Lcy09g005850.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGAAATCGAGAGACTTACGGAGGGTTTCAATGGCGCCGGTGGCAGATCTCGGCGGTGTTCAGGTCGAGAACGTGAAATTCCCGGTGGAGTTCAAGCCTCCGTCCTCCGCTAAGACTCTATTTCTCGGCGGCGCAGGTCAGATTCCTCCGCCGTGCGCCGATAACTGTGCTTGTTTTTACCGCTTCTTGTTTCCTTTTCCTTTGCTTTTTCCTTACTGGAATGTGCTTGTGGAAAATCTGTACAGGAGTTAGGGCGTTGGAGATCGGAGGAAACCTCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGGACGCTGTGCCGTCGCTCGCCGGTAAGTGGAGCGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTCGAGTTCTTCAGGGACGTCGTTACTGGTGAGTAACTAGTTTTCTTTTTTAGTTTGTTATATTCTGTACCTGAGAAGTAAAAGATGACTGCTAGATTTCCGCCGTGCTGGCCGCCGTACGTTACCGTATTCCGGTGGCTTGACCTTTTGAATTGCCACACTGTTGATTTTATCGAAGTAAATTTGTTAATTGGACGAATGGAATAAAATATGTTTACGTGAATTTCCGATTTGTAAGATCAGACATTCAGTACGACAATTGATCGGCCAAATTTGATTGCAATTGGTTCCAGAAGAGTACAAATGTACAATTAGTTTGGTTCTTTTCTAATATAAATTTAGAATAATTCGAGACTTTAATACATCATCAGAGATTCAGAGAATTAACTAACTGATGCAAACATGAGCCTCAACCGAGATAGAACTTCGGGAGGCTCCCACATGTTTAAAAAAAAAATAACGAAATGATAATTTGATTATAGAATTTTAAAATTTAAGTAGTTTTGATTTGAAAATAATATACAATTATTTTAATCTGATCTGTAAAACATTTTTCAACAATTTTTTTTCTTTTTGAAACGAATATTGTAGGCCTTTTAACTTGAATATATTAGAACTGGCACATGGATTTTTCAGGTCCTTTCGAGAAGTTCACAAATATAACTTTAATATTGCCACTTACGGGTCAGCAATACGCTGAGAAAGTTGCAGAGAACTGTGCAGCAGCTTGGAAATCCATGGGAATCTATACTGATGAAGGAGCCGAAGCCATTCAAAAGTTTATTGATGCCTTCAAGGATGAAACTTTCCCTCCTGGCTCTTCCATTCTTTTCACCCATTTGCCCAATGCTTTATCGGTTAGTACGATCTTTTACTCTCAATTTAATGTTGAAAAAAGAAATTAATTATAGGGATGGCTATTTATAAAACTATGGTATTTTTGACAACATGGGATTTGAAAATTTTATGAGCTATGTCCTTGTTGGTAAAAGTGTTTTCTTAAAAACTATGATGGTAGATATAATAATTAGATAAAATGTATATCTAGATCATACTAATCAGCATTATCAAATTAGCTAGATGATGGATTGCATTTTCAAATAATGATATATTTGTGTATATTTTTAAAATTTGTATATTTTCGGTTACGTTTATAGAAATGCAGAATACTGAAAAGAATAGACTGCCTACCCAAATTTCTCTCATATATAATGAGAATTTTTCGTGGATAGTAGTGCAAACAAGTGTGCACTTGATTGTTTTTTTTTTTTTTTTTTTGACGAGCAAAACGAAAATTCATTAATGAGAAATAAATCCCTCAAGGGGTACAAACATTTGCTTTTCAAGCAAAGCCATATTAGTGATCCATGGCGGAAAATTCATTGATTGTGTTTTTAAAAAGTGTTTATTGATGTTAAAATCATTAATAGTGATTGGTTGACATTTTTAACATGGTAAAGACTTAAAAGTAGGTTTGTTTAAAAAACAAAGAAAAGACTTAAAAGTACGTTTTTACTAATTAAACTTTTTTTTAATGTTTGAAAATCATTGCCTAAAACAATTGTGATAATCATTAATTTGAAAAATTCTAAAAATATATAAAAGTTTTACAGGAAACATTTTACTAATTTTCTTCCAGAAATGCAAATATAACAAGAGTTTCACTTTGAAACATATTTTTCCACAAAAAAATGAAAATGAGTTAATAGTGATTTTTGTTGGGGTGATGCAGATTAACTTCTCAAAGGATGGGTGCATTCCTGAACAAGCGAGGGCGATAATAGAGAACAAGCTACTTTCTGAATCTGTATTGGAATCCATTGTTGGTAAGCATGGAGTTTCGCCAGCTGCAAGGCTTAGTTTGGCTACCAGATTCTCCCAATTGTTCAATCAGCCAAAGCCCAAAGACATCTCTGAAGGAGTGGAGCAGTTCAAAGAAGCAAATCATTCAGATATTACCAAGAACCCATAATTTAAATTATATCGTTTTCCCACTCCACTTGCCTTTTATTTTTAATAATTTGTAAGACTAGTGTGTATTTGCTTTCTTGATTGGCGATTAGATTTGAATGCAAATGATACTAAAAGTGATAGTCACATTAGTGGAGATCTTGTCCTGTAGGTGATATCTTGATGGGTTTTTAGTTTTTTAAGTCTCGTTT GTGAAATCGAGAGACTTACGGAGGGTTTCAATGGCGCCGGTGGCAGATCTCGGCGGTGTTCAGGTCGAGAACGTGAAATTCCCGGTGGAGTTCAAGCCTCCGTCCTCCGCTAAGACTCTATTTCTCGGCGGCGCAGGAGTTAGGGCGTTGGAGATCGGAGGAAACCTCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGGACGCTGTGCCGTCGCTCGCCGGTAAGTGGAGCGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTCGAGTTCTTCAGGGACGTCGTTACTGGTCCTTTCGAGAAGTTCACAAATATAACTTTAATATTGCCACTTACGGGTCAGCAATACGCTGAGAAAGTTGCAGAGAACTGTGCAGCAGCTTGGAAATCCATGGGAATCTATACTGATGAAGGAGCCGAAGCCATTCAAAAGTTTATTGATGCCTTCAAGGATGAAACTTTCCCTCCTGGCTCTTCCATTCTTTTCACCCATTTGCCCAATGCTTTATCGATTAACTTCTCAAAGGATGGGTGCATTCCTGAACAAGCGAGGGCGATAATAGAGAACAAGCTACTTTCTGAATCTGTATTGGAATCCATTGTTGGTAAGCATGGAGTTTCGCCAGCTGCAAGGCTTAGTTTGGCTACCAGATTCTCCCAATTGTTCAATCAGCCAAAGCCCAAAGACATCTCTGAAGGAGTGGAGCAGTTCAAAGAAGCAAATCATTCAGATATTACCAAGAACCCATAATTTAAATTATATCGTTTTCCCACTCCACTTGCCTTTTATTTTTAATAATTTGTAAGACTAGTGTGTATTTGCTTTCTTGATTGGCGATTAGATTTGAATGCAAATGATACTAAAAGTGATAGTCACATTAGTGGAGATCTTGTCCTGTAGGTGATATCTTGATGGGTTTTTAGTTTTTTAAGTCTCGTTT