Lcy05g017850.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy05g017850.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Tubulin glycylase
Location	Chr05: 33011182 .. 33014261 (+)
Sequence length	952
RNA-Seq Expression	Lcy05g017850.1
Synteny	Lcy05g017850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGACATTCCGGAATTTGCCACGACGTCGAACTTTTGCGCCCCTTCACGGCTTCATCAAGTCCGAGTCACCCACTGAACACACGAGACAAGTTTTCAGAATCGTGACTTGCTTTGATGTTCCCCACTCTCTTTTCCTCTGCAGAATAGTCTCTCGATATTGCTCAGACTTCAGAGAGACACATTTCGATTAAACTAATGGGTAAAATCATCGGTCTCTTTTCTCAATCGCTAAATTTGATCTATTTTTTTTCTCATTTCGAAGCGATTTTTTTCGTTTTTTAGGATCAGAAGCAGGGAAGTTGGGAATGGCGATGGAAGGAGTTGCTTCAATTGCAATTTTGCCTTGCGGCTCCATCTCTGGCCACTTCATTCAACTTCCTCACTCCATCTGCTACGGCCTCTATGGCACCGGTACGTTTCAGACCCATTTCCCCTGCTCTCTAGGCCTTTGGTTCTTTCAAGTTTCTGATTGTTTTCTTTGAAATAACATTGGAAATTCGACAATGAACCATGGTTAGTGGGTTCGGTATTTAGAGTTCGGAAATACTCTGTAACGAGGTTGAAAAATTGGGGAAATTAAAAGGTTGGATGAAATCTATCGGTTTTTTCTGATCTTGGTAATAGAAGATTTGTTTTAGCTTGATTACTTTTTTTTTTTTTTGATAAAGAACCAGCTTTCATGGTGAAAAAATGAAAGAGTTTTAGCTTGATTACTAGAGACCATATGAAGTACTGAATCTTTGAATTCTACATATGTTGAAGGTCTAAACTGGAACCTAATAGATTGGTCATTTGGTTGTGTCCTTAACAGTTTTTGTTTGAATTTTGGTAATGGATAAGATGTTTGATTTTGGTAATCCTAAACATGAAGTACTGAATCTTAGAATGCATGGTTTTTCTCTTTTCCTCCATGCCTAGTTTAAATTGCTATTGTGAAATCTCTGAGTTTGTTGATAATTTTGGCGTGAAATATTTGTCTTCCTCTCCTTTTTTTGGCTTCAAGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTTACAATTACGAACTACAATGTATGATATTGTTTGCCCCCTTTTGCTCCTTTACACCCAGCTGCTAAAATTTTATTCTCATGAGCAACTCTTAGTTTGTTGTTGTTTATTAACATTCTCATCCTTTTACATCTCCATTTTACATTTGTGTTTGAATATCAGAATAAGAAAGAACGAACGGTTGTTGTTGAATGTAGAGGCCACGATGCTGCACGGTTTCGCAGCATCGATCATGCTCATGGGTAAGTCCCAAGTTTCCAATAATTGCTGGAGAAACTCATTTTTCCTTCTTTACTTTGATGAGAAATTCAAGAATTCTTTTCTCTCCTTTCGCATCTTATCTCATTAATTTTCTCTTTTGTTATCCTCAACAACTTAAATGTTTGAGCTACTTTTCTAATCAAACAATTAAATTATCACCAGTTGCTATATTCTACTTTCACAACCTGATAAATTTTGACTCGTCAGTTGTCACGACCCTTAATCCATTGCCTTCTTGTTTGAACTGATTGTATTTTTGATTTGATGAACATCAGTAAGTTTATGGGTTTTTCGTATGGATGACCCATCTAAATAGGCAGAAATGATAAATGCCCTACCTTTTCAATTTAAGATTGTATGCTCTTTTGTTTGCATTAGTATCCTAGTAAAATTATCATTTTTTACTCTCTACTCTTACCTCGCTCTCTCTCGCTACTCTCGCTCTAACTTCTCGCTCTCTCTCCAATTTCTCTCTCCAATCTCTCGCTCTCTCTCTCCAATCTCTAGCTCTCTCTTCAATCTCGCTCCCTCTATTTTCTCTCTCCAATCCCTCGCTCTTCAATCTCGATCTCTCTCCAATCTCTCGCTCTCTTTCTCATTTCTCTCTCCAATCTTGCTCAAACCTCTCTCTAGTCCGGCTCTTGCTCCAATCTCTCGCTCACGTTGTGTGCTCTTTGGAGAGAGAAAAGGGAGGAAAAAATTGAGCGAGAAACGAGAGAGGGAAACAAGATGAGAGAAAAAATGTGTGTTTTCATGTAGAGAGTAAAAAGGTAATTTTGCTAGGATGATGATGTAAGTCAAAAGGACATATAACCTTAAATTGAAAAAGTAGGTCATTTTTCATTCGAACCTCTTGAAATAGGTCATCTACACATTTATCTCTAAGTTTATATCGTGTTTGTAGACAGTTGGGAAGAGGATGTAGTAAGCATGGTTGAAAAGAAGCATGGAAAGAGTGAGATTGTGATATCCTTCGAGTGTCAAACATTGAAGTCGGAGCAAGCGGCCGAAGATCATATCAGACAGTTTATTCCCAAATTAGTAGGCCAAGATGCTGTGGGTACGTGTGGCCAAATTCTTTCTATACCATCTTTGTTATGAAGCCTGTTTCTATAATTTCATGAAATAATCAAAGTAAAAGGATCTGCTAATTTCAATTACGAGTTCAAGCCTTCTTGCCAATCTGGTGAATGGCTTTTGCATACATTTCAATTTTACTAAAATAAGTTATTCAATAACAGTTAATAAACGATCACACAAAAAAATAAAAATGGAGCAATATGAAAGGTTAGAGATTCGATTCCTCACGTTTACATAAATAAAGACAGTTTTTCAAGAAAGCCCTTAACCTCACCATCCTTGAACGATGAAAATGTCTTTGAGAGTACAATCTTTGCACTGTATACTTTGCCAATTTCATTCTCACTGAAACTTTGAATGTGCAGTTAACATAGGGCCAATGAGCATCAGAGGATTGGACTTTGAAGCAGAGGAGCAGCGAGAGACCATTTGAAGCATTTTGAGTAGAGACTCGAATCTGATGAAGAAAGTCACTTTAAATCTTATTTTAACCCATGGCTTGTAAATTAAGGTCCCTTTGGCCGAGGGTGGCGACTGAATTTTGTTTGTCAGAGATTTCTCATGTTTCCATGCTAATTTTGAAGCTTTTGAGCTAGACTTTATCATGATAGAGAGAGAGACTCAACATCTTACATCAGTACTCGTTTCAAATTTTAGAATAATGACCAAAAGTTCACATGAG

