Lsi01G001110.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G001110.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LOB domain-containing protein
Location	chr01: 1153248 .. 1153679 (-)
Sequence length	432
RNA-Seq Expression	Lsi01G001110.1
Synteny	Lsi01G001110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACATAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTGATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCAGAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGGTGAATCGTCTAAGTCAACTGCCAATGACAGAGGGTCAATCATCATCAAGTCAACGGCTTGA

mRNA sequence

ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACATAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTGATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCAGAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGGTGAATCGTCTAAGTCAACTGCCAATGACAGAGGGTCAATCATCATCAAGTCAACGGCTTGA

Coding sequence (CDS)

ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACATAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTGATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCAGAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGGTGAATCGTCTAAGTCAACTGCCAATGACAGAGGGTCAATCATCATCAAGTCAACGGCTTGA

Protein sequence

MAHHVQHVNLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSEPKDVNILPLRWPGESSKSTANDRGSIIIKSTA

Homology

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-27
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA
Sbjct: 14  LRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSLFYEAEA 73

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV 109
              DPV+GCVG I ILQ RL  +  +L  A++EL+TYV
Sbjct: 74  RLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV 111

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-26
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 16  LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADM 75

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Sbjct: 76  RLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 40  LRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAYEADM 99

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSEPKDVNILP 120
              DPV+GCVG I ILQ  L  LQ +L+ A+ ELS Y  +     +  P
Sbjct: 100 RLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAP 148

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 45  LRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADM 104

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Sbjct: 105 RLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 45  LRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADM 104

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Sbjct: 105 RLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.7e-29
Identity = 75/128 (58.59%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA
Sbjct: 22  LRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEA 81

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE-PKD-----VNILPLRWPG 130
              DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ SE P +      + LP  W  
Sbjct: 82  RLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSC 141

Query: 131 ESSKSTAN 133
            +SK   N
Sbjct: 142 MASKLRPN 149

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.7e-29
Identity = 75/128 (58.59%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA
Sbjct: 22  LRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEA 81

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE-PKD-----VNILPLRWPG 130
              DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ SE P +      + LP  W  
Sbjct: 82  RLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSY 141

Query: 131 ESSKSTAN 133
            +SK   N
Sbjct: 142 MASKLRPN 149

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL
Match: A0A6J1CZR4 (LOB domain-containing protein 36-like OS=Momordica charantia OX=3673 GN=LOC111015703 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.7e-28
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 9   NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEA 68
           N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEA
Sbjct: 19  NYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEA 78

Query: 69  EAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE 112
           EA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+ SE
Sbjct: 79  EARRIDPVYGCVGFISILDDRLKRIQSDLVDAKRELSIYLGSE 121

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL
Match: A0A151RZM5 (LOB domain-containing protein 36 OS=Cajanus cajan OX=3821 GN=KK1_030347 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 10  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAE 69
           LLRRKC  +C+FA +FP D  Q+F  VHR++GASNV KLLN+L+  +R+ A KSL YEAE
Sbjct: 13  LLRRKCTQECVFAPYFPPDNPQRFACVHRVFGASNVAKLLNELSMAQREDAVKSLAYEAE 72

Query: 70  AWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSEPKDV-----NILPLRWPG 129
           A   DPV+GCVGFI +LQ+RL  +QTEL  A++ELSTYV  +   V      +LP   P 
Sbjct: 73  ARLRDPVYGCVGFISLLQQRLRQIQTELHNAKKELSTYVSPQAMQVLLANPGMLPPMLPH 132

Query: 130 ESSKSTANDRG 136
              +S  N+ G
Sbjct: 133 LHHQSMFNNCG 143

[Close]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL
Match: A0A427AY91 (LOB domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00011391 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 10  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAE 69
           LLRRKC P+CIFA HFP DQ  KF  VHR++GASNV KLL QL  ++R+ A  SL YEAE
Sbjct: 13  LLRRKCTPECIFAPHFPPDQPAKFAKVHRVFGASNVAKLLKQLRPEQREDAVVSLSYEAE 72

Query: 70  AWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV 109
           A   DPVHGCVG+I +LQ +L ++Q +LS A+RELSTY+
Sbjct: 73  ARLRDPVHGCVGYIYLLQHKLKEVQHDLSNAKRELSTYI 111

[Close]

BLAST of Lsi01G001110.1 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 89/107 (83.18%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKCLPDCIFA HFPADQ +KFEA+H IYGASNV KLLNQL+ DERD+AAKSLIYEAEA
Sbjct: 27  LRRKCLPDCIFAPHFPADQPKKFEAIHTIYGASNVSKLLNQLSYDERDKAAKSLIYEAEA 86

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE-PKDVN 117
           WQ DPVHGCVGFI ILQKRLN+LQ EL+IARRELSTY+VSE P+D N
Sbjct: 87  WQRDPVHGCVGFISILQKRLNELQIELAIARRELSTYIVSEAPQDAN 133