ATGGCGCCGGTGGCAGATCTCGGCGGTGTTCAGGTCGAGAACGTGAAATTCCCGGTGGAGTTCAAGCCTCCGTCCTCCGCTAAGACTCTATTTCTCGGCGGCGCAGGAGTTAGGGCGTTGGAGATCGGAGGAAACCTCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGGACGCTGTGCCGTCGCTCGCCGGTAAGTGGAGCGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTCGAGTTCTTCAGGGACGTCGTTACTGGTCCTTTCGAGAAGTTCACAAATATAACTTTAATATTGCCACTTACGGGTCAGCAATACGCTGAGAAAGTTGCAGAGAACTGTGCAGCAGCTTGGAAATCCATGGGAATCTATACTGATGAAGGAGCCGAAGCCATTCAAAAGTTTATTGATGCCTTCAAGGATGAAACTTTCCCTCCTGGCTCTTCCATTCTTTTCACCCATTTGCCCAATGCTTTATCGATTAACTTCTCAAAGGATGGGTGCATTCCTGAACAAGCGAGGGCGATAATAGAGAACAAGCTACTTTCTGAATCTGTATTGGAATCCATTGTTGGTAAGCATGGAGTTTCGCCAGCTGCAAGGCTTAGTTTGGCTACCAGATTCTCCCAATTGTTCAATCAGCCAAAGCCCAAAGACATCTCTGAAGGAGTGGAGCAGTTCAAAGAAGCAAATCATTCAGATATTACCAAGAACCCATAA MAPVADLGGVQVENVKFPVEFKPPSSAKTLFLGGAGVRALEIGGNLVKFTAIGVYLEEDAVPSLAGKWSGKSAAELMDSVEFFRDVVTGPFEKFTNITLILPLTGQQYAEKVAENCAAAWKSMGIYTDEGAEAIQKFIDAFKDETFPPGSSILFTHLPNALSINFSKDGCIPEQARAIIENKLLSESVLESIVGKHGVSPAARLSLATRFSQLFNQPKPKDISEGVEQFKEANHSDITKNP Homology
BLAST of Lcy09g005850.1 vs. ExPASy Swiss-Prot
Match: O65333 (Chalcone--flavanone isomerase OS=Elaeagnus umbellata OX=43233 GN=CHI PE=2 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.7e-81 Identity = 149/231 (64.50%), Postives = 187/231 (80.95%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy Swiss-Prot
Match: A5HBK6 (Chalcone--flavanone isomerase OS=Pyrus communis OX=23211 GN=CHI PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 4.7e-81 Identity = 149/216 (68.98%), Postives = 173/216 (80.09%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy Swiss-Prot
Match: A5ANT9 (Chalcone--flavanone isomerase 2 OS=Vitis vinifera OX=29760 GN=CHI2 PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.8e-80 Identity = 147/215 (68.37%), Postives = 172/215 (80.00%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy Swiss-Prot
Match: Q4AE11 (Chalcone--flavanone isomerase 1 OS=Fragaria ananassa OX=3747 GN=CHI1 PE=2 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 5.2e-80 Identity = 143/209 (68.42%), Postives = 170/209 (81.34%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy Swiss-Prot
Match: P51117 (Chalcone--flavanone isomerase 1 OS=Vitis vinifera OX=29760 GN=CHI1 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.5e-79 Identity = 146/215 (67.91%), Postives = 171/215 (79.53%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy TrEMBL
Match: A0A6J1BX19 (Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LOC111006117 PE=3 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 7.7e-103 Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy TrEMBL
Match: A0A5D3C1D7 (Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002420 PE=3 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93 Identity = 180/223 (80.72%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy TrEMBL