mRNA sequence

GGGACATTCCGGAATTTGCCACGACGTCGAACTTTTGCGCCCCTTCACGGCTTCATCAAGTCCGAGTCACCCACTGAACACACGAGACAAGTTTTCAGAATCGTGACTTGCTTTGATGTTCCCCACTCTCTTTTCCTCTGCAGAATAGTCTCTCGATATTGCTCAGACTTCAGAGAGACACATTTCGATTAAACTAATGGGATCAGAAGCAGGGAAGTTGGGAATGGCGATGGAAGGAGTTGCTTCAATTGCAATTTTGCCTTGCGGCTCCATCTCTGGCCACTTCATTCAACTTCCTCACTCCATCTGCTACGGCCTCTATGGCACCGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTTACAATTACGAACTACAATAATAAGAAAGAACGAACGGTTGTTGTTGAATGTAGAGGCCACGATGCTGCACGGTTTCGCAGCATCGATCATGCTCATGGTTGGGAAGAGGATGTAGTAAGCATGGTTGAAAAGAAGCATGGAAAGAGTGAGATTGTGATATCCTTCGAGTGTCAAACATTGAAGTCGGAGCAAGCGGCCGAAGATCATATCAGACAGTTTATTCCCAAATTAGTAGGCCAAGATGCTGTGGTTAACATAGGGCCAATGAGCATCAGAGGATTGGACTTTGAAGCAGAGGAGCAGCGAGAGACCATTTGAAGCATTTTGAGTAGAGACTCGAATCTGATGAAGAAAGTCACTTTAAATCTTATTTTAACCCATGGCTTGTAAATTAAGGTCCCTTTGGCCGAGGGTGGCGACTGAATTTTGTTTGTCAGAGATTTCTCATGTTTCCATGCTAATTTTGAAGCTTTTGAGCTAGACTTTATCATGATAGAGAGAGAGACTCAACATCTTACATCAGTACTCGTTTCAAATTTTAGAATAATGACCAAAAGTTCACATGAG