[Close]

BLAST of Lsi01G001110.1 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 75/128 (58.59%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA
Sbjct: 22  LRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEA 81

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE-PKD-----VNILPLRWPG 130
              DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ SE P +      + LP  W  
Sbjct: 82  RLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSY 141

Query: 131 ESSKSTAN 133
            +SK   N
Sbjct: 142 MASKLRPN 149

[Close]

BLAST of Lsi01G001110.1 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 75/128 (58.59%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA
Sbjct: 22  LRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEA 81

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE-PKD-----VNILPLRWPG 130
              DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ SE P +      + LP  W  
Sbjct: 82  RLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSC 141

Query: 131 ESSKSTAN 133
            +SK   N
Sbjct: 142 MASKLRPN 149

[Close]

BLAST of Lsi01G001110.1 vs. NCBI nr
Match: XP_022146502.1 (LOB domain-containing protein 36-like [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-28
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 9   NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEA 68
           N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEA
Sbjct: 19  NYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEA 78

Query: 69  EAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSE 112
           EA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+ SE
Sbjct: 79  EARRIDPVYGCVGFISILDDRLKRIQSDLVDAKRELSIYLGSE 121

[Close]

BLAST of Lsi01G001110.1 vs. NCBI nr
Match: XP_020234471.1 (LOB domain-containing protein 36 [Cajanus cajan])

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-27
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 10  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAE 69
           LLRRKC  +C+FA +FP D  Q+F  VHR++GASNV KLLN+L+  +R+ A KSL YEAE
Sbjct: 13  LLRRKCTQECVFAPYFPPDNPQRFACVHRVFGASNVAKLLNELSMAQREDAVKSLAYEAE 72

Query: 70  AWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVSEPKDV-----NILPLRWPG 129
           A   DPV+GCVGFI +LQ+RL  +QTEL  A++ELSTYV  +   V      +LP   P 
Sbjct: 73  ARLRDPVYGCVGFISLLQQRLRQIQTELHNAKKELSTYVSPQAMQVLLANPGMLPPMLPH 132

Query: 130 ESSKSTANDRG 136
              +S  N+ G
Sbjct: 133 LHHQSMFNNCG 143

[Close]

BLAST of Lsi01G001110.1 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-28
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA
Sbjct: 14  LRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSLFYEAEA 73

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV 109
              DPV+GCVG I ILQ RL  +  +L  A++EL+TYV
Sbjct: 74  RLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV 111

[Close]

BLAST of Lsi01G001110.1 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 16  LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADM 75

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Sbjct: 76  RLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Lsi01G001110.1 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 16  LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADM 75

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Sbjct: 76  RLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Lsi01G001110.1 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 16  LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADM 75

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Sbjct: 76  RLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of Lsi01G001110.1 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 11  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEA 70
           LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+ 
Sbjct: 16  LRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADM 75

Query: 71  WQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY 108
              DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Sbjct: 76  RLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

The following BLAST results are available for this feature:

BLAST of Lsi01G001110.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKZ3	3.9e-27	58.16	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
O04479	3.3e-26	56.70	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.3e-25	52.29	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	4.8e-25	56.70	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	4.8e-25	56.70	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Lsi01G001110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQL4	9.7e-29	58.59	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AYN9	9.7e-29	58.59	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE...	[more]
A0A6J1CZR4	3.7e-28	61.17	LOB domain-containing protein 36-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A151RZM5	1.1e-27	51.91	LOB domain-containing protein 36 OS=Cajanus cajan OX=3821 GN=KK1_030347 PE=3 SV=...	[more]
A0A427AY91	1.4e-27	62.63	LOB domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00011391 PE=...	[more]

BLAST of Lsi01G001110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881578.1	1.4e-42	83.18	protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]	[more]
XP_008439580.1	2.0e-28	58.59	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
KAA0052511.1	2.0e-28	58.59	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB...	[more]
XP_022146502.1	7.6e-28	61.17	LOB domain-containing protein 36-like [Momordica charantia]	[more]
XP_020234471.1	2.2e-27	51.91	LOB domain-containing protein 36 [Cajanus cajan]	[more]

BLAST of Lsi01G001110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66870.1	2.8e-28	58.16	ASYMMETRIC LEAVES 2-like 1	[more]
AT1G65620.1	2.4e-27	56.70	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	2.4e-27	56.70	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	2.4e-27	56.70	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	2.4e-27	56.70	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..103
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 10..112
None	No IPR available	PANTHER	PTHR31301:SF68	LOB DOMAIN-CONTAINING PROTEIN 32-RELATED	coord: 10..112
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..100 e-value: 6.7E-32 score: 110.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..104 score: 21.053263

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G001110	Lsi01G001110	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G001110.1.exon.1	Lsi01G001110.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G001110.1.CDS.1	Lsi01G001110.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G001110.1	Lsi01G001110.1-protein	polypeptide