Lcy10g006690.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy10g006690.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr10: 27671493 .. 27678523 (-)
Sequence length	732
RNA-Seq Expression	Lcy10g006690.1
Synteny	Lcy10g006690.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTAGCAGCACAAATGTCCCCAACCAAGCTTCTTTTCGGAAGAAAAAGGTCAAAATGGAAGAGTTTTGGACAGAAATGGAAGGTAGTAGAAAGGCTTTCAAAGAAGCGTGGACAGCAACCAACAATATCTCAAACATTAACTTTACTTCAAGAATTCAGGAAGGTCTTGTGGAAATGAGTAGGTGGAACAGAAACCGGCTACAGGGATCCATTATTGGGGCTATTGACAGAAAAGAAAGAGAAATCCAAGCTTTAGAATTATGCCCCAACCAAATGAATGCAGACTCCATCAGCAAGGCCGAAAGGGAGCTAGAAACACTTCTAAGGGAGGAAGAAAGCTACTGGAAAATCCGAACCAGAGAAGATTGGTTGAAAAGTGGAGATAAGAACACAAAGTGGTTCCACCAAAGAGCTTCATTCAGAAAGAAAAAGAATGAAATAAAAGGAATCCTTGACGAAAGGAACAGGTGGACTGAAAATGAAGAAGAGATAGGGCAGATTGCCACCACTTTTTTCAAAAAGCTCCTGACATCAAACTACCCAACAAAAGAAAGCATAAGTGGTGGAGCCTGTAACCACTCGAATCTCGGAAGATAAAAAAAAAATCCTCGACAGGCCTTTTACTAAAGAGGAAATAGAGATAGCCATCAAGGGCATGAACCCAACAAAAGCTCCAGGCCCTGACGGAGCGAATGCTAAGCTTTATCAAAGATGTTGGGAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTTTATACTTGTATTTAATAAAGTGTTATTTAGTTTCTACAATAAAATGTTATTGTTAAATATTGCACTATTTGACCCTAATCCAATAAACTAGACATCCTAGGCTGTAATATGAAGTCTTGAACTATATGTAGCGACATATGGGGATCATTGTTCAAGAAACAGCCTAAAGGGTCTATAGTATAGGGATAAGACTGGGTGCCTTACCCTGGCAACACTATGGATACGACCCACTTTGTATTTGATACAAACGCTATGATCCAACGCGTTCGTGTAGGAGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAATCACTGGTTATAACACCGTTAACTAGTTGGTTTTCTATTTCACTAGGACGACCTAGACAACTTAGTCTTAATCCTGAGTTGATTATGGACTCCTGCTCATGAGAGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAATTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCTCGACTTTAGGGAAGTAGATGAGTGTTCCCTTAAGTGGTTACTCCGAGTCTTGAACAAAGGGCCCTACCCTCTCAATGGCACGAGAGGGTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGGTACTTAAGGAAATAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGACGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAGATCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTGCAACTGTGAGTCTATAGTGGAATGTAAACACAGTTAACGAATATTAATTAATGTGGTTAATGAGTTTGACCAATTAATCTCACATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGATTTTCCAGAAATTGGAACATTGTTCAAATAGTATACCTATTCGTAGGCTACCCCATAAAAACGAGAGATGTGGATCCTTCTTCAATCCCCAAGAGAATAAAGAATTTGTATCGAAAAATGCTACATTCTCAGAAGAAGACCACATAAGAAATAATAAGCCACAAAGTAAGATCGTTTTAAGTAAATTGACTGATGAAGCTACAGAAATATCAACAAGAGTTGTTAATCAACAAGGGTTGTTGATGATGCTGGACCTTAAACAAGAGTTGTTGATAAGGCCAATACAATTGGTTAGTTACATCTATCTCAAAAGTTGAGAGTGCCTCAATACAGTGGGAGGATTGTTCCACAATTTGACCGTTACATGGGCTTAATTGAAGCCCAGATCGTCATAGCTGATGATTTAGAGGATTCATTGTCTTAAAGTAAGATAATGAATGATGTTAACAAGAACCAATTGGATTAAAGTAATGGACCCGGAATTGAAATATGTGATTTCAAATCCATCTAGAATCTTATAGATCTATCTAATGGGTAATACCTAAAGATTACAAATGAATCTACAAGAAGAAACAAGACATAATCTTATGGTTAGACTTATGACAAAAGGGTTAAACCCAGATACATGGGATAGTAATAAATTCTTATCTCATGTCGTCATGTTGAAGTCTGTTAGAACTCTTGTCCATTTAGAATGGATGTCAAGACTACCCTTTTGAATGGTAATCTTGAGAAGAGTATCTACATGTCTCAAGCATAATGGTTCATTTAGCAAGATCAGAAGCAAAAAGGGATTTGCAAGCTTAAGTGATCCATTCATGGATTGACCTAACCAATTCGATCTTGGAATATAAGATTTGATACTGTGATCAAATCTTTTGGCTTTAATCAAGAACATTGATGAATCTTGTCTTTACAAGAAGATCATCAATAGTTAAGTAGCTTTATTAGTGTTGTATGTAATTGATATCCTAGTCATTGGGAATGATGTAGGTTATCTTACTGACTAGTAAAATAAGCTAGCAGCTCAATTCCAAATGAAAATTTGGGAGAAGCTAAGTTCGTTCTTCGGATCCAAATCGTTAGGAACGGTAAGAACAAAAAGCTAGCATTGTCTCAAGTGTCTTATATCTACGAGATGTTAGTTAGATATAAGATGCAGAATTCCAAGAAGGGTTCTCTACCTTTCAGGCGTGGAATTCATTTTGTCTAAGAAACGGTTTCCTGAGACACCTCAAGAAGTTGAGGACATGAGACGAATGGCCTATGCAATAGGGATTGTCAGTAAGTACCAATCTAATCCAAGATTTGATCATTGGAAAACCGTTATGAATACCCTCAAGTATCTGAGGAGAAAGATGAACTATATGCTTGTGTATAGGACTAAGGATTTGATCCTTACAGGATACACTGACATGGATTTTAAGACTGATAAGGATATCTGTCTGACATAAAGGATGGCTAGCGGACCAATTCCAAATGAAAGATTTAGGAGAGGTCGAATATGTTCTTGGAATCCAAATAGTCGGGGATCGGAAGAACAAAACGCTAGTCCTGTCTCAAGCAACGTATATTGACAAAATGTTGTCCCGATATTCGATGCAGAACTCCAAGAAGGGCTTATTGCGTTTCAAGCATGAGGTTCACTTGTCTAAGGAATAGTGTCCTAAGACACCTCAAGAGATTGAGAATATGAGACAGATTCCCTAGGCCTCCGCTGTGGGCAGCATAATGTATGCAATGCTCTGCACAAGGCCTGACATCTGTGATGATGTAGGGAAAGTCAGCACATATCAATAAGTATCCATGGTCAAACTTTACAAAGGAGCTATAATGTGACATAATTACAGTCTTGACCATATACGCCAAAAATATAGTTGCTTGTGAAGCAGCAATAGAGATTGTAAGGCTTAGAAAGTTCTTGACTGATTTGGAATGTGTTCCAAATGTGAACTTGCCCATCAGACTTTATAGTGATACAGTGGTGTTGTGGCAAATTCATAAGAACTTTCCAACCCAAGACAAGCACACACATTGAATTAAATTGAAATATTCACGAAGACTCTCTCGGCTAAATTGAAAGTTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTTTATACTTGTATTTAATAAAGTGTTATTTAGTTTCTACAATAAAATGTTATTGTTAAATATTGCACTATTTGACCCTAATCCAATAAACTAGACATCCTAGGCTGTAATATGAAGTCTTGAACTATATGTAGCGACATATGGGGATCATTGTTCAAGAAACAGCCTAAAGGGTCTATAGTATAGGGATAAGACTGGGTGCCTTATCCTGGCAACACTATGGATACGACCCACTTTGTATTTGATACAAACGCTATGATCCAACGCGTTCGTGTAGGAGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAATCACTGGTTATAACACCGTTAACTAGTTGGTTTTCTATTTCACTAGGACGACCTAGACAACTTAGTCTTAATCCTGAGTTGATTATGGACTCCTGCTCATGAGAGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAATTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCTCGACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTTACTCCGAGTCTTGAACAAAGGGCCCTACCCTCTCAATGGCACGAGAGGGTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGGTACTTAAGGAAATAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGACGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAGATCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTGCAACTGTGAGTCTATAGTGGAATGTACACACAGTTAACGAATATTAATTAATGTGGTTAATGAGTTTGACCAATTAATCTCACATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCATAAAGTAATTTGAGGCAACTAAGTAATAAATGTAAATTGAAAATGTTCAATTTACTAAGGGAAACAAATATAATATATATTGATATATTATTATGAGAGAAATTAATATTTGAAGAAATTCAAATATAAATTTATGGAAGTTTGAAAGAGTTCAAATAATGAATTAATTAATTTAAGGCCTAAAATGTGTTTGGGCAAATTAATTAATTCTAGGCCGGAAATTAAATATGTGATATTTAATTGGTGGGAATTAATCAATTATGTAAATAATTAATCACTTAAGGAAGTGATTAATCATTTATGGAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTGTGGAAAAGATTAATCAATTGTGGAATTGATTGATCATGATTGATTAATTAAGGAATAAGATTGAATCAATTTTGGAAAAGATTGATTTAATTGAATATTTTATTCATGGCCTCTCTTCTATAAATAGAACACTAGACCTAATTGGTCTAGGACACTTGACACTTTGCTCTTGCTCTTAGACTCTCAAGACAAGACCTAGAATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCACACAAGTCTTTTGCCTCCTAGACCTAGAGTCATACCGGTGTAACCTCTGTGGTTATTGTGTCATTCAAGAAGAATTTTCCAGCGATCACAAGACAAAGGAGGCTGCTGCGTTTTGTTCGTTGGAGCATCGTTGGCGACGAACGGTCAAGTCTACAACGGAGGTTTGTAACGGTTCTTCCCCTTTTCTTTAGAAAAGTATGAAAATAAATTTAGATTTATTTTTAAGCATGTTTAAACTGATTTTCCAGCAACTTTAAAGAGTGTTTAAAGTTTGTTTGAGTTTTCGTAACGGTATTTTAATGTTAATTAATATACAGCGTAAGGTCCAATCGATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCAGGGAGTTCATGGGGGAAGACACAATGAGAATTTGTCTTGGCATTCTCAATAGGAAAGACAACATGGAACCCATCAATAACACCCTGATTGCTCTCATCCCAAAAACAAAGAATTCAAAAAGGATGATGGAGTTCAGACCCATTAGTTTGTGCAACGTTATTTATAAGATCATAGCCAAGGCCATGGCGAATAGAATGAAAAGGGTGCTTGACTCCATTATCTCCCTAAACCAATCAGCCTTTGTTCCAGGTAGACAAATTACTGACAATGTGATCGTTGGTTTCGAATACATCCATGCCCTAAACAACAGAAGGAAAGGCAAAACAGGGTATACAACTATTAAGCTCGATATGAGCAAAGCATACGACAGGGTCGAATGGATCTTCATTGAGGAGATAATGAAAGGGATGAATTTCAGTGAAGAATGGACTAATAAAGTGATGCAATGCATCTCTTCGGTTAGCTATTCTATACTTATTAACGGTCAGCCTCAACAGGAATTTAGGCCAAGCAGAGGCCTTAGACAGGGTGACTCTTTATCCCCCTATCTCTTCCTCCTGTGTGCTGAAGGTTTCTCAGCTCTCCTCAAAAGGGAAGAATCCTTATCAAATCTCTGTGGCTTCCAAATTAACAAACATTGCCTTGTTCTAACGCACTTTTTTTTTTTGGCAAATGACAGTTTGGTTTTCTTGAAAGCGGACTCAAAAAGCATCCTTTCCTTAAAAAAGGTGTTGGAGTGGTATGAGAAAGCTTCAGGGCAAACTATCAATCTAGAAAAATCCGCCTTTATGACAAGCAAAAACATGTCCCCCAAAGCGAAAGAAGATTATGAAAGGTGGTTGGGGATAAAAAGATCGAAGTCTCTTGACCAATATCTGGACATGCCTTCCCAAATAGGAAGGAACAAAGGAGCAGCCTTCTCAAAACTCAAAGACAAAGTGGAAAAAGTTCTCCAGGGGTGGAAAGACAAGTTGTTCTCTCTCGGGGGAAAGGAAGTGTTGATCAAATCGGTGGCTCAAGCTATTCCCACCTACACTATGAGCTGTTTTCGTCTCCCTAACTATATTTTCATGACATTGACAGGTTATGCGCTAAATTCTGGTGGGGAGCGACGGGAGAGAAGGACAAGCACCATTGGACCAGCTGGAATAAGATGTGCAAGCATAAAGAAAAGGGAGGGCTGGGGTTCAGATAGCTTTCAGCTTTCAATCAAGCGATGTTAG

