Lcy13g001230.1 (mRNA) Sponge gourd (P93075) v1

Overview
NameLcy13g001230.1
TypemRNA
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr13: 1185914 .. 1187137 (+)
Sequence length405
RNA-Seq ExpressionLcy13g001230.1
SyntenyLcy13g001230.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCGTTTTCTCTAGGTCCAGTGTTTGCATTCCGAGTGTCCATAGTTTTAGGTCTGATTGTTGCTTGTGCACAATGCGTATTTCTCAGTCTGGCACAATTGACTTCATTATCTGTTCTTTCCTTCACTCTCTTTTAAAAACAGTTTTAACAAACTTTTATGTTTGTTTTTAAAAAATATTATGAATGTTGTATGGTGGATTACAGTTACTCTAATTTTTTAGAATATGGATGATTTATATAGTTTTCGTTTTGATTGTGTATCTTACAAATCTGATTTTGCAGGGTTAAAGAGATGAACACATTGGATCAAACCAAAAGTTGGAGACGGCAAGGAACTACGGCTGCGCTTCAGCAATTGGCTGTAAGATCTCCGTCCTAGCTAATTTATCATTCAAATATATATGTGTGTGTGTTCGTTCAAAGTGTTCCTGTTAGGCCTTCTGAGTTCTGACATAGTTAGAAAATTTCAATTGTTGATTCTATCAATCCTCTTACTCTGTTCAAAAAAAAAAAAAAAAAAAAAAAAATCCTCTTACTCTGTTACTGTAGGCCAGATCTATACATATGTTCATAAGCGTTCGTTCCTTTTAGGCCTTCTATAATAGTTTGATTCTATGAATCCTCTCACTCAGTTACTGTAGGCCTTCTCTCTCTCACACATATCTTTCTTTTCTGTTTTCTGGATGAAAAGTTCACAAGTCGTGTTACGAAAGGCCACATGAATTTTATGTTCAAAATATGTAGTTCTGTGAAAATGATGATATATTTTATTTGCATTCTACCCTTAACTTTATACATGGTTAGGTACATGTGAAGAAAATCTGCTATTGTTCCGAACCAGAGGACTCTGATGCGCGTTTGCTCTGTTTTCTGTACCAAGGGTTTCTTTCACATTCACAGGTATAACTTTCTCCTTTCCCAATCATTTTTAATGAAGTAAAGACAAAAGCATACTCTGGAAAGTTGGGGGGAAATAACATTAAAATTTAAAGACCTCAAATAGCGAGTTTGTGGAGATTGACAACAGTAAAATGGTAGTATTAGGAGCAAGTTGCAGCCTTCTATGGCGGGACCTTGACGATGGGTTTTGGTTTGTTTCTGTGTTTGGAGATTGGATCAATCCCTCCACTGAAAATTAGAGAAAAAGTTCAAAAGTGGACAGCAAGAACAATGGCTGAGAATGAATTTGGGACCATTTTGAGATCAGGATCAGTTTAA

mRNA sequence

ATGGCCACCGTTTTCTCTAGGTCCAGTGTTTGCATTCCGAGTGTCCATAGTTTTAGGGTTAAAGAGATGAACACATTGGATCAAACCAAAAGTTGGAGACGGCAAGGAACTACGGCTGCGCTTCAGCAATTGGCTGTACATGTGAAGAAAATCTGCTATTGTTCCGAACCAGAGGACTCTGATGCGCGTTTGCTCTGTTTTCTGTACCAAGGGTTTCTTTCACATTCACAGGAGCAAGTTGCAGCCTTCTATGGCGGGACCTTGACGATGGGTTTTGGTTTGTTTCTGTGTTTGGAGATTGGATCAATCCCTCCACTGAAAATTAGAGAAAAAGTTCAAAAGTGGACAGCAAGAACAATGGCTGAGAATGAATTTGGGACCATTTTGAGATCAGGATCAGTTTAA

Coding sequence (CDS)

ATGGCCACCGTTTTCTCTAGGTCCAGTGTTTGCATTCCGAGTGTCCATAGTTTTAGGGTTAAAGAGATGAACACATTGGATCAAACCAAAAGTTGGAGACGGCAAGGAACTACGGCTGCGCTTCAGCAATTGGCTGTACATGTGAAGAAAATCTGCTATTGTTCCGAACCAGAGGACTCTGATGCGCGTTTGCTCTGTTTTCTGTACCAAGGGTTTCTTTCACATTCACAGGAGCAAGTTGCAGCCTTCTATGGCGGGACCTTGACGATGGGTTTTGGTTTGTTTCTGTGTTTGGAGATTGGATCAATCCCTCCACTGAAAATTAGAGAAAAAGTTCAAAAGTGGACAGCAAGAACAATGGCTGAGAATGAATTTGGGACCATTTTGAGATCAGGATCAGTTTAA

Protein sequence

MATVFSRSSVCIPSVHSFRVKEMNTLDQTKSWRRQGTTAALQQLAVHVKKICYCSEPEDSDARLLCFLYQGFLSHSQEQVAAFYGGTLTMGFGLFLCLEIGSIPPLKIREKVQKWTARTMAENEFGTILRSGSV
Homology
The following BLAST results are available for this feature:
BLAST of Lcy13g001230.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy13g001230.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy13g001230.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy13g001230.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lcy13g001230Lcy13g001230gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy13g001230.1.exon1Lcy13g001230.1.exon1exon
Lcy13g001230.1.exon2Lcy13g001230.1.exon2exon
Lcy13g001230.1.exon3Lcy13g001230.1.exon3exon
Lcy13g001230.1.exon4Lcy13g001230.1.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy13g001230.1.cds1Lcy13g001230.1.cds1CDS
Lcy13g001230.1.cds2Lcy13g001230.1.cds2CDS
Lcy13g001230.1.cds3Lcy13g001230.1.cds3CDS
Lcy13g001230.1.cds4Lcy13g001230.1.cds4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lcy13g001230.1Lcy13g001230.1-proteinpolypeptide