Coding sequence (CDS)

ATGGGATCAGAAGCAGGGAAGTTGGGAATGGCGATGGAAGGAGTTGCTTCAATTGCAATTTTGCCTTGCGGCTCCATCTCTGGCCACTTCATTCAACTTCCTCACTCCATCTGCTACGGCCTCTATGGCACCGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTTACAATTACGAACTACAATAATAAGAAAGAACGAACGGTTGTTGTTGAATGTAGAGGCCACGATGCTGCACGGTTTCGCAGCATCGATCATGCTCATGGTTGGGAAGAGGATGTAGTAAGCATGGTTGAAAAGAAGCATGGAAAGAGTGAGATTGTGATATCCTTCGAGTGTCAAACATTGAAGTCGGAGCAAGCGGCCGAAGATCATATCAGACAGTTTATTCCCAAATTAGTAGGCCAAGATGCTGTGGTTAACATAGGGCCAATGAGCATCAGAGGATTGGACTTTGAAGCAGAGGAGCAGCGAGAGACCATTTGA

Protein sequence

MGSEAGKLGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQRETI

Homology

[Close]

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL
Match: A0A5D3DF47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00630 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 145/166 (87.35%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGSEAGKLGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRL 60
           +GS   K+GMAMEGVASIA+LPCGS+SGHFIQLPHSICYGL+GTELECERECSRGEDYRL
Sbjct: 15  VGSRGDKVGMAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRL 74

Query: 61  IKLTITNYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFEC 120
           IKLTITNYN K+ERTVVVECRGHDAARF SI HAHGWEEDVVSMVEKKHGK+EI++SFEC
Sbjct: 75  IKLTITNYNKKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFEC 134

Query: 121 QTLKSEQAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQRE 167
           Q LKSE+AAEDHIRQF+PKLVGQDAVVN+GPMSI GLDFEAEEQ E
Sbjct: 135 QMLKSEKAAEDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPE 180

[Close]

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL
Match: A0A0A0LAZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516480 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 141/155 (90.97%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 10  MAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYN 69
           MAMEGVASIA+LPCGS+SGHFIQLPHSICYGL+GTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 70  NKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAA 129
           NK+ERTVVVECRGHDAARF SI HAHGWEEDVVSMVEKKHGK+EI++SFECQ LKSE+AA
Sbjct: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120

Query: 130 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           EDHIRQF+PKLVGQDAVVN+GPMSI GLDFEAEEQ
Sbjct: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQ 155

[Close]

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL
Match: A0A6J1ERU0 (uncharacterized protein LOC111436977 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436977 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 142/155 (91.61%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 10  MAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYN 69
           MAMEGVASIA+LPCGS+SGHFIQLPH +CYGL+GTELECERECSRGEDYRLIKLTITNYN
Sbjct: 11  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 70

Query: 70  NKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAA 129
           NK+ERTVVVE RGHDAARFRSI HAHGWEEDVV MVEKKHGK++I+ISFECQTLKSEQAA
Sbjct: 71  NKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAA 130

Query: 130 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           EDHIRQFIPKLVGQDAVVN+GPMSIRGLDFEAEEQ
Sbjct: 131 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ 165

[Close]

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL
Match: A0A6J1EVL3 (uncharacterized protein LOC111436977 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436977 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 142/155 (91.61%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 10  MAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYN 69
           MAMEGVASIA+LPCGS+SGHFIQLPH +CYGL+GTELECERECSRGEDYRLIKLTITNYN
Sbjct: 13  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 72

Query: 70  NKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAA 129
           NK+ERTVVVE RGHDAARFRSI HAHGWEEDVV MVEKKHGK++I+ISFECQTLKSEQAA
Sbjct: 73  NKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAA 132

Query: 130 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           EDHIRQFIPKLVGQDAVVN+GPMSIRGLDFEAEEQ
Sbjct: 133 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ 167

