Lsi01G004410.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G004410.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box family protein with a domain of Uncharacterized protein function
Locationchr01: 3679324 .. 3680589 (-)
Sequence length1266
RNA-Seq ExpressionLsi01G004410.1
SyntenyLsi01G004410.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTTACAAGCTTCATCTCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAATTACCCAAGCCGCAATTCACGTCCCAAAGCTTCCCAATCTCCGAATCTCATCAGCTCCCAAAATCCCGAAAACTTCCACTGCCTCCATTACAATGATTGAAGAACTCTGTTTAAACCAACCCATTATTAATGTGATTCCTACAGATTCCCCTTTCAAATCACAACTCCAAGCCATCTTAGACGCCGTAGCCGACCGGGTCGAAATGCACAACAACATCCGCCAACAGCGAGACAATTGGAATTCCCTTTTCCTTAATTCCATCAACATGATCACTCTCACCGCCTCCGCCCTCTCCGCCGCCGCACCCACCGTCGGTGCCCTCGGAGCTCCACTTTTGGCTCTGAAATTGTCCTCGGCTCTGCTTTTCTCTGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAAACCTTGATTATGGTTGGCACTCCCACTCAAATGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTAGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTACCACGCTTGAGCCGGCTTCGTGGTGGCCTACTTCTTCTAATGATTCCGAATCTCAGACGAAGAACGAAAAGGCCCATTTTGATGGAAAGCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTTGTTAAGACAAAAGACGCTGAAGACTATGAAAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCGTCCAGGGGGATGGTGGCGGCGGCGGCGGCCGGATCTTTGGCAGCCGCTGTGAATGCTCTGGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAACTCCGCCGGCTTCTTTGGGCTACTGGAAGAATCGATTAAAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGAGAAAACGGGGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAATCAGCTGCGGCTAGAGAAGAAGGGATTTCCATAGATGAATTTGCCAGCAAACTCTTTTGA

mRNA sequence

ATGGCTTCCTTACAAGCTTCATCTCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAATTACCCAAGCCGCAATTCACGTCCCAAAGCTTCCCAATCTCCGAATCTCATCAGCTCCCAAAATCCCGAAAACTTCCACTGCCTCCATTACAATGATTGAAGAACTCTGTTTAAACCAACCCATTATTAATGTGATTCCTACAGATTCCCCTTTCAAATCACAACTCCAAGCCATCTTAGACGCCGTAGCCGACCGGGTCGAAATGCACAACAACATCCGCCAACAGCGAGACAATTGGAATTCCCTTTTCCTTAATTCCATCAACATGATCACTCTCACCGCCTCCGCCCTCTCCGCCGCCGCACCCACCGTCGGTGCCCTCGGAGCTCCACTTTTGGCTCTGAAATTGTCCTCGGCTCTGCTTTTCTCTGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAAACCTTGATTATGGTTGGCACTCCCACTCAAATGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTAGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTACCACGCTTGAGCCGGCTTCGTGGTGGCCTACTTCTTCTAATGATTCCGAATCTCAGACGAAGAACGAAAAGGCCCATTTTGATGGAAAGCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTTGTTAAGACAAAAGACGCTGAAGACTATGAAAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCGTCCAGGGGGATGGTGGCGGCGGCGGCGGCCGGATCTTTGGCAGCCGCTGTGAATGCTCTGGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAACTCCGCCGGCTTCTTTGGGCTACTGGAAGAATCGATTAAAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGAGAAAACGGGGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAATCAGCTGCGGCTAGAGAAGAAGGGATTTCCATAGATGAATTTGCCAGCAAACTCTTTTGA

Coding sequence (CDS)

