Lcy06g001600.1 (mRNA) Sponge gourd (P93075) v1

Overview
NameLcy06g001600.1
TypemRNA
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr06: 1530620 .. 1533273 (+)
Sequence length351
RNA-Seq ExpressionLcy06g001600.1
SyntenyLcy06g001600.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCGTGGAGATGATGGACATTGAACACCGAAGGAAAGTTCAGAGAGAATGGTCAAAGGTATAGTATGCACTCTACGGCGTATAATGCTGATTGTTTTTAGGCTTTCCTTTTTGGAGTTTGTAATTCGTCTACATAGTTTTGGTTTTTGAATTGTAGTCGACAATATGAAGGATATCTGTCGCTTTACGTCTGTAGGTTGTTGAGAACTGGGCATTGGAGCTATTAATGCATTGTCGATAGATCAGTGAATTAACACTTGTGTGGTTACAGTAGATGCTTTCTCTTTCTTGGATTGTAGCTTGATTAATATTTCTTGAAAATATTATGTTCTCAAATCTCATATTCTAAAACTGTGAGAAAAAGTGCTTGGAGCTGAACTAGTTCTATCGAGATGTGTTTGTTTGAGAAAGTATATACTTAGGGAAAAAAAAGTAATAATAAAAATAACCTTTCAGTTGAATTGGTTCTATCATCTATGCAACAAGATTGGTTGATTATTGGATGTACAACAATTCTTCTGTTGTTGATTACCTTTTCTGTTACTAACGTTGTAGTTGTGATGATTTGCTCTTTGGTATGATGAGTTTCTCTTTTTTTTGCCAATTCGCGTTGATAATCTCAGTTTGAGATTAATGGTTTTGAGTGATGCAATATGCTCTTCTTCTTCTTTATCAGCTAACATGACCAAAATCATTTAGGAGTTGCTACTCTGAGATGTTAATGTTGCAAGAGGTGCTCAACATCTTTTGCTTTGGTCCCATTATTGTCCTGAATTAAAAAGGAAAAGCTAAAAAGGAATAGGTGGAGAGAAAACTGCTTGAATTCATTTTCTTTTCTTTTCTTTCTTCTTTTGTTTTTGTGTGCAGGGGCTGGGGGTGCAATTTGCTAAATTATCGCACTGCTAAAAATTTTCTCCCTCTTTACTGTCAGTTTTTCGTTCCTTTTTCTTCCTTTTTGGGTTTACTAGTTTACACATTTGGACTTGTTTCCTTCCCTTCCCTTTGAACTTTAAGTTCCATTCTCATGGATTGCTTTTACTCTGGTTCAAAAGCTAGCAGCTATTTTCAATCATCCACAAACTCCACATTTTTCCATTGATGAGCATCTGCTTCCACGAAAAAAACTATCTAAACTGACTAAAGTGGCTTGCGAATCTCTTTGGTGTTAATCTTTAACTTCACAAGATAGTTTCTATGGCAAGGAGGTTTGGGATGAGACTGGGCTTTTGAGAAACTGGCTCGTTTTATGATAAGTCTAGAAACTGGAAACTAAGATTTTTAAGGAAATGTAGTTAACTATGTATTTATGACAAGCTGAAAGTAGATAATAAAGAAGTTTGTGGCTTCATCATGAATTTTACTTGGGGACAGAAGATGTTGGTTCCATCATGAATTTTATATACTGATGTTGGCTCCTTGAGTTCCTTAATTGCTTCTATTCAAATTATTATTATTGTCTAATTCATTTTTTTTTTTAATTTCTACCTCCAACTCTATATTCTAACTGCCCTCCCCCACCACAAGAATAAGCTCATTTTCTCTGTACATTGTTGCACATTTTATCTCTTCAGAATCCAATGAAGTTTGCAGAGAAGATAGGAGAACGATTGCACCAATCAAGGTCTGAAGGCCTAAAAGTTATCTTCTTCCCTCTCTCTTGTTTGTCTCTGAATGCCCTTCGTCTCTTTATGCCATACCATCCATCTATTCTGATAACATGTATGCCTTTAAGTTCATCCCCTATCATTTGTGTTCACTACAAAGAGACATGAGCATCAACCATCTCTTACATTTGTGCATGGCTTCTACTAGTTGGATCTCTATTCTCAAACGGTGTGGTATTTCCTGGTGCATGCCCACAGATATTGTTGATCTCTTCTTTCTATTACTCGAGAGCAGCTACTTCCGGGGAAAGGTAAATTTATTTGGTAGAGCACTTAGCAAGATACTTCTATGGAATATTTGCCTTAAAAGGAACTGGAGAAACTTTAAAGAAAAACATGGGGATGTTTTGGAGTTCCTTAATATGTTCACTTTGTAGTTTGCTCGTGGTGTTCGATTGATATAGTTCTCTCCCACTATTCTTCTTTTCCTAATACTAATTCGTGGGCTTATCTCTGACCCATGTGGGCTTCAGGGTATGTGTTGAGTTGGGAGTGTTTGCTAAAGATTTTTTTTTTCAAGAGTTTAATTATTGTTGTAAGTACTTCAATGAAGGGGATCCAATAATGAACTTGTGTGCTTCTATAATCAAGTGAGATTAATACGAGAAAGTTTGTAAAGTTGGCAAGAGAAAATATGTGGAGAGAAAGTCGCGGTGTGAGTAATTGTCAGAGGGTGAGTAGTAAGAAAAGGCGCGACTAAGATTGTGAATTTTGTATATGCTGCCTTCTCTTCTTAAATTTAACATTGACAACGTTTAAGTTGACCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTCTGATAATGAATGGGGAACTTTTTGGCTGATGAATCTTTATGTTTCTATAATTTTAACGACTATTTAGCAAATCACCCTTGTGAAATTGATAGGTGGCAATACGTTTTAATTTTTGCCTCAACTTGTTATGTTCTTTCAAACTTACCAGCATCAGGTTTGAATCTGATCACTTGGAGGGAAACTAG