mRNA sequence

ATGGAATTTAGCAGCACAAATGTCCCCAACCAAGCTTCTTTTCGGAAGAAAAAGGTCAAAATGGAAGAGTTTTGGACAGAAATGGAAGGTAGTAGAAAGGCTTTCAAAGAAGCGTGGACAGCAACCAACAATATCTCAAACATTAACTTTACTTCAAGAATTCAGGAAGGTCTTGTGGAAATGAGTAGTTTGGTTTTCTTGAAAGCGGACTCAAAAAGCATCCTTTCCTTAAAAAAGGTGTTGGAGTGGTATGAGAAAGCTTCAGGGCAAACTATCAATCTAGAAAAATCCGCCTTTATGACAAGCAAAAACATGTCCCCCAAAGCGAAAGAAGATTATGAAAGGTGGTTGGGGATAAAAAGATCGAAGTCTCTTGACCAATATCTGGACATGCCTTCCCAAATAGGAAGGAACAAAGGAGCAGCCTTCTCAAAACTCAAAGACAAAGTGGAAAAAGTTCTCCAGGGGTGGAAAGACAAGTTGTTCTCTCTCGGGGGAAAGGAAGTGTTGATCAAATCGGTGGCTCAAGCTATTCCCACCTACACTATGAGCTGTTTTCGTCTCCCTAACTATATTTTCATGACATTGACAGGTTATGCGCTAAATTCTGGTGGGGAGCGACGGGAGAGAAGGACAAGCACCATTGGACCAGCTGGAATAAGATGTGCAAGCATAAAGAAAAGGGAGGGCTGGGGTTCAGATAGCTTTCAGCTTTCAATCAAGCGATGTTAG

Coding sequence (CDS)

ATGGAATTTAGCAGCACAAATGTCCCCAACCAAGCTTCTTTTCGGAAGAAAAAGGTCAAAATGGAAGAGTTTTGGACAGAAATGGAAGGTAGTAGAAAGGCTTTCAAAGAAGCGTGGACAGCAACCAACAATATCTCAAACATTAACTTTACTTCAAGAATTCAGGAAGGTCTTGTGGAAATGAGTAGTTTGGTTTTCTTGAAAGCGGACTCAAAAAGCATCCTTTCCTTAAAAAAGGTGTTGGAGTGGTATGAGAAAGCTTCAGGGCAAACTATCAATCTAGAAAAATCCGCCTTTATGACAAGCAAAAACATGTCCCCCAAAGCGAAAGAAGATTATGAAAGGTGGTTGGGGATAAAAAGATCGAAGTCTCTTGACCAATATCTGGACATGCCTTCCCAAATAGGAAGGAACAAAGGAGCAGCCTTCTCAAAACTCAAAGACAAAGTGGAAAAAGTTCTCCAGGGGTGGAAAGACAAGTTGTTCTCTCTCGGGGGAAAGGAAGTGTTGATCAAATCGGTGGCTCAAGCTATTCCCACCTACACTATGAGCTGTTTTCGTCTCCCTAACTATATTTTCATGACATTGACAGGTTATGCGCTAAATTCTGGTGGGGAGCGACGGGAGAGAAGGACAAGCACCATTGGACCAGCTGGAATAAGATGTGCAAGCATAAAGAAAAGGGAGGGCTGGGGTTCAGATAGCTTTCAGCTTTCAATCAAGCGATGTTAG