[Close]

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL
Match: A0A6J1CTN4 (uncharacterized protein LOC111014113 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014113 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.9e-77
Identity = 143/169 (84.62%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 2   GSEAGK------LGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRG 61
           GSE G       + MAMEGVASIA+LPCGS+SGHFIQLPHSICYGL+GTELECERECSRG
Sbjct: 4   GSEVGSKEMAMAMAMAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRG 63

Query: 62  EDYRLIKLTITNYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIV 121
           EDYRLIKLTITNYNNKKE+TVVVE RGHDAARF SI+HAHGWEEDVVS+V+KKHGK+++ 
Sbjct: 64  EDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKHGKNQVA 123

Query: 122 ISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           ISFECQTLKSEQAAE+HIRQFIPKL GQDAVVNIGPMSI+GLDFEAEEQ
Sbjct: 124 ISFECQTLKSEQAAEEHIRQFIPKLAGQDAVVNIGPMSIKGLDFEAEEQ 172

[Close]

BLAST of Lcy05g017850.1 vs. NCBI nr
Match: KAA0060329.1 (uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa] >TYK22078.1 uncharacterized protein E5676_scaffold318G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 2.9e-79
Identity = 145/166 (87.35%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGSEAGKLGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRL 60
           +GS   K+GMAMEGVASIA+LPCGS+SGHFIQLPHSICYGL+GTELECERECSRGEDYRL
Sbjct: 15  VGSRGDKVGMAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRL 74

Query: 61  IKLTITNYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFEC 120
           IKLTITNYN K+ERTVVVECRGHDAARF SI HAHGWEEDVVSMVEKKHGK+EI++SFEC
Sbjct: 75  IKLTITNYNKKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFEC 134

Query: 121 QTLKSEQAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQRE 167
           Q LKSE+AAEDHIRQF+PKLVGQDAVVN+GPMSI GLDFEAEEQ E
Sbjct: 135 QMLKSEKAAEDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPE 180

[Close]

BLAST of Lcy05g017850.1 vs. NCBI nr
Match: XP_038877383.1 (uncharacterized protein LOC120069678 [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 8.5e-79
Identity = 143/156 (91.67%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 10  MAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYN 69
           MAMEGVASIA+LPCGS+SGHFIQLPHSICYGL+GTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 70  NKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAA 129
           NK+ERTVV+ECRGHDAARFRSI HAHGWEEDVVSMVEKKHGK+EI++SFECQ LKSE+AA
Sbjct: 61  NKQERTVVIECRGHDAARFRSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQILKSEKAA 120

Query: 130 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQR 166
           EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEE++
Sbjct: 121 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEEQ 156

[Close]

BLAST of Lcy05g017850.1 vs. NCBI nr
Match: XP_023515562.1 (uncharacterized protein LOC111779684 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 9.4e-78
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 7   KLGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTIT 66
           K+ MAMEGVASIA+LPCGS+SGHFIQLPH +CYGL+GTELECERECSRGEDYRLIKLTIT
Sbjct: 8   KVRMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTIT 67

Query: 67  NYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSE 126
           NYNNK+ERTVVVE RGHDAARFRSI HAHGWEEDVV MVEKKHGK++I+ISFECQTLKSE
Sbjct: 68  NYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSE 127

Query: 127 QAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           QAAEDHIRQFIPKLVGQDAVVN+GPMSIRGLDFEAEEQ
Sbjct: 128 QAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ 165

[Close]

BLAST of Lcy05g017850.1 vs. NCBI nr
Match: XP_023515561.1 (uncharacterized protein LOC111779684 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 9.4e-78
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 7   KLGMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTIT 66
           K+ MAMEGVASIA+LPCGS+SGHFIQLPH +CYGL+GTELECERECSRGEDYRLIKLTIT
Sbjct: 10  KVRMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTIT 69

Query: 67  NYNNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSE 126
           NYNNK+ERTVVVE RGHDAARFRSI HAHGWEEDVV MVEKKHGK++I+ISFECQTLKSE
Sbjct: 70  NYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSE 129

Query: 127 QAAEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           QAAEDHIRQFIPKLVGQDAVVN+GPMSIRGLDFEAEEQ
Sbjct: 130 QAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ 167

[Close]

