Lcy09g009070.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy09g009070.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr09: 8897797 .. 8898225 (-)
Sequence length	429
RNA-Seq Expression	Lcy09g009070.1
Synteny	Lcy09g009070.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAATATCAGCGTGCTCCCCAAAAGGGCCAGAACTATCGACAAAACAGAGAGATGGAAGTCAACAGGAAAGTGCAGTGCTCAGTGCATGTAACGGCTGAGTTCGAAAGCGAGAGAGAGAAAGAGACAGAAAAAAATGTGGAGATCAGACATCAGAGAGAGAGAGAAGAAGAAGATGAAGAAGAAATGGAAGACTCGGAGGGCAGACCCAGTGGGGGCACCCTCCCCCTCCCCTGCCTCTGTCCTCTTACAGTTATGGCGATCATCAAAAAAAGTCGGAGCATGTTCAACTTTATCCATCCAAAATTTGGCATAATCTCTAGTGCCTCACTGTCATTTTTACTCAGATTCGTGTACCCACAAAGCATCCGCCATCCAAACCCAACCCCACAACCTCCATTTTGTCATTGCCCTCTACGTGTTTGA

mRNA sequence

ATGGGAAAATATCAGCGTGCTCCCCAAAAGGGCCAGAACTATCGACAAAACAGAGAGATGGAAGTCAACAGGAAAGTGCAGTGCTCAGTGCATGTAACGGCTGAGTTCGAAAGCGAGAGAGAGAAAGAGACAGAAAAAAATGTGGAGATCAGACATCAGAGAGAGAGAGAAGAAGAAGATGAAGAAGAAATGGAAGACTCGGAGGGCAGACCCAGTGGGGGCACCCTCCCCCTCCCCTGCCTCTGTCCTCTTACAGTTATGGCGATCATCAAAAAAAGTCGGAGCATGTTCAACTTTATCCATCCAAAATTTGGCATAATCTCTAGTGCCTCACTGTCATTTTTACTCAGATTCGTGTACCCACAAAGCATCCGCCATCCAAACCCAACCCCACAACCTCCATTTTGTCATTGCCCTCTACGTGTTTGA

Coding sequence (CDS)

ATGGGAAAATATCAGCGTGCTCCCCAAAAGGGCCAGAACTATCGACAAAACAGAGAGATGGAAGTCAACAGGAAAGTGCAGTGCTCAGTGCATGTAACGGCTGAGTTCGAAAGCGAGAGAGAGAAAGAGACAGAAAAAAATGTGGAGATCAGACATCAGAGAGAGAGAGAAGAAGAAGATGAAGAAGAAATGGAAGACTCGGAGGGCAGACCCAGTGGGGGCACCCTCCCCCTCCCCTGCCTCTGTCCTCTTACAGTTATGGCGATCATCAAAAAAAGTCGGAGCATGTTCAACTTTATCCATCCAAAATTTGGCATAATCTCTAGTGCCTCACTGTCATTTTTACTCAGATTCGTGTACCCACAAAGCATCCGCCATCCAAACCCAACCCCACAACCTCCATTTTGTCATTGCCCTCTACGTGTTTGA

Protein sequence

MGKYQRAPQKGQNYRQNREMEVNRKVQCSVHVTAEFESEREKETEKNVEIRHQREREEEDEEEMEDSEGRPSGGTLPLPCLCPLTVMAIIKKSRSMFNFIHPKFGIISSASLSFLLRFVYPQSIRHPNPTPQPPFCHCPLRV

Homology

The following BLAST results are available for this feature:

BLAST of Lcy09g009070.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g009070.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g009070.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g009070.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy09g009070	Lcy09g009070	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g009070.1.exon1	Lcy09g009070.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g009070.1.cds1	Lcy09g009070.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy09g009070.1	Lcy09g009070.1-protein	polypeptide