Protein sequence

MEFSSTNVPNQASFRKKKVKMEEFWTEMEGSRKAFKEAWTATNNISNINFTSRIQEGLVEMSSLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRSKSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYIFMTLTGYALNSGGERRERRTSTIGPAGIRCASIKKREGWGSDSFQLSIKRC

Homology

[Close]

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL
Match: A0A2I4ERH4 (uncharacterized protein LOC108992010 OS=Juglans regia OX=51240 GN=LOC108992010 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.4e-26
Identity = 64/138 (46.38%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 53  RIQEGLVEMSSLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKED 112
           +I   L    SL+F KA+ +    ++ +L +YE +SGQ IN  K+  + S N+    KED
Sbjct: 131 KISHLLFADDSLLFCKANMQENQRIQSLLNFYEASSGQVINRNKTGLVFSSNVQQSTKED 190

Query: 113 YERWLGIKRSKSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIK 172
              + G+++S+  ++YL +PS +GR+K  AFS++K +V + LQGWK+K+ S GGKEVLIK
Sbjct: 191 LLNFWGVEQSQEYEKYLGLPSFVGRSKTRAFSEIKHRVWRKLQGWKEKVLSAGGKEVLIK 250

Query: 173 SVAQAIPTYTMSCFRLPN 191
           +VAQAIPTY+MSCF+LP+
Sbjct: 251 AVAQAIPTYSMSCFKLPS 268

[Close]

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL
Match: A0A2N9GTH0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30581 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 63  SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
           S+VF  AD     +L K+LE YEKASGQ +N EK+A   SKN S + K+   R +G+   
Sbjct: 197 SIVFYHADPTQCQNLLKILEVYEKASGQAMNREKTALFFSKNTSSETKDKIMRIVGVNEI 256

Query: 123 KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
           KS +QYL +PS IGR+K  AF  LKD++ K L GW++   S+ GKE LIK+VAQAIP YT
Sbjct: 257 KSHEQYLGLPSIIGRSKKKAFDGLKDRLWKRLNGWQENYLSIAGKETLIKAVAQAIPIYT 316

Query: 183 MSCFRLP 190
           M CF LP
Sbjct: 317 MQCFLLP 323

[Close]

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL
Match: A0A2N9ITS3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55667 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25
Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 63   SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
            SL+F KA ++    L+ +L+ YE+ASGQ IN +K+    SK      +E  +  LG+   
Sbjct: 978  SLLFTKATTRDCAKLQVILQLYERASGQQINRDKTTIFFSKATPTVTQEAIKNTLGVPII 1037

Query: 123  KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
            K  ++YL +PS +G+N+ A F++LK++V   L GWK+KL S  G+EVLIKSVAQAIPTYT
Sbjct: 1038 KQYEKYLGLPSFVGKNRTACFTQLKERVWSKLMGWKEKLLSQAGREVLIKSVAQAIPTYT 1097

Query: 183  MSCFRLPNYIFMTL 197
            MSCFRLPN +   L
Sbjct: 1098 MSCFRLPNRLCQDL 1111

[Close]

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL
Match: A0A2N9E7R2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2889 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25
Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 63  SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
           SL+F KA ++    L+ +L+ YE+ASGQ IN +K+    SK      +E  +  LG+   
Sbjct: 420 SLLFTKATTRDCAKLQVILQLYERASGQQINRDKTTIFFSKATPSGTQEAIKNTLGVPII 479

Query: 123 KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
           K  ++YL +PS +G+N+ A F++LK++V   L GWK+KL S  G+EVLIKSVAQAIPTYT
Sbjct: 480 KQYEKYLGLPSFVGKNRTACFTQLKERVWSKLMGWKEKLLSQAGREVLIKSVAQAIPTYT 539

Query: 183 MSCFRLPNYIFMTL 197
           MSCFRLPN +   L
Sbjct: 540 MSCFRLPNRLCQDL 553

[Close]