ATGGCTTCCTTACAAGCTTCATCTCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAATTACCCAAGCCGCAATTCACGTCCCAAAGCTTCCCAATCTCCGAATCTCATCAGCTCCCAAAATCCCGAAAACTTCCACTGCCTCCATTACAATGATTGAAGAACTCTGTTTAAACCAACCCATTATTAATGTGATTCCTACAGATTCCCCTTTCAAATCACAACTCCAAGCCATCTTAGACGCCGTAGCCGACCGGGTCGAAATGCACAACAACATCCGCCAACAGCGAGACAATTGGAATTCCCTTTTCCTTAATTCCATCAACATGATCACTCTCACCGCCTCCGCCCTCTCCGCCGCCGCACCCACCGTCGGTGCCCTCGGAGCTCCACTTTTGGCTCTGAAATTGTCCTCGGCTCTGCTTTTCTCTGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAAACCTTGATTATGGTTGGCACTCCCACTCAAATGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTAGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTACCACGCTTGAGCCGGCTTCGTGGTGGCCTACTTCTTCTAATGATTCCGAATCTCAGACGAAGAACGAAAAGGCCCATTTTGATGGAAAGCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTTGTTAAGACAAAAGACGCTGAAGACTATGAAAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCGTCCAGGGGGATGGTGGCGGCGGCGGCGGCCGGATCTTTGGCAGCCGCTGTGAATGCTCTGGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAACTCCGCCGGCTTCTTTGGGCTACTGGAAGAATCGATTAAAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGAGAAAACGGGGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAATCAGCTGCGGCTAGAGAAGAAGGGATTTCCATAGATGAATTTGCCAGCAAACTCTTTTGA

Protein sequence

MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQPIINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAAPTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTKNEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPVLTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKLF
Homology
BLAST of Lsi01G004410.1 vs. ExPASy Swiss-Prot
Match: O65451 (Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.6e-95
Identity = 220/445 (49.44%), Postives = 291/445 (65.39%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQAS  +  +S S  T T++AI +PKLP   + S P+IP  +           + +P
Sbjct: 1   MASLQASRFMLTTSCSSCTRTRSAISIPKLPKFNV-SIPQIPIKN-------RNFRVEEP 60

Query: 61  IINV--IPTDSPF-------------------KSQLQAILDAVADRVEMHNNIRQQRDNW 120
           I+ +     D                      +S+L A+L+ V DRVEMH NI +QR+NW
Sbjct: 61  ILRLDGFAEDLDLSLSERQRQKKRGCDDQVLQRSRLMAVLEEVIDRVEMHKNIGEQRNNW 120

Query: 121 NSLFLNSINMITLTASALSAAAPTVGALGA-PLLALKLSSALLFSAATGMLVMVNKIQPS 180
           NSL LNS+NMITLTA AL A   ++ A G   + A+ ++S +L ++ATG+  ++NKIQPS
Sbjct: 121 NSLLLNSVNMITLTA-ALMAGIASMNASGIDSVSAVSIASTVLLASATGLAALMNKIQPS 180

Query: 181 QLAEEQRNAARLFKQLQTQIQTLIMVGTP---TQMDVDSAMEKVLALDKAYPLPLLGVML 240
           QL EEQRNA RLFKQL+ +I+ ++   +    ++ DV  A+++VL LDKAYPLPL+G ML
Sbjct: 181 QLVEEQRNATRLFKQLRNRIEMVLREKSEDGISEEDVKEAIKRVLCLDKAYPLPLVGTML 240

Query: 241 EKFPTTLEPASWWPTSSNDSESQTKNEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTK 300
           EKFP   +PA+WWP        +TK E  H     R  +NGW+ +LE EMREVVEV+K++
Sbjct: 241 EKFPQEFKPATWWP--------ETKPEPTH----SRTEANGWNSELEMEMREVVEVIKSR 300

Query: 301 DAEDYERLGNLVLKVNKTLAISGPVLTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNA 360
           DAE+YE+LGN+ LK+N+ LAISGPVLTGIAA+SS F+G  S    V A    SLAA VN 
Sbjct: 301 DAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSSGFIGHGSGLAGVVATTCASLAAVVNT 360

Query: 361 LEHGGQIGMVFEMYRNSAGFFGLLEESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQ 420
           LEHGGQ+GMV EMYRNSAGFF L+E++IK        E+RENG+VFE KVALKLGRSLS+
Sbjct: 361 LEHGGQVGMVVEMYRNSAGFFSLMEDTIK-------TERRENGQVFETKVALKLGRSLSE 417

