Lcy09g003130.1 (mRNA) Sponge gourd (P93075) v1

Overview
NameLcy09g003130.1
TypemRNA
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr09: 2686484 .. 2690138 (-)
Sequence length285
RNA-Seq ExpressionLcy09g003130.1
SyntenyLcy09g003130.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGAAGTTTGCAGAAAAGGAAATAAATCCTTGCAAGAAAACGATCGCCGTTTTCTGTTGCTCCGCGAAACTTGGAGATGGGCCGAGCTGCCCGGATAAGGCTGATGTTGGGCCGGGCTCAAATGGGCCTCTTGTTGCATTTTCAGTAATATTTACAAAAATTGTTAAGGGGCAACGAGAAAAATAGCTAGATTTAATAGGTGGGTTTTGAAAAATGGCTAAAAAAGTTTAGAAATTAAATAACTGGCTAACGTGATTTTAATTAATAACTTCCTAATTAAACTAGACCAAATTGCCCCTGACAACCCGTCTAAAAAGTCTCTAACGTTTATATTAGAGTTTAGCAGAGAGAAATACAAACTAAAAAGCTGGAGATTTATTAGGAAGGGAGAGAAATATATTTTTGCAACAACCTAACAACCTAACAACCTAATTTGAATCCTAACAACCTAATTTGAACCCTACAGGAAACTCTAGCATAAAAAAAAATCGATTAGGCATTCGGCGTATCGGGAGCTAAGAAAACTCCCTTCCACCTGGAGCTCTTCGCAGTCTCCCTGTAGGATAAGGCTTCTTTGTTTGGTGCTGATGGTAACAACCCGAGCCCGAGTAAGAACTCTAGACTATGACCATTTTCAGCCGAATGCAAAGAGTGGGCCTCTCGATACATTCTGCCTTTGTTTTGTTATTTTGATTTTCCTAGGGGGGTGTTCCCTTTCTCAATTATGACGTACTAGGTTAGGTTGCCATCTAGGTCTCGGTCGGGGGTGACTTCAAAATTCTGGTAACATTCTTCCCTTCCCTTAATTCACGATCCTTGCTGCTGAATTAATCCCTACACTCAACTACATGGCCACAAATGACAAATAGAATAATCATAATACATCACTCAGTAGCGTAATTACAAAGAATTACACCCATGGTTGTGTAAACATTGTATAACCTTTGAACTTCCAAATTAAAACCATGACTATGGAAAAGTCCCCCCACCAAAACGTTAATGTTCAAACTGGGTATAAAAAAAATGAATTTAAAAACTTACCCTACGCATTGATGGCATGTCAAATCGAGTAAAACCCCGGGATGAGCTTGCGATTGCCTCCGGTTGTGTATACCAGTATCTACATCCTGCACTTCGACAACTACACAATAATCCCTGTACATACCATTCTGAGTTAACAAACTAAAAATTTGTCCCCCCCCCCCCCGAGATGAGCTTGCGACTGCCCCAGTTGTGTATACCAGTATCTACATCCTGCACGTCGACAACTACACAACAATCCCTGTACGTACCATTCTGAAACCCGCTGACCATCCAAAAAACATCCTTATCTTCTGAAAGGACTATATTGACCGGGTTGCTTGATCAGTTTCTGAAGAGTGTTAACCGGCAGATACTATTACTGTCAGACAGATCTAGGTAGTTCGCAACACATACCTTGAGTTGAGAGAGGTTAGAATCACAAGGAACCGTCACAGTTCCAGACTTGAAATCACTATAGAGTCTCACGACATTCCAAACACCATCGAGCATAATCATAATCTGTTGTACCGTCATTTTGTGTTATTGGGGAAGTTTTCAATCAAAGTATGACAGAGACACTATTTCCAACGTGTTATGAAAAGACCTAGATTAAGCTATATATCTGAACAAGGTTTAAACACTAATTGAGAGAGAGAAAACCCTTTTGACGGTTTGAGAAGGAGAAGAAAATGGGAATATAAAGAAAATCTTTTTTGATTGTTAGAATGGAGAAGAAAACGAAATCTATGGAATTCAGTTGGAGACCAAAACGGCAAGGATCCCATGAAATTTGGAAAAAAGGATCGGGCATGTAACGACGTTGTAAACGGCGTCTGTATATACACGTATATACCAGGGGTAAAATGGGAAGAAAAAAACTGGCTGGTCGTTCCTTGATTTGCGACAGCCACAACCGAGAATACGAAAGTTTTTTAGCCAAAAAACTGAATGACTTATTTTTTTCTAGCCATCTAGCACAATTTCCCAATTGTTAAATTACGAATTTAATCCACGTAGTTGGGATAAAGTTATAATTTAATCCCTATAGTTTTAAAATTAAAATTTTTTTCCTATATTTTGATAAAATCTCATTAAATAGACCAATACGAGCATAACTGAATTGACATCATTTATATTAATGACTTAGAGGTCTGTGGTTCGGATCCTCCATCTCCCATATGTTGTCAAAAAAAAAAAAAACTCATTAAAAAATCTATATCGTGTGCTTAATCGGTTAGAATTTTATTCTCATCTTGCCACGTATTCAATCCACTAGTAGCTTTTATCATTTACATACTCAATCTGTCAGTGGCTTCTAACGATTAGACTATTTAGTAAAGTTTCGTCAACCGTGGAATGAAATTCTAACTTTATAAGCATTAAATTATAATTTCTTTAAATCATATGACCAATTTTATAATTTAACCTACAAAAATTTATCAAATTTTGAGACCGTTTATAAATATAATATTGTATAATACGTCAATATGTATGCATATATGCCAATAAGGCATAGCTCAACCGGCATAAACTTGTACTAGTGACAACAAGATCTGTGATTCAATTCCCCTACCTGTCCAAAAAAAGGTATGCATATATAAAAACTAGGGAGGATGGTTTTGTAATTTTATGGAAAAAGCAGGGTAATAATAAAGGCAGAGGCGATAATCCGCCAGACTAATTTTTAATTTCTCCATTCTCTGAGAAAAAGAGAAACTTTTGCACCTCTGAAGCTTCAACGCAGGGCAGTCGAATCAAGTCTTCCTCAATTTCATCTCTCTCCGTTGCATGAAAGGTAATACGAATTAGGTCACAGAAACAGCTTCAATTTGATAATTTCTTGTTAAAGTTCATTTCTGGTCTTTCTGATCTGTCTGAAACTAATCATTTCCTGCTTGATTCGGCCCCCCTTTCAAGCAAAAGCGAGTATTTGTCCTTCCCATAATCACTACTGTAGCGAACGTTGGAATTACTGCATGAAATCTCCTTTTTTTCGATCCCCTTTCCTTCAAGAGCAAATGGGGATTATTTCTTATGAACATTTATGGAACCGCCTCTGTTTGAGCAGTTCTTTTTCGTGTTTATGGGTTTTAGATCTGTGTTTGCTTTTAGCATTTAACTATGAAGGAATCCGAAAATCGAAATCCGTGATCCCACTTGTGAAATATTGCGTTCCTTACTATTTGATCAAGTTTGGTCGAGAAGTTTGGCAGTAAAATATGGTCTCCGTGCGATCTAGTACTTAAATTTTTTTATGATGAGATTTTGACGTTGAGGAGCAAAAGAAATGAAAATTACTTTTACTATACGCCTCTTCCTACCGATTTGTGCTTACTTAAGTTTACCCGCCAAATATATGGCCCTTCAGGATCAATAAACCCAGTACTTTTTGAAGTTTGATTGTCAAACTGCCATTCCCCATACTTCCATGGCTTGCATGAGCCTGAAATTTTAGATTGATTTTGACTTGGTGGTTGCTTCTTGCTTGTAGGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTACAATGTCACGTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTATCCTATCCCACCATTCCCTCACTGA