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL
Match: A0A2N9HXE3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 63   SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
            SL+F KA  +  + L+ +L+ YE+ASGQ IN +K+    SK      +E  +  LG+   
Sbjct: 910  SLLFTKATIRDCVKLQVILQLYERASGQQINRDKTTIFFSKATPSGTQEAIKNTLGVPII 969

Query: 123  KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
            K  ++YL +PS +G+N+ A F++LK++V   L GWK+KL S  G+EVLIKSVAQAIPTYT
Sbjct: 970  KQYEKYLGLPSFVGKNRTACFTQLKERVWSKLMGWKEKLLSQAGREVLIKSVAQAIPTYT 1029

Query: 183  MSCFRLPNYIFMTL 197
            MSCFRLPN +   L
Sbjct: 1030 MSCFRLPNRLCQDL 1043

[Close]

BLAST of Lcy10g006690.1 vs. NCBI nr
Match: XP_030942886.1 (uncharacterized protein LOC115967872 [Quercus lobata])

HSP 1 Score: 129.4 bits (324), Expect = 4.2e-26
Identity = 70/147 (47.62%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 43  NNISNINFTSRIQEGLVEMSSLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTS 102
           N IS      ++        SL+F KA+      LK++L+ YE  SGQ IN +KS+   S
Sbjct: 466 NGISICRGAPKVSHLFFADDSLLFCKANGNECNKLKEILDLYESTSGQKINTDKSSIFFS 525

Query: 103 KNMSPKAKEDYERWLGIKRSKSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLF 162
            N S + K++    LG  +  S  +YL +PS IGR+K   F+++KDKV K L GWK KL 
Sbjct: 526 PNTSQELKDEVLSILGPMQDSSHTKYLGLPSIIGRSKKVVFAEIKDKVCKKLAGWKSKLL 585

Query: 163 SLGGKEVLIKSVAQAIPTYTMSCFRLP 190
           SLGGKE+LIK+VAQA+PTYTMSCF+LP
Sbjct: 586 SLGGKEILIKAVAQAVPTYTMSCFQLP 612

[Close]

BLAST of Lcy10g006690.1 vs. NCBI nr
Match: XP_030970164.1 (uncharacterized protein LOC115990474 [Quercus lobata])

HSP 1 Score: 129.4 bits (324), Expect = 4.2e-26
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 63  SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
           SL+F KA  K    L+++L  YEKASGQ +N  K++   S N S   +E+ + W G +  
Sbjct: 22  SLIFCKATLKECDELQRLLAVYEKASGQQLNRTKTSLFFSSNTSRDVQEEIKNWFGAQII 81

Query: 123 KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
           K  ++YL +PS +G+NK   F+ +K+K+ KVL GWK+KL S  GKEVLIK+VAQAI TYT
Sbjct: 82  KQHEKYLGLPSLVGKNKRTTFNAIKEKLGKVLAGWKEKLLSKAGKEVLIKAVAQAILTYT 141

Query: 183 MSCFRLPNYIFMTLTGYALN 203
           MSCF+LP+ +   L G   N
Sbjct: 142 MSCFKLPDLLCDELMGMIQN 161

[Close]

BLAST of Lcy10g006690.1 vs. NCBI nr
Match: XP_018821989.1 (uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical protein F2P56_024162 [Juglans regia])

HSP 1 Score: 128.6 bits (322), Expect = 7.1e-26
Identity = 64/138 (46.38%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 53  RIQEGLVEMSSLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKED 112
           +I   L    SL+F KA+ +    ++ +L +YE +SGQ IN  K+  + S N+    KED
Sbjct: 131 KISHLLFADDSLLFCKANMQENQRIQSLLNFYEASSGQVINRNKTGLVFSSNVQQSTKED 190

Query: 113 YERWLGIKRSKSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIK 172
              + G+++S+  ++YL +PS +GR+K  AFS++K +V + LQGWK+K+ S GGKEVLIK
Sbjct: 191 LLNFWGVEQSQEYEKYLGLPSFVGRSKTRAFSEIKHRVWRKLQGWKEKVLSAGGKEVLIK 250