BLAST of Lsi01G004410.1 vs. ExPASy TrEMBL
Match: A0A0A0KN03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.2e-190
Identity = 365/421 (86.70%), Postives = 393/421 (93.35%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQA SL SAS SSR +IT+AAIH+PKLPNL+I SAPK+PKTST S+ MIE+LCLNQP
Sbjct: 1   MASLQALSLFSASPSSRTSITKAAIHIPKLPNLKI-SAPKLPKTSTPSVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           IINVIPT+SP KSQL+AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+
Sbjct: 61  IINVIPTESPLKSQLRAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKMSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G  TQMDVDSAMEKVLALDKAYPLPLLG MLEKFP T++PASWWP SS + ESQ K
Sbjct: 181 LILDGALTQMDVDSAMEKVLALDKAYPLPLLGAMLEKFPKTVKPASWWPNSSENYESQAK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           N+  HFDGKQ + SNGWSD+LEAEMREVVE+VK+ DAEDY RLGNLVLKVNKTLAI+GPV
Sbjct: 241 NKNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAALSSAFVGDWSS GMV AAAAGSLAAAVN LEHGGQIGMVFEMYRN+AGFFGLLE
Sbjct: 301 LTGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFEMYRNTAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAREEGISIDEFASKL
Sbjct: 361 ESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAREEGISIDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. ExPASy TrEMBL
Match: A0A5D3CM83 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006350 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 2.3e-187
Identity = 360/421 (85.51%), Postives = 389/421 (92.40%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASL++ SL SAS SS+ + T A+IH+PKLPNLRI SA K+PKTSTAS+ MIE+LCLNQP
Sbjct: 1   MASLRSLSLFSASHSSKTSTTNASIHIPKLPNLRI-SATKLPKTSTASVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           IINVIPT+SP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSIN+ITLTASAL+A+
Sbjct: 61  IINVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINLITLTASALAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFP T EPASWWP SS + ESQTK
Sbjct: 181 LILDGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTFEPASWWPNSSENYESQTK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           NE  + D KQ + SNGWSD+LEAEMREV E+VK+KDAEDY RLGNLVLKVNK LA SGPV
Sbjct: 241 NENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLVLKVNKILATSGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           L+GIAALSSAFVGDWSS GM  AAAAGSLAAAVNALEHGGQIGMVFEMYRN+AGFFGLLE
Sbjct: 301 LSGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEEK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGIS+DEFASKL
Sbjct: 361 ESIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. ExPASy TrEMBL
Match: A0A0A0KL68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 7.4e-186
Identity = 355/421 (84.32%), Postives = 386/421 (91.69%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQ+  L SAS SS+ + T A++H+PKLPNLRI SAPK+PKTST S+ MIE+LCLNQP
Sbjct: 1   MASLQSLPLFSASHSSKTSTTNASLHIPKLPNLRI-SAPKLPKTSTPSVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           I+NVIPT+SP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+
Sbjct: 61  ILNVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G PTQ+DVDSAM+KVLA+DKAYPLPLLG MLEKFP T+EPASWWP SS + ESQTK
Sbjct: 181 LILDGAPTQVDVDSAMKKVLAIDKAYPLPLLGAMLEKFPKTVEPASWWPNSSENYESQTK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           N   HFDGKQ + SNGWS +LEAEMREVVE+VK+KDAEDY RLGNLVLKVNKTLAI+GPV
Sbjct: 241 NGNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLVLKVNKTLAITGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAALSSAFVGDWSS GM  AA AGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE
Sbjct: 301 LTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTL EK+WEKRENGEVFERKVALK GRSLSQLRQLATKSAAAREEG S+DEFASKL
Sbjct: 361 ESIRGTLGEKEWEKRENGEVFERKVALKFGRSLSQLRQLATKSAAAREEGFSMDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. ExPASy TrEMBL
Match: A0A6J1IPN6 (probable F-box protein At4g22030 OS=Cucurbita maxima OX=3661 GN=LOC111477679 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 5.3e-184
Identity = 356/421 (84.56%), Postives = 381/421 (90.50%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQAS LL    SSR+TITQA+IHVPKLPNLRI S P++PKTSTAS+ +IE+LCLNQP
Sbjct: 1   MASLQASFLL---PSSRKTITQASIHVPKLPNLRI-SVPRLPKTSTASLKLIEDLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           +  + PT SP  S L AILD VADRVEMHNNI QQRDNWNSL LNSINMITL AS ++A 
Sbjct: 61  LNIIPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLLLNSINMITLAASVMAAT 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VGALGAPLLA KLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT
Sbjct: 121 APAVGALGAPLLAFKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI VG PTQ DVDSAMEKVLALDKAYPLPLLGVMLEKFP  LEPASWWP SS+  ES+T+
Sbjct: 181 LITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTE 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           NE +HFDG QRQGSNGWSDQLEAEMREVVEVVKTKDA+DY RLGN+VLKVNKTLAISGP+
Sbjct: 241 NENSHFDGNQRQGSNGWSDQLEAEMREVVEVVKTKDAQDYVRLGNIVLKVNKTLAISGPL 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAAL SAFVGDWSS GMV AAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFG++E
Sbjct: 301 LTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVME 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEE DWEKRENG+VFERKVALKLGRSLSQLRQLA KS+AAR+EGIS+DEFASKL
Sbjct: 361 ESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSSAARQEGISMDEFASKL 417

Query: 421 F 422
           F
Sbjct: 421 F 417

BLAST of Lsi01G004410.1 vs. ExPASy TrEMBL
Match: A0A6J1GFH9 (probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453472 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.2e-182
Identity = 354/421 (84.09%), Postives = 380/421 (90.26%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQ S LL    SSR+TITQA+IHVPKLP+LR+ S P++PKTSTAS+ +IEELCLNQP
Sbjct: 1   MASLQPSFLL---PSSRKTITQASIHVPKLPSLRV-SVPRLPKTSTASLKLIEELCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           +  V PT SP  S L AILD VADRVEMHNNI QQRDNWNSLFLNSINMITL AS ++A 
Sbjct: 61  LNIVPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAAT 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VGALGAPLLALK SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT
Sbjct: 121 APAVGALGAPLLALKFSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI VG PTQ DVDSAMEKVLALD+AYPLPLLGVMLEKFP  LEPASWWP SS+  ES+T+
Sbjct: 181 LITVGAPTQRDVDSAMEKVLALDRAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTE 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           NE AHFDG QRQGSNGWSDQLEAEMREVVEV+KTKDA DY RLGNLVLKV+K+LAISGP+
Sbjct: 241 NENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDARDYARLGNLVLKVHKSLAISGPL 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAAL SAFVGDWSS GMV AAAAGSLAAA+NALEHGGQIGMVFEMYRNSAGFFG++E
Sbjct: 301 LTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAMNALEHGGQIGMVFEMYRNSAGFFGVME 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEE +WEKRENGEVFERKVALKLGRSLSQLRQLA KSAAAR+EGIS+DEFASKL
Sbjct: 361 ESIRGTLEETNWEKRENGEVFERKVALKLGRSLSQLRQLAAKSAAARQEGISMDEFASKL 417

Query: 421 F 422
           F
Sbjct: 421 F 417

BLAST of Lsi01G004410.1 vs. NCBI nr
Match: XP_038883638.1 (probable F-box protein At4g22030 [Benincasa hispida])

HSP 1 Score: 707.6 bits (1825), Expect = 6.4e-200
Identity = 389/422 (92.18%), Postives = 403/422 (95.50%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSR-RTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQ 60
           MASLQASSLL ASSSSR R I+QAAIHVPKLPNLRI SA ++ KTSTAS+ MIEELCLNQ
Sbjct: 1   MASLQASSLLLASSSSRTRRISQAAIHVPKLPNLRI-SASRLSKTSTASVKMIEELCLNQ 60

Query: 61  PIINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSA 120
           PIINVIP++SPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSA
Sbjct: 61  PIINVIPSESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSA 120

Query: 121 AAPTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ 180
           AAP VGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK LQ+QIQ
Sbjct: 121 AAPAVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKLLQSQIQ 180

Query: 181 TLIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQT 240
           +LIM G PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFP TLEPASWWP SSND ESQT
Sbjct: 181 SLIMTGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTLEPASWWPNSSNDYESQT 240

Query: 241 KNEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGP 300
           K+EKAHFDGKQR+ SNGWSD+LEAEMREVVE+VKTKDAEDY RLGNLVLKVNKTLAISGP
Sbjct: 241 KDEKAHFDGKQRRDSNGWSDELEAEMREVVEIVKTKDAEDYVRLGNLVLKVNKTLAISGP 300

Query: 301 VLTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLL 360
           VLTG+AALSSAFVGDWSS GMV AAAAGSLAAAVNALEHGGQ+GMVFEMYRNSAGFFGLL
Sbjct: 301 VLTGLAALSSAFVGDWSSAGMVVAAAAGSLAAAVNALEHGGQVGMVFEMYRNSAGFFGLL 360

Query: 361 EESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASK 420
           EESIKGTLEEKDWEKRENG VFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASK
Sbjct: 361 EESIKGTLEEKDWEKRENGHVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASK 420

Query: 421 LF 422
           LF
Sbjct: 421 LF 421

BLAST of Lsi01G004410.1 vs. NCBI nr
Match: XP_004134976.2 (probable F-box protein At4g22030 [Cucumis sativus])

