTGCTTGCACTTAAAATATGAAGTGACATATTGAGGCAAAGTTGAGTGGTTGGCCCTGCAGGCTGCAATTATAAGTGCCCAAAATGATCTTTCCAAAAAAAACTATTATGATTCTGCAGTTCTTATGACAAGGCTTCTCCAAGATCCATACCTGAATCATAAAGCAACATACATATCATTATGTATTTTCATGAAGCTTTAAAACACTTGAAACGTGATCGGGATGCAGCGAAGCAGACTTCAAGATGTGGTATTTCGTTAACGATTTGA

mRNA sequence

ATGGAAGTGATAGAACGTCGTGACCTCGCGCTGGGAAATGCCAACCAGGTCCCGATTCCTCACGAAGCAACGAAATTCCATCTCTGGCCGAAGGCACGGGTACCACTTGCGCAATTTGTCGGTGCAGGAATCGTACGCGTGACACAGATCGTGAACAAGAGAATCGGACGATCGAAGCATGAGCGCAATCTCACTGAACGAAGAGCATTTCAATGTCCCGTTAGGGCTAATCCACGCAGAGTCTTTCGGTGCGCTCCAGTTCAACTTAGGGAAGACGGAACCTCCGAGGGAGGAAATCGAGTGTTTAACATCAGATTCAAGCTCCGGAAAGGAAGGAGGCGAAGTGGATTGCTCGGAATCATCATCGGATTCTTCTTTCAACTGGTAATCCTGTTCATCTTCGGGATTAATGACTCTATTGGGAAGAGCATCGTCGTTGGAGATGGAAAGTGGAAGGAGGAAAGGGCCAGAGTCGTCGAGAAGGTATTGAACGAAAGAAACTCTGGTTCTGAGTTAGGGCAGATGCGTGGGGAAGACGAAGGCGAGTGGTCTCGGATGCTTCAACTGTTTCACGAATTCTGTTTGTTTTCCCGGTTGCCGATCCGGGGCTCATTAGTGGCATTCCTTTGTAAAGAATCAAAATTAAGTTTCCTGAAATGCACACTAGAGTCCCAAGCACTTTGGCTATTCCACCCTTCCTTTTTATGTCCACTTTTTCCATTCTGGAAATATTTTGAAACCAAAGTTACTATCATCACATTTCAGTCAACATTACGAAAGAAAATGAACTATAGTTCTTTCGGCACGCACCGGAACAATACGGCTACTTTAAAACACTTGAAACGTGATCGGGATGCAGCGAAGCAGACTTCAAGATGTGGTATTTCGTTAACGATTTGA

Coding sequence (CDS)

ATGGAAGTGATAGAACGTCGTGACCTCGCGCTGGGAAATGCCAACCAGGTCCCGATTCCTCACGAAGCAACGAAATTCCATCTCTGGCCGAAGGCACGGGTACCACTTGCGCAATTTGTCGGTGCAGGAATCGTACGCGTGACACAGATCGTGAACAAGAGAATCGGACGATCGAAGCATGAGCGCAATCTCACTGAACGAAGAGCATTTCAATGTCCCGTTAGGGCTAATCCACGCAGAGTCTTTCGGTGCGCTCCAGTTCAACTTAGGGAAGACGGAACCTCCGAGGGAGGAAATCGAGTGTTTAACATCAGATTCAAGCTCCGGAAAGGAAGGAGGCGAAGTGGATTGCTCGGAATCATCATCGGATTCTTCTTTCAACTGGTAATCCTGTTCATCTTCGGGATTAATGACTCTATTGGGAAGAGCATCGTCGTTGGAGATGGAAAGTGGAAGGAGGAAAGGGCCAGAGTCGTCGAGAAGGTATTGAACGAAAGAAACTCTGGTTCTGAGTTAGGGCAGATGCGTGGGGAAGACGAAGGCGAGTGGTCTCGGATGCTTCAACTGTTTCACGAATTCTGTTTGTTTTCCCGGTTGCCGATCCGGGGCTCATTAGTGGCATTCCTTTGTAAAGAATCAAAATTAAGTTTCCTGAAATGCACACTAGAGTCCCAAGCACTTTGGCTATTCCACCCTTCCTTTTTATGTCCACTTTTTCCATTCTGGAAATATTTTGAAACCAAAGTTACTATCATCACATTTCAGTCAACATTACGAAAGAAAATGAACTATAGTTCTTTCGGCACGCACCGGAACAATACGGCTACTTTAAAACACTTGAAACGTGATCGGGATGCAGCGAAGCAGACTTCAAGATGTGGTATTTCGTTAACGATTTGA

Protein sequence

MEVIERRDLALGNANQVPIPHEATKFHLWPKARVPLAQFVGAGIVRVTQIVNKRIGRSKHERNLTERRAFQCPVRANPRRVFRCAPVQLREDGTSEGGNRVFNIRFKLRKGRRRSGLLGIIIGFFFQLVILFIFGINDSIGKSIVVGDGKWKEERARVVEKVLNERNSGSELGQMRGEDEGEWSRMLQLFHEFCLFSRLPIRGSLVAFLCKESKLSFLKCTLESQALWLFHPSFLCPLFPFWKYFETKVTIITFQSTLRKKMNYSSFGTHRNNTATLKHLKRDRDAAKQTSRCGISLTI
Homology
The following BLAST results are available for this feature:
BLAST of Lsi02G009320.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G009320.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G009320.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G009320.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi02G009320Lsi02G009320gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G009320.1.exon.1Lsi02G009320.1.exon.1exon
Lsi02G009320.1.exon.2Lsi02G009320.1.exon.2exon
Lsi02G009320.1.exon.3Lsi02G009320.1.exon.3exon
Lsi02G009320.1.exon.4Lsi02G009320.1.exon.4exon
Lsi02G009320.1.exon.5Lsi02G009320.1.exon.5exon
Lsi02G009320.1.exon.6Lsi02G009320.1.exon.6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G009320.1.CDS.1Lsi02G009320.1.CDS.1CDS
Lsi02G009320.1.CDS.2Lsi02G009320.1.CDS.2CDS
Lsi02G009320.1.CDS.3Lsi02G009320.1.CDS.3CDS
Lsi02G009320.1.CDS.4Lsi02G009320.1.CDS.4CDS
Lsi02G009320.1.CDS.5Lsi02G009320.1.CDS.5CDS
Lsi02G009320.1.CDS.6Lsi02G009320.1.CDS.6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi02G009320.1Lsi02G009320.1-proteinpolypeptide