mRNA sequence

ATGATCGTCGTGGAGATGATGGACATTGAACACCGAAGGAAAGTTCAGAGAGAATGGTCAAAGAATCCAATGAAGTTTGCAGAGAAGATAGGAGAACGATTGCACCAATCAAGGTCTGAAGGCCTAAAAGTTATCTTCTTCCCTCTCTCTTGTTTGTCTCTGAATGCCCTTCGTCTCTTTATGCCATACCATCCATCTATTCTGATAACATTTGGATCTCTATTCTCAAACGGTGTGGTATTTCCTGGTGCATGCCCACAGATATTGTTGATCTCTTCTTTCTATTACTCGAGAGCAGCTACTTCCGGGGAAAGCATCAGGTTTGAATCTGATCACTTGGAGGGAAACTAG

Coding sequence (CDS)

ATGATCGTCGTGGAGATGATGGACATTGAACACCGAAGGAAAGTTCAGAGAGAATGGTCAAAGAATCCAATGAAGTTTGCAGAGAAGATAGGAGAACGATTGCACCAATCAAGGTCTGAAGGCCTAAAAGTTATCTTCTTCCCTCTCTCTTGTTTGTCTCTGAATGCCCTTCGTCTCTTTATGCCATACCATCCATCTATTCTGATAACATTTGGATCTCTATTCTCAAACGGTGTGGTATTTCCTGGTGCATGCCCACAGATATTGTTGATCTCTTCTTTCTATTACTCGAGAGCAGCTACTTCCGGGGAAAGCATCAGGTTTGAATCTGATCACTTGGAGGGAAACTAG

Protein sequence

MIVVEMMDIEHRRKVQREWSKNPMKFAEKIGERLHQSRSEGLKVIFFPLSCLSLNALRLFMPYHPSILITFGSLFSNGVVFPGACPQILLISSFYYSRAATSGESIRFESDHLEGN
Homology
The following BLAST results are available for this feature:
BLAST of Lcy06g001600.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy06g001600.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy06g001600.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy06g001600.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lcy06g001600Lcy06g001600gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy06g001600.1.exon1Lcy06g001600.1.exon1exon
Lcy06g001600.1.exon2Lcy06g001600.1.exon2exon
Lcy06g001600.1.exon3Lcy06g001600.1.exon3exon
Lcy06g001600.1.exon4Lcy06g001600.1.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy06g001600.1.cds1Lcy06g001600.1.cds1CDS
Lcy06g001600.1.cds2Lcy06g001600.1.cds2CDS
Lcy06g001600.1.cds3Lcy06g001600.1.cds3CDS
Lcy06g001600.1.cds4Lcy06g001600.1.cds4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lcy06g001600.1Lcy06g001600.1-proteinpolypeptide