HSP 1 Score: 674.9 bits (1740), Expect = 4.6e-190
Identity = 365/421 (86.70%), Postives = 393/421 (93.35%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQA SL SAS SSR +IT+AAIH+PKLPNL+I SAPK+PKTST S+ MIE+LCLNQP
Sbjct: 1   MASLQALSLFSASPSSRTSITKAAIHIPKLPNLKI-SAPKLPKTSTPSVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           IINVIPT+SP KSQL+AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+
Sbjct: 61  IINVIPTESPLKSQLRAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKMSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G  TQMDVDSAMEKVLALDKAYPLPLLG MLEKFP T++PASWWP SS + ESQ K
Sbjct: 181 LILDGALTQMDVDSAMEKVLALDKAYPLPLLGAMLEKFPKTVKPASWWPNSSENYESQAK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           N+  HFDGKQ + SNGWSD+LEAEMREVVE+VK+ DAEDY RLGNLVLKVNKTLAI+GPV
Sbjct: 241 NKNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAALSSAFVGDWSS GMV AAAAGSLAAAVN LEHGGQIGMVFEMYRN+AGFFGLLE
Sbjct: 301 LTGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFEMYRNTAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAREEGISIDEFASKL
Sbjct: 361 ESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAREEGISIDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. NCBI nr
Match: TYK13033.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 664.8 bits (1714), Expect = 4.8e-187
Identity = 360/421 (85.51%), Postives = 389/421 (92.40%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASL++ SL SAS SS+ + T A+IH+PKLPNLRI SA K+PKTSTAS+ MIE+LCLNQP
Sbjct: 1   MASLRSLSLFSASHSSKTSTTNASIHIPKLPNLRI-SATKLPKTSTASVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           IINVIPT+SP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSIN+ITLTASAL+A+
Sbjct: 61  IINVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINLITLTASALAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFP T EPASWWP SS + ESQTK
Sbjct: 181 LILDGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTFEPASWWPNSSENYESQTK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           NE  + D KQ + SNGWSD+LEAEMREV E+VK+KDAEDY RLGNLVLKVNK LA SGPV
Sbjct: 241 NENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLVLKVNKILATSGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           L+GIAALSSAFVGDWSS GM  AAAAGSLAAAVNALEHGGQIGMVFEMYRN+AGFFGLLE
Sbjct: 301 LSGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEEK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGIS+DEFASKL
Sbjct: 361 ESIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. NCBI nr
Match: XP_004134771.3 (probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical protein Csa_003076 [Cucumis sativus])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 356/421 (84.56%), Postives = 387/421 (91.92%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQ+  L SAS SS+ + T A++H+PKLPNLRI SAPK+PKTST S+ MIE+LCLNQP
Sbjct: 1   MASLQSLPLFSASHSSKTSTTNASLHIPKLPNLRI-SAPKLPKTSTPSVKMIEQLCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           I+NVIPT+SP KSQL AIL+AVADRVEMHNNI QQRDNWNSLFLNSINMITLTASAL+A+
Sbjct: 61  ILNVIPTESPLKSQLHAILEAVADRVEMHNNICQQRDNWNSLFLNSINMITLTASALAAS 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VG+LGAPLLALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQ+
Sbjct: 121 APAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQS 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI+ G PTQ+DVDSAM+KVLA+DKAYPLPLLG MLEKFP T+EPASWWP SS + ESQTK
Sbjct: 181 LILDGAPTQVDVDSAMKKVLAIDKAYPLPLLGAMLEKFPKTVEPASWWPNSSENYESQTK 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           N   HFDGKQ + SNGWS +LEAEMREVVE+VK+KDAEDY RLGNLVLKVNKTLAI+GPV
Sbjct: 241 NGNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLVLKVNKTLAITGPV 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAALSSAFVGDWSS GM  AA AGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE
Sbjct: 301 LTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTL EK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEG S+DEFASKL
Sbjct: 361 ESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDEFASKL 420

Query: 421 F 422
           F
Sbjct: 421 F 420

BLAST of Lsi01G004410.1 vs. NCBI nr
Match: XP_023544014.1 (probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 361/421 (85.75%), Postives = 382/421 (90.74%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQAS LL    SSR+TITQA+IHVPKLPNLRI S P++PKTSTAS+ +IEELCLNQP
Sbjct: 1   MASLQASFLL---PSSRKTITQASIHVPKLPNLRI-SVPRLPKTSTASLKLIEELCLNQP 60