Match: A0A1S3CJH4 (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103501663 PE=3 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93 Identity = 180/223 (80.72%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy TrEMBL
Match: A0A0A0KU44 (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G505170 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 6.1e-92 Identity = 178/220 (80.91%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. ExPASy TrEMBL
Match: A0A6J1FEB6 (Chalcone-flavonone isomerase family protein OS=Cucurbita moschata OX=3662 GN=LOC111444733 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 5.2e-91 Identity = 175/218 (80.28%), Postives = 191/218 (87.61%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. NCBI nr
Match: XP_022133567.1 (chalcone--flavonone isomerase [Momordica charantia]) HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102 Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. NCBI nr
Match: XP_038890831.1 (chalcone--flavonone isomerase [Benincasa hispida]) HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97 Identity = 187/223 (83.86%), Postives = 200/223 (89.69%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. NCBI nr
Match: XP_008463530.1 (PREDICTED: chalcone--flavonone isomerase [Cucumis melo] >TYK05753.1 chalcone--flavonone isomerase [Cucumis melo var. makuwa]) HSP 1 Score: 351.3 bits (900), Expect = 6.7e-93 Identity = 180/223 (80.72%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. NCBI nr
Match: XP_004149817.1 (chalcone--flavonone isomerase [Cucumis sativus] >KGN51256.1 hypothetical protein Csa_007806 [Cucumis sativus]) HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91 Identity = 178/220 (80.91%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. NCBI nr
Match: XP_023549701.1 (chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo] >XP_023549702.1 chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 346.3 bits (887), Expect = 2.2e-91 Identity = 176/218 (80.73%), Postives = 193/218 (88.53%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. TAIR 10
Match: AT3G55120.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 255.8 bits (652), Expect = 3.6e-68 Identity = 128/225 (56.89%), Postives = 167/225 (74.22%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. TAIR 10
Match: AT5G66230.2 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 202.6 bits (514), Expect = 3.6e-52 Identity = 107/218 (49.08%), Postives = 143/218 (65.60%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. TAIR 10
Match: AT5G66220.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-43 Identity = 91/182 (50.00%), Postives = 123/182 (67.58%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. TAIR 10
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.6e-15 Identity = 58/205 (28.29%), Postives = 91/205 (44.39%), Query Frame = 0
BLAST of Lcy09g005850.1 vs. TAIR 10
Match: AT5G05270.2 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.6e-15 Identity = 58/205 (28.29%), Postives = 91/205 (44.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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