BLAST of Lcy05g017850.1 vs. NCBI nr
Match: XP_022930568.1 (uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 142/155 (91.61%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 10  MAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNYN 69
           MAMEGVASIA+LPCGS+SGHFIQLPH +CYGL+GTELECERECSRGEDYRLIKLTITNYN
Sbjct: 13  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 72

Query: 70  NKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQAA 129
           NK+ERTVVVE RGHDAARFRSI HAHGWEEDVV MVEKKHGK++I+ISFECQTLKSEQAA
Sbjct: 73  NKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAA 132

Query: 130 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           EDHIRQFIPKLVGQDAVVN+GPMSIRGLDFEAEEQ
Sbjct: 133 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ 167

[Close]

BLAST of Lcy05g017850.1 vs. TAIR 10
Match: AT3G29280.1 (unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 254.2 bits (648), Expect = 7.2e-68
Identity = 114/156 (73.08%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 9   GMAMEGVASIAILPCGSISGHFIQLPHSICYGLYGTELECERECSRGEDYRLIKLTITNY 68
           G   EGVASIA+LPCG+ISGHFIQ+P SICYGL+GTEL CE ECSRGEDYRLIKLTI +Y
Sbjct: 19  GEVKEGVASIALLPCGTISGHFIQMPSSICYGLHGTELACETECSRGEDYRLIKLTIIDY 78

Query: 69  NNKKERTVVVECRGHDAARFRSIDHAHGWEEDVVSMVEKKHGKSEIVISFECQTLKSEQA 128
           N KKE+TVVVEC+GHDAAR   ++HAHGWEEDV+ +VE+KHGK ++ +SFEC+TLK+++A
Sbjct: 79  NRKKEQTVVVECKGHDAARINDVEHAHGWEEDVIGLVEEKHGKKKVSVSFECETLKADEA 138

Query: 129 AEDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEQ 165
           AEDHIRQF+PKL G DAV+NIGPM I GLDF A E+
Sbjct: 139 AEDHIRQFMPKLAGLDAVINIGPMKISGLDFAAVEE 174

The following BLAST results are available for this feature:

BLAST of Lcy05g017850.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g017850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DF47	1.4e-79	87.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LAZ2	1.3e-77	90.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516480 PE=4 SV=1	[more]
A0A6J1ERU0	1.3e-77	91.61	uncharacterized protein LOC111436977 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EVL3	1.3e-77	91.61	uncharacterized protein LOC111436977 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CTN4	3.9e-77	84.62	uncharacterized protein LOC111014113 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lcy05g017850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060329.1	2.9e-79	87.35	uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_038877383.1	8.5e-79	91.67	uncharacterized protein LOC120069678 [Benincasa hispida]	[more]
XP_023515562.1	9.4e-78	90.51	uncharacterized protein LOC111779684 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023515561.1	9.4e-78	90.51	uncharacterized protein LOC111779684 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022930568.1	2.7e-77	91.61	uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy05g017850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29280.1	7.2e-68	73.08	unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37738	OS03G0209700 PROTEIN	coord: 7..165

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy05g017850	Lcy05g017850	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy05g017850.1.utr5p1	Lcy05g017850.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy05g017850.1.exon1	Lcy05g017850.1.exon1	exon
Lcy05g017850.1.exon2	Lcy05g017850.1.exon2	exon
Lcy05g017850.1.exon3	Lcy05g017850.1.exon3	exon
Lcy05g017850.1.exon4	Lcy05g017850.1.exon4	exon
Lcy05g017850.1.exon5	Lcy05g017850.1.exon5	exon
Lcy05g017850.1.exon6	Lcy05g017850.1.exon6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy05g017850.1.cds1	Lcy05g017850.1.cds1	CDS
Lcy05g017850.1.cds2	Lcy05g017850.1.cds2	CDS
Lcy05g017850.1.cds3	Lcy05g017850.1.cds3	CDS
Lcy05g017850.1.cds4	Lcy05g017850.1.cds4	CDS
Lcy05g017850.1.cds5	Lcy05g017850.1.cds5	CDS
Lcy05g017850.1.cds6	Lcy05g017850.1.cds6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy05g017850.1.utr3p1	Lcy05g017850.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy05g017850.1	Lcy05g017850.1-protein	polypeptide