Query: 61  IINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
           +  + PT SP  S L AILD VADRVEMHNNI QQRDNWNSLFLNSINMITL AS ++A 
Sbjct: 61  LNIIPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAAT 120

Query: 121 APTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180
           AP VGALGAPLL LKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT
Sbjct: 121 APAVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQT 180

Query: 181 LIMVGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSESQTK 240
           LI VG PTQ DVDSAMEKVLALDKAYPLPLLGVMLEKFP  LEPASWWP SS+  ES+T+
Sbjct: 181 LITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQ 240

Query: 241 NEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAISGPV 300
           NE AHFDG QRQGSNGWSDQLEAEMREVVEV+KTKDA+DY RLGNLVLKVNKTLAISGP+
Sbjct: 241 NENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPL 300

Query: 301 LTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLE 360
           LTGIAAL SAFVGDWSS GMV AAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFG++E
Sbjct: 301 LTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVME 360

Query: 361 ESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
           ESI+GTLEE DWEKRENG+VFERKVALKLGRSLSQLRQLA KSAAAR+EGISIDEFASKL
Sbjct: 361 ESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKL 417

Query: 421 F 422
           F
Sbjct: 421 F 417

BLAST of Lsi01G004410.1 vs. TAIR 10
Match: AT4G04480.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-99
Identity = 220/424 (51.89%), Postives = 292/424 (68.87%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTST--ASITMIEELCLN 60
           MASLQ S L+ +SSSS  T  +AA+ +PKLP   + S PKIP  S    S   +E L L+
Sbjct: 1   MASLQVSRLVLSSSSS-STRPKAAVSIPKLPKFHV-SVPKIPTLSVKEPSFEFVESLPLS 60

Query: 61  QPIINVIPTDSPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALS 120
             +     +DS  +++L A+L+ V DR+EMH NI  QR+NWNSL LNS+NMITLTA+ ++
Sbjct: 61  --LKQKRGSDSIQRTRLNAVLEEVMDRIEMHKNIGDQRNNWNSLLLNSVNMITLTAALMA 120

Query: 121 AAAPTVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQI 180
             A   G     + A+K++S +L ++ATG   +++KIQPSQLAEEQRNA RLFK+L+ +I
Sbjct: 121 GIASVNGHGVDSVTAVKIASTVLLTSATGFAALMSKIQPSQLAEEQRNATRLFKKLRVEI 180

Query: 181 QTLIMVGTP-TQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPTTLEPASWWPTSSNDSES 240
           +  +       + DV   +++VL+LDKAYPLPL+G MLEKFP   +PA+WWP      E+
Sbjct: 181 EMFLRENEEIEEEDVKEVIKRVLSLDKAYPLPLIGTMLEKFPEEFKPATWWP------EN 240

Query: 241 QTKNEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTKDAEDYERLGNLVLKVNKTLAIS 300
           + KN K          +NGWS +LEAEMREV  VVK++DAE+YE+LG++ LK+N+ LAIS
Sbjct: 241 KEKNPKTSL-------ANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVALKLNRFLAIS 300

Query: 301 GPVLTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFG 360
           GPVLTG++A+SS F+G  S    + A    SLAA VN LEHGGQ+GMVFEMYRNSAGFF 
Sbjct: 301 GPVLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFEMYRNSAGFFS 360

Query: 361 LLEESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFA 420
           LLEE++K T      EKRENG+VFE +VA+KLGRSLS+LR LA +S  ++   +   EFA
Sbjct: 361 LLEETMKST------EKRENGQVFETRVAVKLGRSLSELRDLAKRSNLSQ---VKAKEFA 398

Query: 421 SKLF 422
           SKLF
Sbjct: 421 SKLF 398

BLAST of Lsi01G004410.1 vs. TAIR 10
Match: AT4G22030.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 349.0 bits (894), Expect = 5.4e-96
Identity = 220/445 (49.44%), Postives = 291/445 (65.39%), Query Frame = 0

Query: 1   MASLQASSLLSASSSSRRTITQAAIHVPKLPNLRISSAPKIPKTSTASITMIEELCLNQP 60
           MASLQAS  +  +S S  T T++AI +PKLP   + S P+IP  +           + +P
Sbjct: 1   MASLQASRFMLTTSCSSCTRTRSAISIPKLPKFNV-SIPQIPIKN-------RNFRVEEP 60