Query: 173 SVAQAIPTYTMSCFRLPN 191
           +VAQAIPTY+MSCF+LP+
Sbjct: 251 AVAQAIPTYSMSCFKLPS 268

[Close]

BLAST of Lcy10g006690.1 vs. NCBI nr
Match: XP_023880426.1 (uncharacterized protein LOC111992797 [Quercus suber])

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-26
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 43  NNISNINFTSRIQEGLVEMSSLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTS 102
           N IS      ++        S++F KA+      LK++L  YE ASGQ IN  KS+   S
Sbjct: 95  NGISICRGAPKVSHLFFADDSIIFCKANGNECNKLKEILGLYESASGQKINTNKSSIYFS 154

Query: 103 KNMSPKAKEDYERWLGIKRSKSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLF 162
            N S + K++  R LG  +  S  +YL +PS IGR+K   F+++KDKV + L GWK KL 
Sbjct: 155 PNTSQELKDEILRILGPMQDSSHTKYLGLPSIIGRSKKVVFAEIKDKVCRKLAGWKGKLL 214

Query: 163 SLGGKEVLIKSVAQAIPTYTMSCFRLPNYIF 194
           SLGGKE+LIK+VAQA+PTY MSCF+LP  ++
Sbjct: 215 SLGGKEILIKAVAQAVPTYMMSCFQLPKSLY 245

[Close]

BLAST of Lcy10g006690.1 vs. NCBI nr
Match: KAF5481481.1 (hypothetical protein F2P56_002126 [Juglans regia])

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-26
Identity = 64/127 (50.39%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 63  SLVFLKADSKSILSLKKVLEWYEKASGQTINLEKSAFMTSKNMSPKAKEDYERWLGIKRS 122
           S++F +A  ++  ++  +LE YEKASGQ +N EK++ + SKN+S + +E+  R+ G+++ 
Sbjct: 290 SVLFCRATLQTNRNMLHLLEVYEKASGQMVNREKTSMLFSKNVSSRQQEEIMRFWGVQQH 349

Query: 123 KSLDQYLDMPSQIGRNKGAAFSKLKDKVEKVLQGWKDKLFSLGGKEVLIKSVAQAIPTYT 182
           +S D+YL +P  +GR K  AFS LK KV + LQGWK+KL S GG+EVLIK+VA +IPTY 
Sbjct: 350 QSYDKYLGLPPMVGRGKYQAFSVLKSKVWQKLQGWKEKLLSQGGREVLIKAVALSIPTYI 409

Query: 183 MSCFRLP 190
           MSCF+LP
Sbjct: 410 MSCFKLP 416

The following BLAST results are available for this feature:

BLAST of Lcy10g006690.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g006690.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I4ERH4	3.4e-26	46.38	uncharacterized protein LOC108992010 OS=Juglans regia OX=51240 GN=LOC108992010 P...	[more]
A0A2N9GTH0	1.3e-25	52.76	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30581 PE=4 SV=1	[more]
A0A2N9ITS3	1.7e-25	48.51	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9E7R2	1.7e-25	48.51	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9HXE3	2.2e-25	48.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1	[more]

BLAST of Lcy10g006690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030942886.1	4.2e-26	47.62	uncharacterized protein LOC115967872 [Quercus lobata]	[more]
XP_030970164.1	4.2e-26	47.86	uncharacterized protein LOC115990474 [Quercus lobata]	[more]
XP_018821989.1	7.1e-26	46.38	uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical ...	[more]
XP_023880426.1	9.3e-26	45.70	uncharacterized protein LOC111992797 [Quercus suber]	[more]
KAF5481481.1	9.3e-26	50.39	hypothetical protein F2P56_002126 [Juglans regia]	[more]

BLAST of Lcy10g006690.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 43..196
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 43..196

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy10g006690	Lcy10g006690	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g006690.1.exon2	Lcy10g006690.1.exon2	exon
Lcy10g006690.1.exon1	Lcy10g006690.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g006690.1.cds2	Lcy10g006690.1.cds2	CDS
Lcy10g006690.1.cds1	Lcy10g006690.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy10g006690.1	Lcy10g006690.1-protein	polypeptide