Lcy03g000970.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTCAGTACTCGGCGAAAGGTCAATAGAGTTCGAGGCCCGATGGATGGCAGAGGAAGATGGATAGAAGATGATGCAGGTATGGAGAATATTACAAATCAATATTTTCAAAATCTATTCCAAACTTCTAACCCCAACATGGACTCAATTGAGTTTATTTTGGTAGCAATCCCTATCGGTATCATGGATGAGCAAAATAAGGTGTTGTTGAAGGACTTTACTCGAGAAAAAATCTATATGGTGATAAAGAATATGCACCCTTCTAAGGCCCAGGACCAGATGGGATCCAGGCAATTGTTTATAAAAAAATATTGGGATATCATTGGAGAGGAGGTTTGTGATTTTTGCTCAGATGTCTTAAATGGAGAAGGATCTTTAAGTCAAGTTAATAAAACCTATATAGCGTCAATTCCAAAGACCAAAGATCCTTGCAATATGAAGGATTTTCCCCCCATTAGTCTATGTTCAGTCATTTACAAAATAATTGCTAAGGCTCTAGCCAACAGATTGAGAACAGTGTTAGATAAGATCATCTCCCCTAGTTAATCAGCTTTTGTGTCGGGAAGAATCATCTCTAATAATACTGTGATCGGGTTTGAATGCCTCCATGCAATAAAGAACAAAAGAGGTGGAAAAGGAGGTGTAGTTGCGCTTAAGTTAGATATGAGCAAAGCGTATGATCAAGTGGAATAGAGCTATATAAGGGAGGTTATGAGCAAGATGGGATTTGACAGAAGATGGATTGACAAAATAATGAAGTGCGTGGAGTCATTGAGCTTCCAAGTTCTCCTCAATAGGATACCTCGAGTAGAATTCAAACCAAATCGAGGTCATAGGCAAGAGGATCCTTTATCTTCATATCTATTCTTGATTTTTGTTGAGAGCCTATCGAGTATCCTTATTAATTTAGAAAGGAGGAAAGAGTTATTAGGTTTGCGTATCAATAATTATTGTCCTTCTATAACACATCTCTAATCTGCTGATGATAGTCTTTTGTTCTTTAAAGTTGTGGAAATAGATTGTAGGTCTATTAAAAGGCTTCTCTATAACTATGAAAGGGCGTCGGGACAAACCATTAATTTTGAGAAATCATCTTTTATGGTGAGTCTGAACACGAATCCAGACCAAGTTGACAAGATCAAGGAGCTTCTAGGAGTCCAATATAAGGAAAGTTTGGGTCAATACCTAGGCCTTTCGTCTCAAATTGGCAAGAGTAAGAAGGAAGTTTTTGACAACATCAAAGATTGA ATGACAGTCAGTACTCGGCGAAAGGTCAATAGAGTTCGAGGCCCGATGGATGGCAGAGGAAGATGGATAGAAGATGATGCAGTTGTGGAAATAGATTGTAGGTCTATTAAAAGGCTTCTCTATAACTATGAAAGGGCGTCGGGACAAACCATTAATTTTGAGAAATCATCTTTTATGGTGAGTCTGAACACGAATCCAGACCAAGTTGACAAGATCAAGGAGCTTCTAGGAGTCCAATATAAGGAAAGTTTGGGTCAATACCTAGGCCTTTCGTCTCAAATTGGCAAGAGTAAGAAGGAAGTTTTTGACAACATCAAAGATTGA ATGACAGTCAGTACTCGGCGAAAGGTCAATAGAGTTCGAGGCCCGATGGATGGCAGAGGAAGATGGATAGAAGATGATGCAGTTGTGGAAATAGATTGTAGGTCTATTAAAAGGCTTCTCTATAACTATGAAAGGGCGTCGGGACAAACCATTAATTTTGAGAAATCATCTTTTATGGTGAGTCTGAACACGAATCCAGACCAAGTTGACAAGATCAAGGAGCTTCTAGGAGTCCAATATAAGGAAAGTTTGGGTCAATACCTAGGCCTTTCGTCTCAAATTGGCAAGAGTAAGAAGGAAGTTTTTGACAACATCAAAGATTGA MTVSTRRKVNRVRGPMDGRGRWIEDDAVVEIDCRSIKRLLYNYERASGQTINFEKSSFMVSLNTNPDQVDKIKELLGVQYKESLGQYLGLSSQIGKSKKEVFDNIKD Homology
BLAST of Lcy03g000970.1 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.6e-14 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. ExPASy TrEMBL
Match: A0A2N9GTH0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30581 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 9.9e-10 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. ExPASy TrEMBL
Match: A0A2N9ELM3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3493 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09 Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. ExPASy TrEMBL
Match: A0A5B6UMS8 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_018051 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.2e-09 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. ExPASy TrEMBL
Match: A0A2Z6N029 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_226660 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia]) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-13 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. NCBI nr
Match: XP_012472310.1 (PREDICTED: uncharacterized protein LOC105789486 [Gossypium raimondii]) HSP 1 Score: 73.9 bits (180), Expect = 9.2e-10 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. NCBI nr
Match: XP_012087680.1 (uncharacterized protein LOC105646435 [Jatropha curcas]) HSP 1 Score: 72.8 bits (177), Expect = 2.0e-09 Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. NCBI nr
Match: KAA3454975.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 71.6 bits (174), Expect = 4.5e-09 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Lcy03g000970.1 vs. NCBI nr
Match: XP_019089129.1 (PREDICTED: uncharacterized protein LOC109127959 [Camelina sativa]) HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09 Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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