Query: 61  IINV--IPTDSPF-------------------KSQLQAILDAVADRVEMHNNIRQQRDNW 120
           I+ +     D                      +S+L A+L+ V DRVEMH NI +QR+NW
Sbjct: 61  ILRLDGFAEDLDLSLSERQRQKKRGCDDQVLQRSRLMAVLEEVIDRVEMHKNIGEQRNNW 120

Query: 121 NSLFLNSINMITLTASALSAAAPTVGALGA-PLLALKLSSALLFSAATGMLVMVNKIQPS 180
           NSL LNS+NMITLTA AL A   ++ A G   + A+ ++S +L ++ATG+  ++NKIQPS
Sbjct: 121 NSLLLNSVNMITLTA-ALMAGIASMNASGIDSVSAVSIASTVLLASATGLAALMNKIQPS 180

Query: 181 QLAEEQRNAARLFKQLQTQIQTLIMVGTP---TQMDVDSAMEKVLALDKAYPLPLLGVML 240
           QL EEQRNA RLFKQL+ +I+ ++   +    ++ DV  A+++VL LDKAYPLPL+G ML
Sbjct: 181 QLVEEQRNATRLFKQLRNRIEMVLREKSEDGISEEDVKEAIKRVLCLDKAYPLPLVGTML 240

Query: 241 EKFPTTLEPASWWPTSSNDSESQTKNEKAHFDGKQRQGSNGWSDQLEAEMREVVEVVKTK 300
           EKFP   +PA+WWP        +TK E  H     R  +NGW+ +LE EMREVVEV+K++
Sbjct: 241 EKFPQEFKPATWWP--------ETKPEPTH----SRTEANGWNSELEMEMREVVEVIKSR 300

Query: 301 DAEDYERLGNLVLKVNKTLAISGPVLTGIAALSSAFVGDWSSRGMVAAAAAGSLAAAVNA 360
           DAE+YE+LGN+ LK+N+ LAISGPVLTGIAA+SS F+G  S    V A    SLAA VN 
Sbjct: 301 DAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSSGFIGHGSGLAGVVATTCASLAAVVNT 360

Query: 361 LEHGGQIGMVFEMYRNSAGFFGLLEESIKGTLEEKDWEKRENGEVFERKVALKLGRSLSQ 420
           LEHGGQ+GMV EMYRNSAGFF L+E++IK        E+RENG+VFE KVALKLGRSLS+
Sbjct: 361 LEHGGQVGMVVEMYRNSAGFFSLMEDTIK-------TERRENGQVFETKVALKLGRSLSE 417

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O654517.6e-9549.44Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE... [more]
Match NameE-valueIdentityDescription
A0A0A0KN032.2e-19086.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1[more]
A0A5D3CM832.3e-18785.51Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A0A0KL687.4e-18684.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1[more]
A0A6J1IPN65.3e-18484.56probable F-box protein At4g22030 OS=Cucurbita maxima OX=3661 GN=LOC111477679 PE=... [more]
A0A6J1GFH92.2e-18284.09probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453472 P... [more]
Match NameE-valueIdentityDescription
XP_038883638.16.4e-20092.18probable F-box protein At4g22030 [Benincasa hispida][more]
XP_004134976.24.6e-19086.70probable F-box protein At4g22030 [Cucumis sativus][more]
TYK13033.14.8e-18785.51putative F-box protein [Cucumis melo var. makuwa][more]
XP_004134771.31.5e-18584.56probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical pr... [more]
XP_023544014.11.5e-18585.75probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G04480.11.4e-9951.89unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXP... [more]
AT4G22030.15.4e-9649.44F-box family protein with a domain of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027949Petal formation-expressedPFAMPF14476Chloroplast_dufcoord: 74..397
e-value: 8.2E-150
score: 498.2
IPR027949Petal formation-expressedPANTHERPTHR33358F-BOX PROTEIN WITH A DOMAIN PROTEINcoord: 13..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..258
NoneNo IPR availablePANTHERPTHR33358:SF3PLANT-LIKE PROTEIN, PUTATIVE-RELATEDcoord: 13..421

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi01G004410Lsi01G004410gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi01G004410.1.exon.1Lsi01G004410.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi01G004410.1.CDS.1Lsi01G004410.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi01G004410.1Lsi01G004410.1-proteinpolypeptide