mRNA sequence

ATGGAAAGGAAGTTTGCAGAAAAGGAAATAAATCCTTGCAAGAAAACGATCGCCGTTTTCTGTTGCTCCGCGAAACTTGGAGATGGGCCGAGCTGCCCGGATAAGGCTGATGTTGGGCCGGGCTCAAATGGGCCTCTTGTTGCATTTTCAGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTACAATGTCACGTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTATCCTATCCCACCATTCCCTCACTGA

Coding sequence (CDS)

ATGGAAAGGAAGTTTGCAGAAAAGGAAATAAATCCTTGCAAGAAAACGATCGCCGTTTTCTGTTGCTCCGCGAAACTTGGAGATGGGCCGAGCTGCCCGGATAAGGCTGATGTTGGGCCGGGCTCAAATGGGCCTCTTGTTGCATTTTCAGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTACAATGTCACGTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTATCCTATCCCACCATTCCCTCACTGA

Protein sequence

MERKFAEKEINPCKKTIAVFCCSAKLGDGPSCPDKADVGPGSNGPLVAFSVFYSHELDTKEDLPLQCHVWAVHVGLVGAYPLQYALYPIPPFPH
Homology
The following BLAST results are available for this feature:
BLAST of Lcy09g003130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g003130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g003130.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g003130.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lcy09g003130Lcy09g003130gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy09g003130.1.exon2Lcy09g003130.1.exon2exon
Lcy09g003130.1.exon1Lcy09g003130.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy09g003130.1.cds2Lcy09g003130.1.cds2CDS
Lcy09g003130.1.cds1Lcy09g003130.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lcy09g003130.1Lcy09g003130.1-proteinpolypeptide